Rorug03G0348900

Phd finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0013146
Physical Location & Seq
Reverse (-)
42525151 .. 42567712
42562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0348900.1

Sequence Viewer

Length: 1851 bp
ATGAGAACAGCAGAAGCAGCAGGTGGAGGAGGATACATGAAATATAAGGACCCCAAACAGCCCTTGAATACTAGAATCAATGACCTACTGAGCCGGATGACTTTGGAGGAAAAGATTGGCCAGATGACGCAGATAGACCGCAGTGTTGCTTCAGCTGAGGTCATGAACAAGTACTACATTGGGAGTGTCTTGAGCGGCGGTGGGAGTGTGCCATCAAAACAAGCTTCTGCAGAGACTTGGGTTACAATGGTGAATGATTTTCAAAAGGGTTCTCTATCAACTCGCCTCGGTATTCCAATGATTTATGGTATTGATGCTGTTCATGGCCACAATAATGTCTACAAGGCAACAATCTTTCCCCACAATGTTGGCCTCGGAGCTACCAGGGACCCTGAGCTTGTTAAGAAGATTGGAGCTGCAACTGCACTTGAAGTTAGAGCCACAGGCATTCCATATGTCTTTGCACCTTGCATAGCGGTTTGTAGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTATAGTGAAGATCATAAGGTTGTTCAAGCAATGACTCAGATCATACCTGGATTACAAGGAGATATACCACCTAACTCTAGAAAGGGTGTTCCCTTTATAGCAGCTGGAAATAAAAAGGTTGCAGCTTGTGCAAAGCATTATGTGGGCGATGGTGGAACAACCAAAGGCATCAATGAGAATAACACTGTGATAAACAGGCATGGGTTGCTCAGCATTCACATGCCAGCCTACTATAACTCAATTATCGAAGGTGTTGCAACCATTATGGTATCTTACTCCAGCTGGAATGGAGTCAAGATGCATGCTAACCGTGATCTGGTCACTGGCTTTCTTAAGAATACTCTCCGTTTCAGGGGTTTTGTCATCTCAGATTGGGAGGGTATTGACAGAATCACCTCACCACCTCATGCCAACTACTCATACTCGATTACAGCAGGGATCAATGCTGGCATTGACATGATCATGGTTCCATACAACTATACAGAATTCATTGATGGTCTAACTTTCCAGGCAAAAAATAAAATCATTCCCATGAGCAGAATTGATGATGCAGTGAGGAGAATTTTGCGGGTTAAGTTTATAATGGGGCTATTTGAGAATCCGTTGGCTGATCTCAGCCTCGTCAACCAGCTTGGCAGTCAGGAACACAGAGACTTGGCTCGGGAAGCTGTGAGGCGATCGTTAGTTCTTCTAAAGAATGGTGAATCTGCAGACAAGCCATTGCTACCCCTTCCCAAGAAGACATCAAAAATACTTGTAGCTGGAAGTCATGCAGACAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGATTGAGTGGCAACGATCTCACACATGGTACCACAATCCTAACCGGTATAAAGAACACAGTTGATCCAGAAACCGAAGTGGTGTACAAGAAGAATCCTGATGCCGAGTATGTTAAGTCAACTTATTTCTCCTATGCCATCGTTGTCGTAGGAGAACCACCATATGCGGAGACATTTGGTGACAGTTTAACTTTGACTCTCCCTGATGCGGGCCTTAAAACCATTACAAATGTTTGTGGTGCTGTGAAGTGTGTTGTCATCGTCATCTCCGGTCGTCCTGTTGTGATCCAACCATATGTTCCCCTGCTAGATGCTCTGGTTGCGGCGTGGCTTCCAGGAAGTGAGGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGACTATGGTTTCACCGGCAAGCTTTCTCGCACTTGGTTTAAAACCGTTGATCAGCTACCTATGAATGTTGGAGATCCACATTATGACCCTCTCGTCCCCTTTGGATTTGGCCTCACAACAACACCCACCAAAGCCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0035064 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0140030 GO:0140034
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ING

Protein Analysis

616

Amino Acids

67.04

Weight (kDa)

8.57

Isoelectric Point (pI)

