Rh4BG045700

ENTH domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
8314873 .. 8315502
630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG045700.1

Sequence Viewer

Length: 630 bp
ATGCAAAAGAAATCGGACCAAATACTAATCCTTCTAAGAGGGGGGCGGTCGACGCTGAGAGAAGCACGTTTCAAAGCTCTCAAAGTAACAAATGAAATCCAAGGCTTTAGAGGTTCAGCGTCTTCTCCTTCACCCTCAACTCCTTCCTCTGCCTACTCTGAAACACCAAGAGCTTCATCCTTTAGTTCATTTTCTACCACAAGTTCTGTATGGAATGAATTGAACAATGAGCTTAGCAAATTTCATCAACCATCGACAACTAAATCAGAAGCCATGGAAAGCTATTCACAGGGTGGACTGCGAGACACTGATGATGATCATGATCATTACAAGAATACTAGCAATTTCCCCGCACCAAGTGAGAGTAGGGAAGGATCACACCTTTGGAATTGCCCTCCAATTGATGAAAAAGGTTCATTACTTGAATCCGAAGAAGAAGACAATGAGGATGATGACAAATATTATGAAAAGGAGGATGGTATTTTAAGTGGAATTTACTCTAAGCTGGTTACCCTTAGTCCTACAAGAGGAAATGTACCTCATGGTAATATTAGGTTTAGGAGTGTTTCTGATGTAGGGAGGGAGCTGAGGAAGAAAAAGCTTGATCGCCAATCTTCGTTTTGGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

209

Amino Acids

23.54

Weight (kDa)

5.79

Isoelectric Point (pI)

