Prupe.1G041000_v2.0.a1

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013320
Physical Location & Seq
Forward (+)
2937408 .. 2939046
1639 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G041000.2

Sequence Viewer

Length: 1029 bp
ATGGGAACCTTGTTCCTGGACCATATCAAAAACAAGGCATCAAATTTTCTACTAGAGAAATACAAAACTGCTAGGCTGACTTTTACTGATGTTACTCAAGTTGAACTGTTGGCTGAGGAAGCAACAAATGGAGATCCATGTAGCCCGGATGCTAAAACAATGACTCAAATAGCTGCTGCCTCCTTTGAGATGGATGACTATTGGAGAGTTGTTGATATCCTTCACCGAAGGTTATATAACATAGATTGGAAAGAATGGAGGCAATCCTACAAAGCATTGGTACTTCTGGAGTTCTTACTAACACATGGTCCTGAAGAGTTTGCTGACGAATTTCAATGCGATATCGATGTCGTCCAAGAGCTGGGAACCTTTAAATACATAGATAAGACAGGATTCAATTGGGGTGTTTGCATGCAAAAGAAATCAGACCAAATCCAAAACCTTCTAGGAGGAGGACAACCACTCAGAGAAGCACGTTTGAAAGCTCTCAGAATAACAAATGAAATCCAAGGGTTTGGAAGCGCAACGCCTTCTCCTTCATCCTTAACTCCTTCCTCTTCATCATCTTCCGAAGCATCAAGAGCATCGTTTGCCTCATTTTCTACCACAAGTTCTGTATGGAATGACATGAATGAGCTTAGCAAGGGTTACCAAGAACCATCACCCACAAAGTTAGAAGCCATGGAGAGCCATTCACCGGGTGGAATACGTAATGATTACGATAACAAGACTTGCAATTTCCTAGCAAGTACAAGTGAAAATATTGAAGGACAGCTTTGGGGTTGCCCTCCAATCCAAGAAAAAGGCTCGTTGCTCGAATCCAAAGACGAAGAGGATGCAGATGATTATGATGATTTAGAGTATTTTGAGAAGGCACCAGATGGTAATTTTATAAGTGGGATGTTCTCAAAGCTGGTTAACATTAGTCCTCCAAGAGCTCATGGTAAGAAAGTTGGGTTTAGGAGTGTTTCTGGTGTGGGAAGGGAGGGCAAGAAAAGGTTTGATCGCCAATATTCGCTTTGGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

343

Amino Acids

38.48

Weight (kDa)