30.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 34 - 363 9.7e-68 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 400 - 609 9.3e-37 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013146)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24010
fragaria_vesca FvH4_4g05430 FvH4_4g05430 FvH4_4g05430 FvH4_4g05430
malus_domestica MD13G1230600.v1.1 MD13G1230700.v1.1
prunus_persica Prupe.1G056400_v2.0.a1
pyrus_communis pycom13g20300
rosa_chinensis RchiOBHm_Chr4g0396581
rosa_laevigata RLG00000009519
rosa_roxburghii Rroxscaffold_5G00341430
rosa_rugosa Rorug03G0348800 Rorug03G0348900
rosa_samantha Rh4AG070500 Rh4BG068400 Rh4DG065500
rosa_wichuraiana Rw4G005620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1097
AarI CACCTGC 1 cut(s) 11
AasI GACNNNNNNGTC 1 cut(s) 1802
Acc36I ACCTGC 1 cut(s) 11
Acc65I GGTACC 1 cut(s) 1364
AccB1I GGYRCC 1 cut(s) 1364
AccB7I CCANNNNNTGG 1 cut(s) 1329
AccBSI CCGCTC 1 cut(s) 195
AccI GTMKAC 1 cut(s) 339
AciI CCGC 8 cut(s) 139, 195, 198, 476, 1084, 1502, 1544, 1658
AclWI GGATC 5 cut(s) 482, 962, 1394, 1615, 1778
AcoI YGGCCR 2 cut(s) 118, 325
AcsI RAATTY 2 cut(s) 1001, 1077
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 3 cut(s) 173, 1366, 1421
AfiI CCNNNNNNNGG 6 cut(s) 497, 832, 868, 1329, 1543, 1544
AflII CTTAAG 1 cut(s) 848
AgeI ACCGGT 1 cut(s) 1379
AgsI TTSAA 4 cut(s) 67, 263, 431, 542
AjnI CCWGG 4 cut(s) 383, 562, 1023, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 1617, 1649
Alw26I GTCTC 3 cut(s) 227, 1161, 1499
AlwI GGATC 5 cut(s) 482, 962, 1394, 1615, 1778
Ama87I CYCGRG 1 cut(s) 1176
AoxI GGCC 6 cut(s) 118, 325, 370, 1546, 1681, 1819
ApeKI GCWGC 4 cut(s) 17, 416, 617, 638
ApoI RAATTY 2 cut(s) 1001, 1077
AsiGI ACCGGT 1 cut(s) 1379
Asp718I GGTACC 1 cut(s) 1364
AspS9I GGNCC 5 cut(s) 49, 388, 1320, 1546, 1681
AsuHPI GGTGA 7 cut(s) 262, 901, 906, 1229, 1526, 1714, 1721
AvaI CYCGRG 1 cut(s) 1176
AvaII GGWCC 3 cut(s) 49, 388, 1320
BalI TGGCCA 2 cut(s) 120, 327
BanI GGYRCC 1 cut(s) 1364
BbsI GAAGAC 1 cut(s) 1262
BbvCI CCTCAGC 1 cut(s) 156
BbvI GCAGC 4 cut(s) 29, 403, 629, 650
BccI CCATC 5 cut(s) 220, 489, 659, 1004, 1481
BcgI CGANNNNNNTGC 2 cut(s) 752, 786
BciT130I CCWGG 4 cut(s) 385, 564, 1025, 1671
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 2 cut(s) 975, 1759
BcoDI GTCTC 3 cut(s) 227, 1161, 1499
BfaI CTAG 4 cut(s) 72, 594, 1643, 1849
BfmI CTRYAG 3 cut(s) 228, 517, 1224
