Phd finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24010 |
| fragaria_vesca | FvH4_4g05430 FvH4_4g05430 FvH4_4g05430 FvH4_4g05430 |
| malus_domestica | MD13G1230600.v1.1 MD13G1230700.v1.1 |
| prunus_persica | Prupe.1G056400_v2.0.a1 |
| pyrus_communis | pycom13g20300 |
| rosa_chinensis | RchiOBHm_Chr4g0396581 |
| rosa_laevigata | RLG00000009519 |
| rosa_roxburghii | Rroxscaffold_5G00341430 |
| rosa_rugosa | Rorug03G0348800 Rorug03G0348900 |
| rosa_samantha | Rh4AG070500 Rh4BG068400 Rh4DG065500 |
| rosa_wichuraiana | Rw4G005620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 683 |
| AciI | CCGC | 2 cut(s) | 473, 683 |
| AclWI | GGATC | 2 cut(s) | 524, 537 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AfaI | GTAC | 2 cut(s) | 548, 668 |
| AgsI | TTSAA | 1 cut(s) | 691 |
| AluBI | AGCT | 3 cut(s) | 343, 491, 570 |
| AluI | AGCT | 3 cut(s) | 343, 491, 570 |
| AlwI | GGATC | 2 cut(s) | 524, 537 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 491 |
| ApeKI | GCWGC | 3 cut(s) | 73, 343, 488 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| AspLEI | GCGC | 1 cut(s) | 683 |
| AsuC2I | CCSGG | 1 cut(s) | 411 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 348, 381 |
| BamHI | GGATCC | 1 cut(s) | 529 |
| BbvI | GCAGC | 3 cut(s) | 60, 330, 500 |
| BccI | CCATC | 1 cut(s) | 574 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 383, 417 |
| BciVI | GTATCC | 1 cut(s) | 286 |
| BclI | TGATCA | 1 cut(s) | 313 |
| BcnI | CCSGG | 1 cut(s) | 411 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BfuI | GTATCC | 1 cut(s) | 286 |
| BisI | GCNGC | 5 cut(s) | 74, 344, 474, 489, 684 |
| BlsI | GCNGC | 5 cut(s) | 75, 345, 475, 490, 685 |
| Bme1390I | CCNGG | 1 cut(s) | 411 |
| BmiI | GGNNCC | 2 cut(s) | 531, 620 |
| BmrFI | CCNGG | 1 cut(s) | 411 |
| BpuMI | CCSGG | 1 cut(s) | 411 |
| BsaAI | YACGTR | 1 cut(s) | 546 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 567, 597 |
| Bse1I | ACTGG | 2 cut(s) | 462, 524 |
| Bse3DI | GCAATG | 2 cut(s) | 243, 374 |
| BseGI | GGATG | 1 cut(s) | 214 |
| BseMI | GCAATG | 2 cut(s) | 243, 374 |
| BseNI | ACTGG | 2 cut(s) | 462, 524 |
| BseRI | GAGGAG | 1 cut(s) | 450 |
| BseXI | GCAGC | 3 cut(s) | 60, 330, 500 |
| Bsh1236I | CGCG | 1 cut(s) | 683 |
| BsiSI | CCGG | 1 cut(s) | 411 |
| Bsp143I | GATC | 2 cut(s) | 313, 529 |
| BspACI | CCGC | 2 cut(s) | 473, 683 |
| BspFNI | CGCG | 1 cut(s) | 683 |
| BspLI | GGNNCC | 2 cut(s) | 531, 620 |
| BspPI | GGATC | 2 cut(s) | 524, 537 |
| BspQI | GCTCTTC | 1 cut(s) | 333 |
| BsrDI | GCAATG | 2 cut(s) | 243, 374 |
| BsrI | ACTGG | 2 cut(s) | 462, 524 |
