Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0017283

Physical Location & Seq

Genomic Coordinates Reverse (-)

4895489 .. 4898720

Gene Structure 3232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G068800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGAGATGAACTCCACTTCTAAGCCGACGTCTCCAGCGCTGTTCTTTTTCCTCGGAGGGATAGTCATGCTCATAATTTTGCTTGTTCTGATATTCGTGTTTCGGAAACTGATCAAACCAGAAGAGCTTAAGAAATTGGTAGCACGAGCCAGAAGGCAGCCAGAATCCAAAGATTTGTTCAGTGGGAACCTTCGAACAATAAGCTATTTCGACTTCCGGACATTGAAGATGGCAACCAAGAACTTTCATCCTGGTAATCTCCTTGGAGTAGGTGGATTTGGCCCTGTCTATCGGGGAAAACTAGGAGATGGGAGGCTAATTGCTGCTAAGAAATTGTGCCTTGACAAATCTCAACAAGGAGAATCAGAATTTCTTACAGAGGTAAAGTTGATCACTAGCGTTCAGCACAGGAACTTGGTTCGGCTTATCGGATGTTGCTCAGATGGGCCTCAACGGCTGCTTGTGTATGAATACATGAAAAACAGGAGCTTGGACCTCATAGTATATGGAAAAAGTGATCGGTTCCTGAACTGGAGCACCAGGTTCCAGATAATTGTGGGTATTGCTCGAGGTTTACAGTATCTGCATGAGGATTCTCCGCTAAGAATTATCCACAGAGATATCAAGGCAAGCAACATTCTTCTTGATGAGAAATACCAACCAAAGATTGGAGATTTTGGGCTGGCTAGGTTCTTCCCTGAAGACCAAGCTTATCTCAGTACAACATTTGCTGGAACTTTGGGTTATACAGCACCGGAATATGCTATTAGAGGAGAATTGTCCGAAAAGGCGGACATATATAGTTTTGGAGTTCTTGTGCTTGAAATAATTAGCGGAAGAAAAAACACAGATCTCACTTTACCATCAGAAATGCAATACCTCCCTGAATATGCATGGAAGTTATTCGAGACGTCAAATGTGATCGAGCTAGTAGATCCAAAATTGCATGAAAATGGATTTGTGGAAAGGGATGTTTTGCAAGCAATCCAAGTTGCCTTCTTATGTCTTCAGCCTCATGCAAATCTGAGACCCCCAATGTCAGAGGTTGTAGCAATGCTAACTTGCAAAGTTGAAATGATTGGAACACCTATGAAACCTGCCTTCTTAGCACGAAGACGCACGAAAGATCAGAACCTTTCTTGGGATACAATATCTGAGGTCTTCCCTTCTCCCTTTCAGAGTGAATCTACCTCATTACCTAAACCACCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

405

Amino Acids

45.8

Weight (kDa)