BfrI CTTAAG 1 cut(s) 848
BfuAI ACCTGC 1 cut(s) 11
BfuI GTATCC 1 cut(s) 26
BisI GCNGC 6 cut(s) 18, 196, 417, 618, 639, 1659
BlpI GCTNAGC 1 cut(s) 725
BlsI GCNGC 6 cut(s) 19, 197, 418, 619, 640, 1660
BmcAI AGTACT 1 cut(s) 173
Bme1390I CCNGG 4 cut(s) 385, 564, 1025, 1671
Bme18I GGWCC 3 cut(s) 49, 388, 1320
BmeT110I CYCGRG 1 cut(s) 1176
BmgT120I GGNCC 5 cut(s) 49, 388, 1320, 1546, 1681
BmiI GGNNCC 5 cut(s) 51, 389, 390, 984, 1366
BmrFI CCNGG 4 cut(s) 385, 564, 1025, 1671
BmsI GCATC 7 cut(s) 304, 693, 804, 1054, 1426, 1531, 1636
BpiI GAAGAC 1 cut(s) 1262
BpmI CTGGAG 1 cut(s) 778
Bpu10I CCTNAGC 2 cut(s) 156, 393
Bpu1102I GCTNAGC 1 cut(s) 725
BpuEI CTTGAG 1 cut(s) 211
BsaJI CCNNGG 4 cut(s) 286, 373, 384, 1684
BsaWI WCCGGW 2 cut(s) 1379, 1604
Bsc4I CCNNNNNNNGG 6 cut(s) 497, 832, 868, 1329, 1543, 1544
Bse118I RCCGGY 2 cut(s) 1379, 1724
Bse1I ACTGG 1 cut(s) 844
Bse3DI GCAATG 2 cut(s) 552, 1235
BseBI CCWGG 4 cut(s) 385, 564, 1025, 1671
BseDI CCNNGG 4 cut(s) 286, 373, 384, 1684
BseGI GGATG 1 cut(s) 102
BseLI CCNNNNNNNGG 6 cut(s) 497, 832, 868, 1329, 1543, 1544
BseMI GCAATG 2 cut(s) 552, 1235
BseMII CTCAG 7 cut(s) 80, 147, 384, 566, 739, 897, 1144
BseNI ACTGG 1 cut(s) 844
BseRI GAGGAG 2 cut(s) 42, 1087
BseXI GCAGC 4 cut(s) 29, 403, 629, 650
BsgI GTGCAG 1 cut(s) 408
Bsh1285I CGRYCG 2 cut(s) 1196, 1609
BshFI GGCC 6 cut(s) 120, 327, 372, 1548, 1683, 1821
BshNI GGYRCC 1 cut(s) 1364
BshTI ACCGGT 1 cut(s) 1379
BsiEI CGRYCG 2 cut(s) 1196, 1609
BsiHKCI CYCGRG 1 cut(s) 1176
BsiSI CCGG 4 cut(s) 94, 1380, 1605, 1725
BslFI GGGAC 2 cut(s) 401, 1790
BslI CCNNNNNNNGG 6 cut(s) 497, 832, 868, 1329, 1543, 1544
BsmAI GTCTC 3 cut(s) 227, 1161, 1499
BsmFI GGGAC 2 cut(s) 401, 1790
BsmI GAATGC 2 cut(s) 447, 729
BsnI GGCC 6 cut(s) 120, 327, 372, 1548, 1683, 1821
BsoBI CYCGRG 1 cut(s) 1176
Bsp1407I TGTACA 1 cut(s) 1419
Bsp1720I GCTNAGC 1 cut(s) 725
BspACI CCGC 8 cut(s) 139, 195, 198, 476, 1084, 1502, 1544, 1658
BspANI GGCC 6 cut(s) 120, 327, 372, 1548, 1683, 1821
BspCNI CTCAG 7 cut(s) 81, 148, 385, 565, 738, 896, 1143
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 5 cut(s) 51, 389, 390, 984, 1366
BspMAI CTGCAG 2 cut(s) 232, 1228
BspMI ACCTGC 1 cut(s) 11
BspPI GGATC 5 cut(s) 482, 962, 1394, 1615, 1778
BspT107I GGYRCC 1 cut(s) 1364
BspTI CTTAAG 1 cut(s) 848
BsrBI CCGCTC 1 cut(s) 195
BsrDI GCAATG 2 cut(s) 552, 1235
BsrFI RCCGGY 2 cut(s) 1379, 1724