4.99

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013320)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23350 AT3G23350
fragaria_vesca FvH4_4g03870
malus_domestica MD13G1215900.v1.1
prunus_persica Prupe.1G041000_v2.0.a1 Prupe.1G041000_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0393891
rosa_laevigata RLG00000009729
rosa_multiflora Rmu_sc0000928.1_g000029
rosa_roxburghii Rroxscaffold_5G00338970
rosa_rugosa Rorug03G0371200 Rorug03G0371200
rosa_samantha Rh4AG049300 Rh4BG045600 Rh4BG045700 Rh4CG052800 Rh4DG046300
rosa_wichuraiana Rw4G003900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 893
AccB1I GGYRCC 1 cut(s) 874
AccB7I CCANNNNNTGG 1 cut(s) 361
AclWI GGATC 1 cut(s) 128
AcsI RAATTY 2 cut(s) 43, 329
AcuI CTGAAG 1 cut(s) 333
AdeI CACNNNGTG 1 cut(s) 701
AfaI GTAC 2 cut(s) 282, 751
AfiI CCNNNNNNNGG 2 cut(s) 361, 697
AgsI TTSAA 5 cut(s) 104, 335, 397, 481, 767
AjnI CCWGG 1 cut(s) 15
AluBI AGCT 7 cut(s) 173, 361, 485, 637, 775, 913, 938
AluI AGCT 7 cut(s) 173, 361, 485, 637, 775, 913, 938
Alw21I GWGCWC 1 cut(s) 940
AlwI GGATC 1 cut(s) 128
ApeKI GCWGC 2 cut(s) 173, 176
ApoI RAATTY 2 cut(s) 43, 329
AspLEI GCGC 1 cut(s) 524
AspS9I GGNCC 2 cut(s) 19, 308
AsuC2I CCSGG 2 cut(s) 146, 699
AsuHPI GGTGA 3 cut(s) 215, 654, 687
AvaII GGWCC 2 cut(s) 19, 308
BanI GGYRCC 1 cut(s) 874
BanII GRGCYC 1 cut(s) 940
Bbv12I GWGCWC 1 cut(s) 940
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 2 cut(s) 160, 163
BccI CCATC 3 cut(s) 184, 667, 875
BcgI CGANNNNNNTGC 2 cut(s) 818, 852
BciT130I CCWGG 1 cut(s) 17
BcnI CCSGG 2 cut(s) 146, 699
BfaI CTAG 4 cut(s) 53, 72, 446, 743
BisI GCNGC 2 cut(s) 174, 177
BlpI GCTNAGC 1 cut(s) 638
BlsI GCNGC 2 cut(s) 175, 178
Bme1390I CCNGG 3 cut(s) 17, 146, 699
Bme18I GGWCC 2 cut(s) 19, 308
BmgT120I GGNCC 2 cut(s) 19, 308
BmiI GGNNCC 3 cut(s) 7, 367, 876
BmrFI CCNGG 3 cut(s) 17, 146, 699
BmsI GCATC 5 cut(s) 47, 139, 584, 593, 826
BpmI CTGGAG 1 cut(s) 308
Bpu10I CCTNAGC 1 cut(s) 114
Bpu1102I GCTNAGC 1 cut(s) 638
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 2 cut(s) 146, 699
Bsa29I ATCGAT 1 cut(s) 345
BsaAI YACGTR 1 cut(s) 710
BsaJI CCNNGG 2 cut(s) 508, 681
BsaXI ACNNNNNCTCC 2 cut(s) 517, 547
Bsc4I CCNNNNNNNGG 2 cut(s) 361, 697
BseBI CCWGG 1 cut(s) 17
BseCI ATCGAT 1 cut(s) 345
BseDI CCNNGG 2 cut(s) 508, 681
BseGI GGATG 5 cut(s) 154, 199, 539, 841, 906
BseLI CCNNNNNNNGG 2 cut(s) 361, 697
BseMII CTCAG 3 cut(s) 105, 478, 502
BseRI GAGGAG 1 cut(s) 465
BseXI GCAGC 2 cut(s) 160, 163
BseYI CCCAGC 1 cut(s) 361
BshNI GGYRCC 1 cut(s) 874
BshVI ATCGAT 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 940
BsiSI CCGG 2 cut(s) 146, 698
BslI CCNNNNNNNGG 2 cut(s) 361, 697
Bsp1286I GDGCHC 1 cut(s) 940
Bsp143I GATC 2 cut(s) 133, 1003
Bsp1720I GCTNAGC 1 cut(s) 638
Bsp19I CCATGG 1 cut(s) 681
BspCNI CTCAG 3 cut(s) 106, 477, 501
BspDI ATCGAT 1 cut(s) 345
BspLI GGNNCC 3 cut(s) 7, 367, 876