| BssMI | GATC | 2 cut(s) | 313, 529 |
| Bst4CI | ACNGT | 3 cut(s) | 361, 551, 671 |
| Bst6I | CTCTTC | 1 cut(s) | 333 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 380 |
| BstBAI | YACGTR | 1 cut(s) | 546 |
| BstC8I | GCNNGC | 1 cut(s) | 381 |
| BstF5I | GGATG | 1 cut(s) | 214 |
| BstFNI | CGCG | 1 cut(s) | 683 |
| BstHHI | GCGC | 1 cut(s) | 683 |
| BstKTI | GATC | 2 cut(s) | 316, 532 |
| BstMBI | GATC | 2 cut(s) | 313, 529 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 275, 380, 473, 479, 488 |
| BstSCI | CCNGG | 1 cut(s) | 409 |
| BstUI | CGCG | 1 cut(s) | 683 |
| BstV1I | GCAGC | 3 cut(s) | 60, 330, 500 |
| BstX2I | RGATCY | 1 cut(s) | 529 |
| BstYI | RGATCY | 1 cut(s) | 529 |
| BsuI | GTATCC | 1 cut(s) | 286 |
| BtsCI | GGATG | 1 cut(s) | 214 |
| BtsI | GCAGTG | 1 cut(s) | 75 |
| BtsIMutI | CAGTG | 2 cut(s) | 75, 531 |
| Cac8I | GCNNGC | 1 cut(s) | 381 |
| CaiI | CAGNNNCTG | 1 cut(s) | 491 |
| CfoI | GCGC | 1 cut(s) | 683 |
| CseI | GACGC | 1 cut(s) | 708 |
| Csp6I | GTAC | 2 cut(s) | 547, 667 |
| CviJI | RGCY | 5 cut(s) | 215, 269, 343, 491, 570 |
| CviKI_1 | RGCY | 5 cut(s) | 215, 269, 343, 491, 570 |
| CviQI | GTAC | 2 cut(s) | 547, 667 |
| DpnI | GATC | 2 cut(s) | 315, 531 |
| DpnII | GATC | 2 cut(s) | 313, 529 |
| DraI | TTTAAA | 1 cut(s) | 324 |
| Eam1104I | CTCTTC | 1 cut(s) | 333 |
| EarI | CTCTTC | 1 cut(s) | 333 |
| FaiI | YATR | 9 cut(s) | 66, 263, 280, 282, 302, 509, 521, 556, 573 |
| FauNDI | CATATG | 1 cut(s) | 280 |
| FbaI | TGATCA | 1 cut(s) | 313 |
| Fnu4HI | GCNGC | 5 cut(s) | 74, 344, 474, 489, 684 |
| FokI | GGATG | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 5 cut(s) | 74, 344, 474, 489, 684 |
| FspBI | CTAG | 1 cut(s) | 83 |
| GlaI | GCGC | 1 cut(s) | 682 |
| GluI | GCNGC | 5 cut(s) | 74, 344, 474, 489, 684 |
| HapII | CCGG | 1 cut(s) | 411 |
| HgaI | GACGC | 1 cut(s) | 708 |
| HhaI | GCGC | 1 cut(s) | 683 |
| Hin6I | GCGC | 1 cut(s) | 681 |
| HinP1I | GCGC | 1 cut(s) | 681 |
| HinfI | GANTC | 2 cut(s) | 35, 201 |
| HpaII | CCGG | 1 cut(s) | 411 |
| Hpy166II | GTNNAC | 2 cut(s) | 95, 131 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 208, 642 |
| Hpy188III | TCNNGA | 5 cut(s) | 32, 83, 168, 218, 674 |
| Hpy8I | GTNNAC | 2 cut(s) | 95, 131 |
| Hpy99I | CGWCG | 1 cut(s) | 702 |
| HpyAV | CCTTC | 3 cut(s) | 16, 408, 419 |
| HpyCH4III | ACNGT | 3 cut(s) | 361, 551, 671 |
| HpyCH4IV | ACGT | 1 cut(s) | 545 |
| HpyCH4V | TGCA | 6 cut(s) | 68, 248, 368, 374, 404, 606 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 275, 380, 473, 479, 488 |
| HpySE526I | ACGT | 1 cut(s) | 545 |
| HspAI | GCGC | 1 cut(s) | 681 |