58.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013320)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 50
AciI CCGC 2 cut(s) 46, 351
AclWI GGATC 1 cut(s) 382
AcsI RAATTY 2 cut(s) 239, 492
AdeI CACNNNGTG 2 cut(s) 293, 359
AfaI GTAC 2 cut(s) 537, 626
AfiI CCNNNNNNNGG 1 cut(s) 527
AgsI TTSAA 3 cut(s) 73, 223, 425
AluBI AGCT 7 cut(s) 77, 173, 232, 282, 505, 586, 601
AluI AGCT 7 cut(s) 77, 173, 232, 282, 505, 586, 601
Alw26I GTCTC 1 cut(s) 297
AlwI GGATC 1 cut(s) 382
ApoI RAATTY 2 cut(s) 239, 492
AspS9I GGNCC 1 cut(s) 16
AsuHPI GGTGA 1 cut(s) 123
AvaII GGWCC 1 cut(s) 16
BbsI GAAGAC 2 cut(s) 114, 444
BbvCI CCTCAGC 1 cut(s) 587
BccI CCATC 2 cut(s) 259, 470
BclI TGATCA 2 cut(s) 316, 322
BcoDI GTCTC 1 cut(s) 297
BfaI CTAG 1 cut(s) 339
BlpI GCTNAGC 1 cut(s) 233
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 1 cut(s) 16
BpiI GAAGAC 2 cut(s) 114, 444
Bpu10I CCTNAGC 1 cut(s) 587
Bpu1102I GCTNAGC 1 cut(s) 233
BsaBI GATNNNNATC 2 cut(s) 315, 321
BsaJI CCNNGG 2 cut(s) 100, 273
Bsc4I CCNNNNNNNGG 1 cut(s) 527
Bse8I GATNNNNATC 2 cut(s) 315, 321
BseDI CCNNGG 2 cut(s) 100, 273
BseGI GGATG 3 cut(s) 176, 454, 481
BseJI GATNNNNATC 2 cut(s) 315, 321
BseLI CCNNNNNNNGG 1 cut(s) 527
BseMII CTCAG 2 cut(s) 47, 578
Bsh1285I CGRYCG 1 cut(s) 50
BsiEI CGRYCG 1 cut(s) 50
BslI CCNNNNNNNGG 1 cut(s) 527
BsmAI GTCTC 1 cut(s) 297
Bsp143I GATC 4 cut(s) 316, 322, 374, 604
Bsp1720I GCTNAGC 1 cut(s) 233
Bsp19I CCATGG 1 cut(s) 273
BspACI CCGC 2 cut(s) 46, 351
BspCNI CTCAG 2 cut(s) 48, 579
BspHI TCATGA 1 cut(s) 319
BspPI GGATC 1 cut(s) 382
BssECI CCNNGG 2 cut(s) 100, 273
BssMI GATC 4 cut(s) 316, 322, 374, 604
BssT1I CCWWGG 2 cut(s) 100, 273
BstDEI CTNAG 6 cut(s) 35, 56, 233, 501, 515, 587
BstDSI CCRYGG 1 cut(s) 273
BstEII GGTNACC 1 cut(s) 508
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 3 cut(s) 176, 454, 481
BstKTI GATC 4 cut(s) 319, 325, 377, 607
BstMAI GTCTC 1 cut(s) 297
BstMBI GATC 4 cut(s) 316, 322, 374, 604
BstMCI CGRYCG 1 cut(s) 50
BstMWI GCNNNNNNNGC 1 cut(s) 52
BstPI GGTNACC 1 cut(s) 508
BstV2I GAAGAC 2 cut(s) 114, 444
BtgI CCRYGG 1 cut(s) 273
BtsCI GGATG 3 cut(s) 176, 454, 481
BtsIMutI CAGTG 1 cut(s) 306
CciI TCATGA 1 cut(s) 319
Cfr13I GGNCC 1 cut(s) 16
CseI GACGC 2 cut(s) 61, 108
Csp6I GTAC 2 cut(s) 536, 625
CviAII CATG 3 cut(s) 274, 320, 542
CviJI RGCY 9 cut(s) 77, 105, 173, 232, 272, 282, 505, 586, 601
CviKI_1 RGCY 9 cut(s) 77, 105, 173, 232, 272, 282, 505, 586, 601
CviQI GTAC 2 cut(s) 536, 625
DdeI CTNAG 6 cut(s) 35, 56, 233, 501, 515, 587
DpnI GATC 4 cut(s) 318, 324, 376, 606
DpnII GATC 4 cut(s) 316, 322, 374, 604
DraIII CACNNNGTG 2 cut(s) 293, 359
Eco130I CCWWGG 2 cut(s) 100, 273
Eco47I GGWCC 1 cut(s) 16
Eco91I GGTNACC 1 cut(s) 508
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoO65I GGTNACC 1 cut(s) 508
EcoT14I CCWWGG 2 cut(s) 100, 273
ErhI CCWWGG 2 cut(s) 100, 273
FaeI CATG 3 cut(s) 277, 323, 545
FaiI YATR 5 cut(s) 211, 275, 321, 465, 543
FatI CATG 3 cut(s) 273, 319, 541
FauI CCCGC 1 cut(s) 358
FbaI TGATCA 2 cut(s) 316, 322
FblI GTMKAC 1 cut(s) 50
FokI GGATG 3 cut(s) 163, 461, 488
FspBI CTAG 1 cut(s) 339
HgaI GACGC 2 cut(s) 61, 108
Hin1II CATG 3 cut(s) 277, 323, 545
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HindIII AAGCTT 1 cut(s) 599
HinfI GANTC 1 cut(s) 425
HphI GGTGA 1 cut(s) 123
Hpy166II GTNNAC 2 cut(s) 51, 296
Hpy188I TCNGA 5 cut(s) 16, 160, 268, 430, 571
Hpy188III TCNNGA 1 cut(s) 320
Hpy8I GTNNAC 2 cut(s) 51, 296
Hpy99I CGWCG 1 cut(s) 55
HpyAV CCTTC 4 cut(s) 41, 138, 153, 365
HpyCH4IV ACGT 1 cut(s) 67
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 52
HpyF3I CTNAG 6 cut(s) 35, 56, 233, 501, 515, 587
HpySE526I ACGT 1 cut(s) 67
Hsp92II CATG 3 cut(s) 277, 323, 545
Ksp22I TGATCA 2 cut(s) 316, 322
Kzo9I GATC 4 cut(s) 316, 322, 374, 604
LmnI GCTCC 1 cut(s) 583
LpnPI CCDG 2 cut(s) 275, 491
MaeI CTAG 1 cut(s) 339
MaeII ACGT 1 cut(s) 67
MaeIII GTNAC 2 cut(s) 85, 508
MalI GATC 4 cut(s) 318, 324, 376, 606
MboI GATC 4 cut(s) 316, 322, 374, 604
MboII GAAGA 6 cut(s) 114, 443, 446, 449, 604, 606
MfeI CAATTG 1 cut(s) 399
MluCI AATT 6 cut(s) 218, 239, 343, 388, 399, 492
MseI TTAA 1 cut(s) 485
MunI CAATTG 1 cut(s) 399
MwoI GCNNNNNNNGC 1 cut(s) 52
NcoI CCATGG 1 cut(s) 273
NdeII GATC 4 cut(s) 316, 322, 374, 604
NlaIII CATG 3 cut(s) 277, 323, 545
PagI TCATGA 1 cut(s) 319
PfeI GAWTC 1 cut(s) 425
PspEI GGTNACC 1 cut(s) 508
PspPI GGNCC 1 cut(s) 16
RsaI GTAC 2 cut(s) 537, 626
RsaNI GTAC 2 cut(s) 536, 625
SalI GTCGAC 1 cut(s) 49
SaqAI TTAA 1 cut(s) 485
Sau3AI GATC 4 cut(s) 316, 322, 374, 604
Sau96I GGNCC 1 cut(s) 16
SinI GGWCC 1 cut(s) 16
Sse9I AATT 6 cut(s) 218, 239, 343, 388, 399, 492
SsiI CCGC 2 cut(s) 46, 351
SspI AATATT 2 cut(s) 461, 550
SspMI CTAG 1 cut(s) 339
StyI CCWWGG 2 cut(s) 100, 273
TaiI ACGT 1 cut(s) 70
TaqI TCGA 2 cut(s) 50, 254
TasI AATT 6 cut(s) 218, 239, 343, 388, 399, 492
TfiI GAWTC 1 cut(s) 425
Tru1I TTAA 1 cut(s) 485
Tru9I TTAA 1 cut(s) 485
TscAI CASTG 1 cut(s) 313
TspDTI ATGAA 8 cut(s) 108, 165, 177, 231, 233, 405, 420, 480
TspRI CASTG 1 cut(s) 313
VpaK11BI GGWCC 1 cut(s) 16
XagI CCTNNNNNAGG 1 cut(s) 525
XapI RAATTY 2 cut(s) 239, 492
XmiI GTMKAC 1 cut(s) 50
XspI CTAG 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.