BsrGI TGTACA 1 cut(s) 1419
BsrI ACTGG 1 cut(s) 844
BssAI RCCGGY 2 cut(s) 1379, 1724
BssECI CCNNGG 4 cut(s) 286, 373, 384, 1684
BssT1I CCWWGG 1 cut(s) 1684
Bst2UI CCWGG 4 cut(s) 385, 564, 1025, 1671
Bst4CI ACNGT 5 cut(s) 703, 827, 1396, 1520, 1756
BstAFI CTTAAG 1 cut(s) 848
BstAPI GCANNNNNTGC 2 cut(s) 644, 721
BstAUI TGTACA 1 cut(s) 1419
BstC8I GCNNGC 5 cut(s) 741, 819, 964, 1546, 1730
BstDEI CTNAG 7 cut(s) 89, 156, 393, 552, 725, 883, 1130
BstF5I GGATG 1 cut(s) 102
BstMAI GTCTC 3 cut(s) 227, 1161, 1499
BstMCI CGRYCG 2 cut(s) 1196, 1609
BstMWI GCNNNNNNNGC 6 cut(s) 17, 422, 644, 721, 1181, 1655
BstNI CCWGG 4 cut(s) 385, 564, 1025, 1671
BstNSI RCATGY 2 cut(s) 739, 821
BstSCI CCNGG 4 cut(s) 383, 562, 1023, 1669
BstSFI CTRYAG 3 cut(s) 228, 517, 1224
BstV1I GCAGC 4 cut(s) 29, 403, 629, 650
BstV2I GAAGAC 1 cut(s) 1262
BstX2I RGATCY 2 cut(s) 487, 1783
BstXI CCANNNNNNTGG 1 cut(s) 368
BstYI RGATCY 2 cut(s) 487, 1783
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 6 cut(s) 120, 327, 372, 1548, 1683, 1821
BtgZI GCGATG 1 cut(s) 678
BtsCI GGATG 1 cut(s) 102
BtsI GCAGTG 2 cut(s) 148, 1074
BtsIMutI CAGTG 5 cut(s) 148, 699, 837, 1074, 1313
BveI ACCTGC 1 cut(s) 11
Cac8I GCNNGC 5 cut(s) 741, 819, 964, 1546, 1730
CciI TCATGA 1 cut(s) 162
Cfr10I RCCGGY 2 cut(s) 1379, 1724
Cfr13I GGNCC 5 cut(s) 49, 388, 1320, 1546, 1681
CseI GACGC 1 cut(s) 136
Csp6I GTAC 3 cut(s) 172, 1365, 1420
CspAI ACCGGT 1 cut(s) 1379
CviQI GTAC 3 cut(s) 172, 1365, 1420
DdeI CTNAG 7 cut(s) 89, 156, 393, 552, 725, 883, 1130
DraI TTTAAA 1 cut(s) 1750
DrdI GACNNNNNNGTC 1 cut(s) 1802
DseDI GACNNNNNNGTC 1 cut(s) 1802
EaeI YGGCCR 2 cut(s) 118, 325
Eco130I CCWWGG 1 cut(s) 1684
Eco47I GGWCC 3 cut(s) 49, 388, 1320
Eco57I CTGAAG 1 cut(s) 135
Eco88I CYCGRG 1 cut(s) 1176
EcoO109I RGGNCCY 2 cut(s) 49, 388
EcoRI GAATTC 1 cut(s) 1001
EcoRII CCWGG 4 cut(s) 383, 562, 1023, 1669
EcoT14I CCWWGG 1 cut(s) 1684
EcoT22I ATGCAT 1 cut(s) 819
ErhI CCWWGG 1 cut(s) 1684
FaqI GGGAC 2 cut(s) 401, 1790
FauI CCCGC 2 cut(s) 1077, 1537
FauNDI CATATG 3 cut(s) 454, 1498, 1630
FbaI TGATCA 2 cut(s) 975, 1759
FblI GTMKAC 1 cut(s) 339
Fnu4HI GCNGC 6 cut(s) 18, 196, 417, 618, 639, 1659
FokI GGATG 1 cut(s) 109
Fsp4HI GCNGC 6 cut(s) 18, 196, 417, 618, 639, 1659
FspBI CTAG 4 cut(s) 72, 594, 1643, 1849
GluI GCNGC 6 cut(s) 18, 196, 417, 618, 639, 1659
GsuI CTGGAG 1 cut(s) 778
HaeIII GGCC 6 cut(s) 120, 327, 372, 1548, 1683, 1821