| Ksp22I | TGATCA | 1 cut(s) | 313 |
| Kzo9I | GATC | 2 cut(s) | 313, 529 |
| LguI | GCTCTTC | 1 cut(s) | 333 |
| LmnI | GCTCC | 1 cut(s) | 388 |
| LpnPI | CCDG | 9 cut(s) | 17, 153, 195, 384, 393, 424, 443, 537, 687 |
| Lsp1109I | GCAGC | 3 cut(s) | 60, 330, 500 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MaeII | ACGT | 1 cut(s) | 545 |
| MaeIII | GTNAC | 1 cut(s) | 557 |
| MalI | GATC | 2 cut(s) | 315, 531 |
| MboI | GATC | 2 cut(s) | 313, 529 |
| MboII | GAAGA | 2 cut(s) | 26, 350 |
| MfeI | CAATTG | 1 cut(s) | 601 |
| MflI | RGATCY | 1 cut(s) | 529 |
| MluCI | AATT | 3 cut(s) | 17, 159, 601 |
| MnlI | CCTC | 9 cut(s) | 20, 102, 136, 199, 205, 328, 422, 428, 431 |
| MseI | TTAA | 4 cut(s) | 21, 150, 162, 323 |
| MspA1I | CMGCKG | 2 cut(s) | 473, 491 |
| MspI | CCGG | 1 cut(s) | 411 |
| MspR9I | CCNGG | 1 cut(s) | 411 |
| MunI | CAATTG | 1 cut(s) | 601 |
| MvnI | CGCG | 1 cut(s) | 683 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 275, 380, 473, 479, 488 |
| NciI | CCSGG | 1 cut(s) | 411 |
| NdeI | CATATG | 1 cut(s) | 280 |
| NdeII | GATC | 2 cut(s) | 313, 529 |
| NlaIV | GGNNCC | 2 cut(s) | 531, 620 |
| PciSI | GCTCTTC | 1 cut(s) | 333 |
| PfeI | GAWTC | 2 cut(s) | 35, 201 |
| PkrI | GCNGC | 5 cut(s) | 75, 345, 475, 490, 685 |
| Ppu21I | YACGTR | 1 cut(s) | 546 |
| PspN4I | GGNNCC | 2 cut(s) | 531, 620 |
| PstNI | CAGNNNCTG | 1 cut(s) | 491 |
| PsuI | RGATCY | 1 cut(s) | 529 |
| PvuII | CAGCTG | 1 cut(s) | 491 |
| RsaI | GTAC | 2 cut(s) | 548, 668 |
| RsaNI | GTAC | 2 cut(s) | 547, 667 |
| SapI | GCTCTTC | 1 cut(s) | 333 |
| SaqAI | TTAA | 4 cut(s) | 21, 150, 162, 323 |
| SatI | GCNGC | 5 cut(s) | 74, 344, 474, 489, 684 |
| Sau3AI | GATC | 2 cut(s) | 313, 529 |
| ScrFI | CCNGG | 1 cut(s) | 411 |
| Sse9I | AATT | 3 cut(s) | 17, 159, 601 |
| SsiI | CCGC | 2 cut(s) | 473, 683 |
| SspI | AATATT | 3 cut(s) | 49, 175, 320 |
| SspMI | CTAG | 1 cut(s) | 83 |
| StyD4I | CCNGG | 1 cut(s) | 409 |
| TaaI | ACNGT | 3 cut(s) | 361, 551, 671 |
| TaiI | ACGT | 1 cut(s) | 548 |
| TaqI | TCGA | 3 cut(s) | 12, 393, 697 |
| TasI | AATT | 3 cut(s) | 17, 159, 601 |
| TauI | GCSGC | 2 cut(s) | 476, 686 |
| TfiI | GAWTC | 2 cut(s) | 35, 201 |
| Tru1I | TTAA | 4 cut(s) | 21, 150, 162, 323 |
| Tru9I | TTAA | 4 cut(s) | 21, 150, 162, 323 |
| TscAI | CASTG | 2 cut(s) | 75, 531 |
| TseI | GCWGC | 3 cut(s) | 73, 343, 488 |
| TspDTI | ATGAA | 3 cut(s) | 132, 267, 552 |
| TspRI | CASTG | 2 cut(s) | 75, 531 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XbaI | TCTAGA | 1 cut(s) | 82 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 569, 660 |
| XspI | CTAG | 1 cut(s) | 83 |