BspPI GGATC 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 874
BssECI CCNNGG 2 cut(s) 508, 681
BssMI GATC 2 cut(s) 133, 1003
BssT1I CCWWGG 2 cut(s) 508, 681
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 1 cut(s) 108
Bst6I CTCTTC 3 cut(s) 309, 562, 825
BstAPI GCANNNNNTGC 1 cut(s) 590
BstBAI YACGTR 1 cut(s) 710
BstC8I GCNNGC 1 cut(s) 413
BstDEI CTNAG 4 cut(s) 114, 464, 488, 638
BstDSI CCRYGG 1 cut(s) 681
BstEII GGTNACC 1 cut(s) 647
BstF5I GGATG 5 cut(s) 154, 199, 539, 841, 906
BstHHI GCGC 1 cut(s) 524
BstKTI GATC 2 cut(s) 136, 1006
BstMBI GATC 2 cut(s) 133, 1003
BstMWI GCNNNNNNNGC 3 cut(s) 119, 581, 590
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 415
BstPI GGTNACC 1 cut(s) 647
BstSCI CCNGG 3 cut(s) 15, 144, 697
BstSNI TACGTA 1 cut(s) 710
BstV1I GCAGC 2 cut(s) 160, 163
BstX2I RGATCY 1 cut(s) 133
BstXI CCANNNNNNTGG 1 cut(s) 515
BstYI RGATCY 1 cut(s) 133
Bsu15I ATCGAT 1 cut(s) 345
BsuTUI ATCGAT 1 cut(s) 345
BtgI CCRYGG 1 cut(s) 681
BtsCI GGATG 5 cut(s) 154, 199, 539, 841, 906
Cac8I GCNNGC 1 cut(s) 413
CfoI GCGC 1 cut(s) 524
Cfr13I GGNCC 2 cut(s) 19, 308
ClaI ATCGAT 1 cut(s) 345
Csp6I GTAC 2 cut(s) 281, 750
CviAII CATG 6 cut(s) 138, 305, 412, 628, 682, 941
CviQI GTAC 2 cut(s) 281, 750
DdeI CTNAG 4 cut(s) 114, 464, 488, 638
DpnI GATC 2 cut(s) 135, 1005
DpnII GATC 2 cut(s) 133, 1003
DraI TTTAAA 1 cut(s) 373
DraIII CACNNNGTG 1 cut(s) 701
Eam1104I CTCTTC 3 cut(s) 309, 562, 825
EarI CTCTTC 3 cut(s) 309, 562, 825
Ecl136II GAGCTC 1 cut(s) 938
Eco105I TACGTA 1 cut(s) 710
Eco130I CCWWGG 2 cut(s) 508, 681
Eco24I GRGCYC 1 cut(s) 940
Eco32I GATATC 2 cut(s) 217, 343
Eco47I GGWCC 2 cut(s) 19, 308
Eco53kI GAGCTC 1 cut(s) 938
Eco57I CTGAAG 1 cut(s) 333
Eco91I GGTNACC 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 938
EcoO65I GGTNACC 1 cut(s) 647
EcoRII CCWGG 1 cut(s) 15
EcoRV GATATC 2 cut(s) 217, 343
EcoT14I CCWWGG 2 cut(s) 508, 681
EcoT38I GRGCYC 1 cut(s) 940
ErhI CCWWGG 2 cut(s) 508, 681
FaeI CATG 6 cut(s) 141, 308, 415, 631, 685, 944
FalI AAGNNNNNCTT 2 cut(s) 759, 791
FatI CATG 6 cut(s) 137, 304, 411, 627, 681, 940
Fnu4HI GCNGC 2 cut(s) 174, 177
FokI GGATG 5 cut(s) 161, 206, 526, 848, 913
FriOI GRGCYC 1 cut(s) 940
Fsp4HI GCNGC 2 cut(s) 174, 177
FspBI CTAG 4 cut(s) 53, 72, 446, 743
GlaI GCGC 1 cut(s) 523
GluI GCNGC 2 cut(s) 174, 177
GsaI CCCAGC 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 308
HapII CCGG 2 cut(s) 146, 698
HhaI GCGC 1 cut(s) 524
Hin1II CATG 6 cut(s) 141, 308, 415, 631, 685, 944
Hin6I GCGC 1 cut(s) 522
HinP1I GCGC 1 cut(s) 522
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HinfI GANTC 3 cut(s) 163, 393, 818
HpaI GTTAAC 1 cut(s) 919
HpaII CCGG 2 cut(s) 146, 698
HphI GGTGA 3 cut(s) 215, 654, 687
Hpy166II GTNNAC 1 cut(s) 919
Hpy188I TCNGA 4 cut(s) 427, 467, 491, 571
Hpy188III TCNNGA 3 cut(s) 287, 311, 579
Hpy8I GTNNAC 1 cut(s) 919
HpyAV CCTTC 9 cut(s) 222, 230, 452, 540, 546, 561, 761, 865, 975
HpyCH4III ACNGT 1 cut(s) 108