9.09

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017283)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06650
malus_domestica	MD13G1236800.v1.1 MD16G1241900.v1.1
prunus_persica	Prupe.1G068800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0398541
rosa_laevigata	RLG00000009346
rosa_roxburghii	Rroxscaffold_5G00343510
rosa_rugosa	Rorug04G0009200
rosa_samantha	Rh4AG087000 Rh4BG083700 Rh4CG095200 Rh4DG078600
rosa_wichuraiana	Rw4G007260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	32, 914
Acc36I	ACCTGC	1 cut(s)	1105
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccIII	TCCGGA	1 cut(s)	216
AciI	CCGC	3 cut(s)	599, 791, 834
AclWI	GGATC	1 cut(s)	929
AcsI	RAATTY	1 cut(s)	368
AcuI	CTGAAG	2 cut(s)	720, 992
AcyI	GRCGYC	2 cut(s)	29, 911
AfaI	GTAC	1 cut(s)	721
AfeI	AGCGCT	1 cut(s)	39
AfiI	CCNNNNNNNGG	2 cut(s)	668, 1141
AflII	CTTAAG	1 cut(s)	128
AgsI	TTSAA	3 cut(s)	226, 824, 1073
AjnI	CCWGG	2 cut(s)	250, 539
AjuI	GAANNNNNNNTTGG	2 cut(s)	161, 193
AluBI	AGCT	5 cut(s)	127, 204, 489, 710, 928
AluI	AGCT	5 cut(s)	127, 204, 489, 710, 928
Alw21I	GWGCWC	1 cut(s)	539
Alw26I	GTCTC	3 cut(s)	36, 902, 1021
AlwI	GGATC	1 cut(s)	929
AlwNI	CAGNNNCTG	1 cut(s)	583
Ama87I	CYCGRG	1 cut(s)	567
Aor13HI	TCCGGA	1 cut(s)	216
Aor51HI	AGCGCT	1 cut(s)	39
AoxI	GGCC	2 cut(s)	280, 446
ApeKI	GCWGC	3 cut(s)	157, 323, 457
ApoI	RAATTY	1 cut(s)	368
Asp700I	GAANNNNTTC	1 cut(s)	902
AspLEI	GCGC	1 cut(s)	40
AspS9I	GGNCC	3 cut(s)	281, 446, 493
AsuII	TTCGAA	1 cut(s)	193
AvaI	CYCGRG	1 cut(s)	567
AvaII	GGWCC	1 cut(s)	493
BauI	CACGAG	1 cut(s)	144
BbsI	GAAGAC	4 cut(s)	708, 998, 1120, 1153
Bbv12I	GWGCWC	1 cut(s)	539
BbvI	GCAGC	3 cut(s)	169, 310, 444
BccI	CCATC	4 cut(s)	223, 302, 437, 871
BceAI	ACGGC	1 cut(s)	470
BciT130I	CCWGG	2 cut(s)	252, 541
BciVI	GTATCC	1 cut(s)	1138
BclI	TGATCA	2 cut(s)	111, 390
BcoDI	GTCTC	3 cut(s)	36, 902, 1021
BfaI	CTAG	4 cut(s)	302, 396, 687, 929
BfoI	RGCGCY	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	128
BfuAI	ACCTGC	1 cut(s)	1105
BfuI	GTATCC	1 cut(s)	1138
BglI	GCCNNNNNGGC	1 cut(s)	454
BglII	AGATCT	1 cut(s)	850
BisI	GCNGC	3 cut(s)	158, 324, 458
BlsI	GCNGC	3 cut(s)	159, 325, 459
Bme1390I	CCNGG	2 cut(s)	252, 541
Bme18I	GGWCC	1 cut(s)	493
BmeT110I	CYCGRG	1 cut(s)	567
BmgT120I	GGNCC	3 cut(s)	281, 446, 493
BmiI	GGNNCC	3 cut(s)	188, 524, 545
BmrFI	CCNGG	2 cut(s)	252, 541
BpiI	GAAGAC	4 cut(s)	708, 998, 1120, 1153
BplI	GAGNNNNNCTC	1 cut(s)	28
BpmI	CTGGAG	2 cut(s)	18, 553
Bpu14I	TTCGAA	1 cut(s)	193
BsaHI	GRCGYC	2 cut(s)	29, 911
BsaI	GGTCTC	1 cut(s)	1021