HapII CCGG 4 cut(s) 94, 1380, 1605, 1725
HgaI GACGC 1 cut(s) 136
HincII GTYRAC 2 cut(s) 1141, 1455
HindII GTYRAC 2 cut(s) 1141, 1455
HindIII AAGCTT 2 cut(s) 222, 1730
HinfI GANTC 8 cut(s) 75, 550, 807, 906, 1114, 1220, 1429, 1531
HpaII CCGG 4 cut(s) 94, 1380, 1605, 1725
HphI GGTGA 7 cut(s) 262, 901, 906, 1229, 1526, 1714, 1721
Hpy166II GTNNAC 4 cut(s) 340, 1141, 1420, 1455
Hpy188I TCNGA 3 cut(s) 377, 555, 886
Hpy188III TCNNGA 8 cut(s) 163, 190, 594, 811, 1157, 1178, 1403, 1433
Hpy8I GTNNAC 4 cut(s) 340, 1141, 1420, 1455
HpyAV CCTTC 2 cut(s) 758, 1256
HpyCH4III ACNGT 5 cut(s) 703, 827, 1396, 1520, 1756
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 422, 644, 721, 1181, 1655
HpyF3I CTNAG 7 cut(s) 89, 156, 393, 552, 725, 883, 1130
KflI GGGWCCC 1 cut(s) 388
KpnI GGTACC 1 cut(s) 1368
Ksp22I TGATCA 2 cut(s) 975, 1759
LmnI GCTCC 2 cut(s) 377, 413
Lsp1109I GCAGC 4 cut(s) 29, 403, 629, 650
LweI GCATC 7 cut(s) 304, 693, 804, 1054, 1426, 1531, 1636
MaeI CTAG 4 cut(s) 72, 594, 1643, 1849
MaeIII GTNAC 5 cut(s) 241, 506, 835, 1514, 1709
MbiI CCGCTC 1 cut(s) 195
MboII GAAGA 5 cut(s) 418, 536, 1196, 1267, 1438
MflI RGATCY 2 cut(s) 487, 1783
MlsI TGGCCA 2 cut(s) 120, 327
MluCI AATT 4 cut(s) 756, 1001, 1056, 1077
MluNI TGGCCA 2 cut(s) 120, 327
MlyI GAGTC 3 cut(s) 544, 816, 1525
MmeI TCCRAC 3 cut(s) 1298, 1648, 1759
Mox20I TGGCCA 2 cut(s) 120, 327
Mph1103I ATGCAT 1 cut(s) 819
MscI TGGCCA 2 cut(s) 120, 327
MseI TTAA 7 cut(s) 402, 849, 1089, 1449, 1523, 1551, 1749
MslI CAYNNNNRTG 5 cut(s) 333, 734, 971, 977, 1046
Msp20I TGGCCA 2 cut(s) 120, 327
MspA1I CMGCKG 3 cut(s) 155, 620, 798
MspCI CTTAAG 1 cut(s) 848
MspI CCGG 4 cut(s) 94, 1380, 1605, 1725
MspR9I CCNGG 4 cut(s) 385, 564, 1025, 1671
Mva1269I GAATGC 2 cut(s) 447, 729
MvaI CCWGG 4 cut(s) 385, 564, 1025, 1671
MwoI GCNNNNNNNGC 6 cut(s) 17, 422, 644, 721, 1181, 1655
NdeI CATATG 3 cut(s) 454, 1498, 1630
NlaIV GGNNCC 5 cut(s) 51, 389, 390, 984, 1366
NmeAIII GCCGAG 1 cut(s) 1465
NmuCI GTSAC 3 cut(s) 835, 1514, 1709
NsiI ATGCAT 1 cut(s) 819
NspI RCATGY 2 cut(s) 739, 821
PaeI GCATGC 1 cut(s) 821
PagI TCATGA 1 cut(s) 162
PaqCI CACCTGC 1 cut(s) 11
PctI GAATGC 2 cut(s) 447, 729
PfeI GAWTC 5 cut(s) 75, 906, 1114, 1220, 1429
PflMI CCANNNNNTGG 1 cut(s) 1329
PfoI TCCNGGA 1 cut(s) 1669
PinAI ACCGGT 1 cut(s) 1379
PkrI GCNGC 6 cut(s) 19, 197, 418, 619, 640, 1660
Ple19I CGATCG 1 cut(s) 1196