HpyCH4IV ACGT 2 cut(s) 475, 709
HpyCH4V TGCA 4 cut(s) 411, 415, 735, 839
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 581, 590
HpyF3I CTNAG 4 cut(s) 114, 464, 488, 638
HpySE526I ACGT 2 cut(s) 475, 709
Hsp92II CATG 6 cut(s) 141, 308, 415, 631, 685, 944
HspAI GCGC 1 cut(s) 522
KspAI GTTAAC 1 cut(s) 919
Kzo9I GATC 2 cut(s) 133, 1003
Lsp1109I GCAGC 2 cut(s) 160, 163
LweI GCATC 5 cut(s) 47, 139, 584, 593, 826
MaeI CTAG 4 cut(s) 53, 72, 446, 743
MaeII ACGT 2 cut(s) 475, 709
MaeIII GTNAC 2 cut(s) 91, 647
MalI GATC 2 cut(s) 135, 1005
MboI GATC 2 cut(s) 133, 1003
MboII GAAGA 4 cut(s) 326, 549, 558, 842
MfeI CAATTG 1 cut(s) 397
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 940
MluCI AATT 5 cut(s) 43, 329, 397, 736, 886
MlyI GAGTC 1 cut(s) 157
MseI TTAA 3 cut(s) 372, 545, 918
MspI CCGG 2 cut(s) 146, 698
MspR9I CCNGG 3 cut(s) 17, 146, 699
MunI CAATTG 1 cut(s) 397
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 3 cut(s) 119, 581, 590
NciI CCSGG 2 cut(s) 146, 699
NcoI CCATGG 1 cut(s) 681
NdeII GATC 2 cut(s) 133, 1003
NlaIII CATG 6 cut(s) 141, 308, 415, 631, 685, 944
NlaIV GGNNCC 3 cut(s) 7, 367, 876
NspI RCATGY 1 cut(s) 415
PaeI GCATGC 1 cut(s) 415
PfeI GAWTC 2 cut(s) 393, 818
PflMI CCANNNNNTGG 1 cut(s) 361
PfoI TCCNGGA 1 cut(s) 15
PkrI GCNGC 2 cut(s) 175, 178
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
Ppu21I YACGTR 1 cut(s) 710
PsiI TTATAA 1 cut(s) 893
Psp124BI GAGCTC 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 15
PspEI GGTNACC 1 cut(s) 647
PspFI CCCAGC 1 cut(s) 361
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 3 cut(s) 7, 367, 876
PspPI GGNCC 2 cut(s) 19, 308
PsuI RGATCY 1 cut(s) 133
RsaI GTAC 2 cut(s) 282, 751
RsaNI GTAC 2 cut(s) 281, 750
SacI GAGCTC 1 cut(s) 940
SaqAI TTAA 3 cut(s) 372, 545, 918
SatI GCNGC 2 cut(s) 174, 177
Sau3AI GATC 2 cut(s) 133, 1003
Sau96I GGNCC 2 cut(s) 19, 308
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 3 cut(s) 17, 146, 699
SduI GDGCHC 1 cut(s) 940
SfaNI GCATC 5 cut(s) 47, 139, 584, 593, 826
SinI GGWCC 2 cut(s) 19, 308
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SnaBI TACGTA 1 cut(s) 710
SphI GCATGC 1 cut(s) 415
Sse9I AATT 5 cut(s) 43, 329, 397, 736, 886
SspI AATATT 2 cut(s) 763, 1013
SspMI CTAG 4 cut(s) 53, 72, 446, 743
SstI GAGCTC 1 cut(s) 940
StyD4I CCNGG 3 cut(s) 15, 144, 697
StyI CCWWGG 2 cut(s) 508, 681
TaaI ACNGT 1 cut(s) 108
TaiI ACGT 2 cut(s) 478, 712
TaqI TCGA 2 cut(s) 345, 816
TasI AATT 5 cut(s) 43, 329, 397, 736, 886
TatI WGTACW 1 cut(s) 749
TfiI GAWTC 2 cut(s) 393, 818
Tru1I TTAA 3 cut(s) 372, 545, 918
Tru9I TTAA 3 cut(s) 372, 545, 918
TseI GCWGC 2 cut(s) 173, 176
TspDTI ATGAA 4 cut(s) 516, 528, 549, 644
Van91I CCANNNNNTGG 1 cut(s) 361
VpaK11BI GGWCC 2 cut(s) 19, 308
XapI RAATTY 2 cut(s) 43, 329
XceI RCATGY 1 cut(s) 415
XcmI CCANNNNNNNNNTGG 1 cut(s) 698
XspI CTAG 4 cut(s) 53, 72, 446, 743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.