BsaJI	CCNNGG	2 cut(s)	52, 262
BsaWI	WCCGGW	2 cut(s)	216, 754
BsaXI	ACNNNNNCTCC	4 cut(s)	48, 78, 801, 831
Bsc4I	CCNNNNNNNGG	2 cut(s)	668, 1141
Bse1I	ACTGG	1 cut(s)	536
Bse3DI	GCAATG	1 cut(s)	1059
BseAI	TCCGGA	1 cut(s)	216
BseBI	CCWGG	2 cut(s)	252, 541
BseDI	CCNNGG	2 cut(s)	52, 262
BseGI	GGATG	3 cut(s)	247, 437, 976
BseLI	CCNNNNNNNGG	2 cut(s)	668, 1141
BseMI	GCAATG	1 cut(s)	1059
BseMII	CTCAG	4 cut(s)	453, 730, 1016, 1146
BseNI	ACTGG	1 cut(s)	536
BseRI	GAGGAG	1 cut(s)	786
BseXI	GCAGC	3 cut(s)	169, 310, 444
BshFI	GGCC	2 cut(s)	282, 448
BsiHKAI	GWGCWC	1 cut(s)	539
BsiHKCI	CYCGRG	1 cut(s)	567
BsiSI	CCGG	2 cut(s)	217, 755
BslI	CCNNNNNNNGG	2 cut(s)	668, 1141
BsmAI	GTCTC	3 cut(s)	36, 902, 1021
BsmBI	CGTCTC	2 cut(s)	36, 902
BsnI	GGCC	2 cut(s)	282, 448
Bso31I	GGTCTC	1 cut(s)	1021
BsoBI	CYCGRG	1 cut(s)	567
Bsp119I	TTCGAA	1 cut(s)	193
Bsp1286I	GDGCHC	1 cut(s)	539
Bsp13I	TCCGGA	1 cut(s)	216
Bsp143I	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
BspACI	CCGC	3 cut(s)	599, 791, 834
BspANI	GGCC	2 cut(s)	282, 448
BspCNI	CTCAG	4 cut(s)	452, 729, 1017, 1147
BspEI	TCCGGA	1 cut(s)	216
BspLI	GGNNCC	3 cut(s)	188, 524, 545
BspMI	ACCTGC	1 cut(s)	1105
BspPI	GGATC	1 cut(s)	929
BspQI	GCTCTTC	1 cut(s)	117
BspT104I	TTCGAA	1 cut(s)	193
BspTI	CTTAAG	1 cut(s)	128
BspTNI	GGTCTC	1 cut(s)	1021
BsrDI	GCAATG	1 cut(s)	1059
BsrI	ACTGG	1 cut(s)	536
BssECI	CCNNGG	2 cut(s)	52, 262
BssMI	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
BssNI	GRCGYC	2 cut(s)	29, 911
BssSI	CACGAG	1 cut(s)	144
BssT1I	CCWWGG	1 cut(s)	262
Bst2BI	CACGAG	1 cut(s)	144
Bst2UI	CCWGG	2 cut(s)	252, 541
Bst4CI	ACNGT	1 cut(s)	579
Bst6I	CTCTTC	1 cut(s)	117
BstACI	GRCGYC	2 cut(s)	29, 911
BstAFI	CTTAAG	1 cut(s)	128
BstBI	TTCGAA	1 cut(s)	193
BstC8I	GCNNGC	3 cut(s)	631, 684, 981
BstDEI	CTNAG	8 cut(s)	21, 327, 439, 602, 716, 1025, 1105, 1155
BstF5I	GGATG	3 cut(s)	247, 437, 976
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	40
BstKTI	GATC	7 cut(s)	114, 393, 520, 853, 924, 937, 1129
BstMAI	GTCTC	3 cut(s)	36, 902, 1021
BstMBI	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
BstMWI	GCNNNNNNNGC	2 cut(s)	454, 1106
BstNI	CCWGG	2 cut(s)	252, 541
BstSCI	CCNGG	2 cut(s)	250, 539
BstV1I	GCAGC	3 cut(s)	169, 310, 444
BstV2I	GAAGAC	4 cut(s)	708, 998, 1120, 1153
BstX2I	RGATCY	2 cut(s)	850, 934
BstYI	RGATCY	2 cut(s)	850, 934
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	2 cut(s)	282, 448
BtsCI	GGATG	3 cut(s)	247, 437, 976
BtsIMutI	CAGTG	1 cut(s)	187
BveI	ACCTGC	1 cut(s)	1105
Cac8I	GCNNGC	3 cut(s)	631, 684, 981