PleI GAGTC 3 cut(s) 544, 815, 1525
PpsI GAGTC 3 cut(s) 544, 815, 1525
PpuMI RGGWCCY 2 cut(s) 49, 388
PsiI TTATAA 1 cut(s) 1097
Psp5II RGGWCCY 2 cut(s) 49, 388
Psp6I CCWGG 4 cut(s) 383, 562, 1023, 1669
PspGI CCWGG 4 cut(s) 383, 562, 1023, 1669
PspN4I GGNNCC 5 cut(s) 51, 389, 390, 984, 1366
PspPI GGNCC 5 cut(s) 49, 388, 1320, 1546, 1681
PspPPI RGGWCCY 2 cut(s) 49, 388
PsrI GAACNNNNNNTAC 2 cut(s) 158, 190
PstI CTGCAG 2 cut(s) 232, 1228
PsuI RGATCY 2 cut(s) 487, 1783
PvuI CGATCG 1 cut(s) 1196
PvuII CAGCTG 3 cut(s) 155, 620, 798
RsaI GTAC 3 cut(s) 173, 1366, 1421
RsaNI GTAC 3 cut(s) 172, 1365, 1420
RseI CAYNNNNRTG 5 cut(s) 333, 734, 971, 977, 1046
SaqAI TTAA 7 cut(s) 402, 849, 1089, 1449, 1523, 1551, 1749
SatI GCNGC 6 cut(s) 18, 196, 417, 618, 639, 1659
Sau96I GGNCC 5 cut(s) 49, 388, 1320, 1546, 1681
ScaI AGTACT 1 cut(s) 173
SchI GAGTC 3 cut(s) 544, 816, 1525
ScrFI CCNGG 4 cut(s) 385, 564, 1025, 1671
SfaNI GCATC 7 cut(s) 304, 693, 804, 1054, 1426, 1531, 1636
SfcI CTRYAG 3 cut(s) 228, 517, 1224
SinI GGWCC 3 cut(s) 49, 388, 1320
SmiMI CAYNNNNRTG 5 cut(s) 333, 734, 971, 977, 1046
SmlI CTYRAG 2 cut(s) 190, 848
SmoI CTYRAG 2 cut(s) 190, 848
SphI GCATGC 1 cut(s) 821
Sse9I AATT 4 cut(s) 756, 1001, 1056, 1077
SsiI CCGC 8 cut(s) 139, 195, 198, 476, 1084, 1502, 1544, 1658
SspMI CTAG 4 cut(s) 72, 594, 1643, 1849
StyD4I CCNGG 4 cut(s) 383, 562, 1023, 1669
StyI CCWWGG 1 cut(s) 1684
TaaI ACNGT 5 cut(s) 703, 827, 1396, 1520, 1756
TaqI TCGA 2 cut(s) 762, 941
TasI AATT 4 cut(s) 756, 1001, 1056, 1077
TatI WGTACW 2 cut(s) 171, 1419
TauI GCSGC 2 cut(s) 198, 1661
TfiI GAWTC 5 cut(s) 75, 906, 1114, 1220, 1429
Tru1I TTAA 7 cut(s) 402, 849, 1089, 1449, 1523, 1551, 1749
Tru9I TTAA 7 cut(s) 402, 849, 1089, 1449, 1523, 1551, 1749
TscAI CASTG 5 cut(s) 148, 706, 844, 1074, 1313
TseFI GTSAC 3 cut(s) 835, 1514, 1709
TseI GCWGC 4 cut(s) 17, 416, 617, 638
Tsp45I GTSAC 3 cut(s) 835, 1514, 1709
TspDTI ATGAA 5 cut(s) 53, 179, 311, 994, 1787
TspGWI ACGGA 2 cut(s) 851, 1107
TspRI CASTG 5 cut(s) 148, 706, 844, 1074, 1313
Van91I CCANNNNNTGG 1 cut(s) 1329
Vha464I CTTAAG 1 cut(s) 848
VpaK11BI GGWCC 3 cut(s) 49, 388, 1320
XapI RAATTY 2 cut(s) 1001, 1077
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 2 cut(s) 739, 821
XmiI GTMKAC 1 cut(s) 339
XspI CTAG 4 cut(s) 72, 594, 1643, 1849
ZrmI AGTACT 1 cut(s) 173
Zsp2I ATGCAT 1 cut(s) 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.