CaiI	CAGNNNCTG	1 cut(s)	583
CfoI	GCGC	1 cut(s)	40
Cfr13I	GGNCC	3 cut(s)	281, 446, 493
CseI	GACGC	1 cut(s)	1125
CsiI	ACCWGGT	1 cut(s)	539
Csp6I	GTAC	1 cut(s)	720
CviAII	CATG	6 cut(s)	67, 475, 587, 894, 947, 1016
CviQI	GTAC	1 cut(s)	720
DdeI	CTNAG	8 cut(s)	21, 327, 439, 602, 716, 1025, 1105, 1155
DpnI	GATC	7 cut(s)	113, 392, 519, 852, 923, 936, 1128
DpnII	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
Eam1104I	CTCTTC	1 cut(s)	117
EarI	CTCTTC	1 cut(s)	117
EciI	GGCGGA	1 cut(s)	806
Eco130I	CCWWGG	1 cut(s)	262
Eco31I	GGTCTC	1 cut(s)	1021
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	1 cut(s)	493
Eco47III	AGCGCT	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	720, 992
Eco88I	CYCGRG	1 cut(s)	567
EcoRII	CCWGG	2 cut(s)	250, 539
EcoRV	GATATC	1 cut(s)	622
EcoT14I	CCWWGG	1 cut(s)	262
EcoT22I	ATGCAT	1 cut(s)	895
ErhI	CCWWGG	1 cut(s)	262
Esp3I	CGTCTC	2 cut(s)	36, 902
FaeI	CATG	6 cut(s)	70, 478, 590, 897, 950, 1019
FatI	CATG	6 cut(s)	66, 474, 586, 893, 946, 1015
FbaI	TGATCA	2 cut(s)	111, 390
Fnu4HI	GCNGC	3 cut(s)	158, 324, 458
FokI	GGATG	3 cut(s)	234, 444, 983
Fsp4HI	GCNGC	3 cut(s)	158, 324, 458
FspBI	CTAG	4 cut(s)	302, 396, 687, 929
GlaI	GCGC	1 cut(s)	39
GluI	GCNGC	3 cut(s)	158, 324, 458
GsuI	CTGGAG	2 cut(s)	18, 553
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	2 cut(s)	282, 448
HapII	CCGG	2 cut(s)	217, 755
HgaI	GACGC	1 cut(s)	1125
HhaI	GCGC	1 cut(s)	40
Hin1I	GRCGYC	2 cut(s)	29, 911
Hin1II	CATG	6 cut(s)	70, 478, 590, 897, 950, 1019
Hin6I	GCGC	1 cut(s)	38
HinP1I	GCGC	1 cut(s)	38
HindIII	AAGCTT	1 cut(s)	708
HinfI	GANTC	4 cut(s)	164, 362, 593, 1184
HpaII	CCGG	2 cut(s)	217, 755
Hpy166II	GTNNAC	1 cut(s)	575
Hpy188III	TCNNGA	5 cut(s)	217, 526, 547, 644, 907
Hpy8I	GTNNAC	1 cut(s)	575
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	5 cut(s)	147, 200, 1006, 1111, 1176
HpyCH4III	ACNGT	1 cut(s)	579
HpyCH4IV	ACGT	2 cut(s)	29, 911
HpyCH4V	TGCA	7 cut(s)	586, 874, 893, 946, 979, 1019, 1065
HpyF10VI	GCNNNNNNNGC	2 cut(s)	454, 1106
HpyF3I	CTNAG	8 cut(s)	21, 327, 439, 602, 716, 1025, 1105, 1155
HpySE526I	ACGT	2 cut(s)	29, 911
Hsp92I	GRCGYC	2 cut(s)	29, 911
Hsp92II	CATG	6 cut(s)	70, 478, 590, 897, 950, 1019
HspAI	GCGC	1 cut(s)	38
Kpn2I	TCCGGA	1 cut(s)	216
Ksp22I	TGATCA	2 cut(s)	111, 390
Kzo9I	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
LguI	GCTCTTC	1 cut(s)	117
LmnI	GCTCC	2 cut(s)	486, 534
Lsp1109I	GCAGC	3 cut(s)	169, 310, 444
MabI	ACCWGGT	1 cut(s)	539
MaeI	CTAG	4 cut(s)	302, 396, 687, 929
MaeII	ACGT	2 cut(s)	29, 911
MalI	GATC	7 cut(s)	113, 392, 519, 852, 923, 936, 1128
MboI	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
MboII	GAAGA	9 cut(s)	134, 238, 632, 685, 713, 849, 998, 1125, 1153
MflI	RGATCY	2 cut(s)	850, 934
MhlI	GDGCHC	1 cut(s)	539
Mph1103I	ATGCAT	1 cut(s)	895
MroI	TCCGGA	1 cut(s)	216
MroXI	GAANNNNTTC	1 cut(s)	902
MseI	TTAA	1 cut(s)	129
MslI	CAYNNNNRTG	1 cut(s)	951
MspCI	CTTAAG	1 cut(s)	128
MspI	CCGG	2 cut(s)	217, 755
MspR9I	CCNGG	2 cut(s)	252, 541
MvaI	CCWGG	2 cut(s)	252, 541
MwoI	GCNNNNNNNGC	2 cut(s)	454, 1106
NdeII	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
NlaIII	CATG	6 cut(s)	70, 478, 590, 897, 950, 1019
NlaIV	GGNNCC	3 cut(s)	188, 524, 545
NsiI	ATGCAT	1 cut(s)	895
NspV	TTCGAA	1 cut(s)	193
PaeR7I	CTCGAG	1 cut(s)	567
PciSI	GCTCTTC	1 cut(s)	117
PdmI	GAANNNNTTC	1 cut(s)	902
PfeI	GAWTC	4 cut(s)	164, 362, 593, 1184
PflMI	CCANNNNNTGG	1 cut(s)	668
PkrI	GCNGC	3 cut(s)	159, 325, 459
Psp6I	CCWGG	2 cut(s)	250, 539
PspGI	CCWGG	2 cut(s)	250, 539
PspN4I	GGNNCC	3 cut(s)	188, 524, 545
PspPI	GGNCC	3 cut(s)	281, 446, 493
PspXI	VCTCGAGB	1 cut(s)	567
PstNI	CAGNNNCTG	1 cut(s)	583
PsuI	RGATCY	2 cut(s)	850, 934
RsaI	GTAC	1 cut(s)	721
RsaNI	GTAC	1 cut(s)	720
RseI	CAYNNNNRTG	1 cut(s)	951
SapI	GCTCTTC	1 cut(s)	117
SaqAI	TTAA	1 cut(s)	129
SatI	GCNGC	3 cut(s)	158, 324, 458
Sau3AI	GATC	7 cut(s)	111, 390, 517, 850, 921, 934, 1126
Sau96I	GGNCC	3 cut(s)	281, 446, 493
ScrFI	CCNGG	2 cut(s)	252, 541
SduI	GDGCHC	1 cut(s)	539
SexAI	ACCWGGT	1 cut(s)	539
Sfr274I	CTCGAG	1 cut(s)	567
SfuI	TTCGAA	1 cut(s)	193
SinI	GGWCC	1 cut(s)	493
SlaI	CTCGAG	1 cut(s)	567
SmiMI	CAYNNNNRTG	1 cut(s)	951
SmlI	CTYRAG	2 cut(s)	128, 567
SmoI	CTYRAG	2 cut(s)	128, 567
SsiI	CCGC	3 cut(s)	599, 791, 834
SspMI	CTAG	4 cut(s)	302, 396, 687, 929
StyD4I	CCNGG	2 cut(s)	250, 539
StyI	CCWWGG	1 cut(s)	262
TaaI	ACNGT	1 cut(s)	579
TaiI	ACGT	2 cut(s)	32, 914
TaqI	TCGA	5 cut(s)	193, 210, 568, 906, 924
TatI	WGTACW	1 cut(s)	719
TfiI	GAWTC	4 cut(s)	164, 362, 593, 1184
Tru1I	TTAA	1 cut(s)	129
Tru9I	TTAA	1 cut(s)	129
TscAI	CASTG	1 cut(s)	187
TseI	GCWGC	3 cut(s)	157, 323, 457
TspDTI	ATGAA	6 cut(s)	23, 236, 483, 491, 963, 1106
TspRI	CASTG	1 cut(s)	187
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	1 cut(s)	128
VpaK11BI	GGWCC	1 cut(s)	493
XapI	RAATTY	1 cut(s)	368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	665
XhoI	CTCGAG	1 cut(s)	567
XmnI	GAANNNNTTC	1 cut(s)	902
XspI	CTAG	4 cut(s)	302, 396, 687, 929
ZraI	GACGTC	2 cut(s)	30, 912
Zsp2I	ATGCAT	1 cut(s)	895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.