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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30230 |
| fragaria_vesca | FvH4_4g08220 |
| malus_domestica | MD13G1253900.v1.1 MD16G1257900.v1.1 |
| prunus_persica | Prupe.1G086100_v2.0.a1 |
| pyrus_communis | pycom13g22430 |
| rosa_chinensis | RchiOBHm_Chr4g0402471 |
| rosa_laevigata | RLG00000009081 |
| rosa_multiflora | Rmu_co8180070.1_g000001 Rmu_ssc0000330.1_g000029 |
| rosa_roxburghii | Rroxscaffold_5G00347160 |
| rosa_rugosa | Rorug04G0035700 |
| rosa_samantha | Rh4BG105500 Rh4CG119900 Rh4DG104900 |
| rosa_wichuraiana | Rw4G009060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 359 |
| AccIII | TCCGGA | 1 cut(s) | 811 |
| AciI | CCGC | 4 cut(s) | 345, 366, 466, 719 |
| AcsI | RAATTY | 2 cut(s) | 242, 619 |
| AcuI | CTGAAG | 2 cut(s) | 189, 295 |
| AcyI | GRCGYC | 2 cut(s) | 599, 896 |
| AfaI | GTAC | 1 cut(s) | 907 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 553, 602, 630, 801 |
| AgsI | TTSAA | 3 cut(s) | 50, 385, 585 |
| AjnI | CCWGG | 1 cut(s) | 601 |
| AleI | CACNNNNGTG | 1 cut(s) | 913 |
| AluBI | AGCT | 8 cut(s) | 275, 324, 333, 495, 516, 568, 825, 864 |
| AluI | AGCT | 8 cut(s) | 275, 324, 333, 495, 516, 568, 825, 864 |
| Alw21I | GWGCWC | 1 cut(s) | 827 |
| Alw26I | GTCTC | 2 cut(s) | 25, 838 |
| Ama87I | CYCGRG | 1 cut(s) | 786 |
| Aor13HI | TCCGGA | 1 cut(s) | 811 |
| ApeKI | GCWGC | 2 cut(s) | 513, 864 |
| ApoI | RAATTY | 2 cut(s) | 242, 619 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 42 |
| AspS9I | GGNCC | 2 cut(s) | 727, 871 |
| AsuC2I | CCSGG | 1 cut(s) | 802 |
| AsuHPI | GGTGA | 3 cut(s) | 511, 563, 640 |
| AsuII | TTCGAA | 2 cut(s) | 26, 460 |
| AvaI | CYCGRG | 1 cut(s) | 786 |
| AvaII | GGWCC | 2 cut(s) | 727, 871 |
| BanII | GRGCYC | 2 cut(s) | 827, 839 |
| BauI | CACGAG | 1 cut(s) | 248 |
| BbsI | GAAGAC | 3 cut(s) | 132, 165, 357 |
| Bbv12I | GWGCWC | 1 cut(s) | 827 |
| BbvI | GCAGC | 2 cut(s) | 525, 851 |
| BccI | CCATC | 3 cut(s) | 153, 604, 718 |
| BceAI | ACGGC | 1 cut(s) | 883 |
| BciT130I | CCWGG | 1 cut(s) | 603 |
| BcnI | CCSGG | 1 cut(s) | 802 |
| BcoDI | GTCTC | 2 cut(s) | 25, 838 |
| BfaI | CTAG | 1 cut(s) | 215 |
| BglII | AGATCT | 1 cut(s) | 506 |
| BisI | GCNGC | 2 cut(s) | 514, 865 |
| BlsI | GCNGC | 2 cut(s) | 515, 866 |
| Bme1390I | CCNGG | 2 cut(s) | 603, 802 |
| Bme18I | GGWCC | 2 cut(s) | 727, 871 |
| BmeT110I | CYCGRG | 1 cut(s) | 786 |
| BmgT120I | GGNCC | 2 cut(s) | 727, 871 |
| BmrFI | CCNGG | 2 cut(s) | 603, 802 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BoxI | GACNNNNGTC | 1 cut(s) | 401 |
| BpiI | GAAGAC | 3 cut(s) | 132, 165, 357 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 179, 211 |
| Bpu14I | TTCGAA | 2 cut(s) | 26, 460 |
| BpuEI | CTTGAG | 1 cut(s) | 836 |
| BpuMI | CCSGG | 1 cut(s) | 802 |
| BsaHI | GRCGYC | 2 cut(s) | 599, 896 |
| BsaI | GGTCTC | 1 cut(s) | 25 |
| BsaJI | CCNNGG | 3 cut(s) | 602, 624, 677 |
| BsaWI | WCCGGW | 1 cut(s) | 811 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 308, 338 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 553, 602, 630, 801 |
| Bse118I | RCCGGY | 2 cut(s) | 573, 747 |
| BseAI | TCCGGA | 1 cut(s) | 811 |
| BseBI | CCWGG | 1 cut(s) | 603 |
| BseDI | CCNNGG | 3 cut(s) | 602, 624, 677 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 553, 602, 630, 801 |
| BseMII | CTCAG | 2 cut(s) | 462, 745 |
| BseRI | GAGGAG | 3 cut(s) | 277, 405, 646 |
| BseXI | GCAGC | 2 cut(s) | 525, 851 |
| BsiHKAI | GWGCWC | 1 cut(s) | 827 |
| BsiHKCI | CYCGRG | 1 cut(s) | 786 |
| BsiSI | CCGG | 6 cut(s) | 574, 716, 748, 801, 812, 828 |
| BslFI | GGGAC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 553, 602, 630, 801 |
| BsmAI | GTCTC | 2 cut(s) | 25, 838 |
| BsmFI | GGGAC | 1 cut(s) | 389 |
| Bso31I | GGTCTC | 1 cut(s) | 25 |
| BsoBI | CYCGRG | 1 cut(s) | 786 |
| Bsp119I | TTCGAA | 2 cut(s) | 26, 460 |
| Bsp1286I | GDGCHC | 2 cut(s) | 827, 839 |
| Bsp13I | TCCGGA | 1 cut(s) | 811 |
| Bsp1407I | TGTACA | 1 cut(s) | 905 |
| Bsp143I | GATC | 4 cut(s) | 292, 506, 528, 548 |
| BspACI | CCGC | 4 cut(s) | 345, 366, 466, 719 |
| BspCNI | CTCAG | 2 cut(s) | 463, 744 |
| BspEI | TCCGGA | 1 cut(s) | 811 |
| BspHI | TCATGA | 1 cut(s) | 531 |
| BspT104I | TTCGAA | 2 cut(s) | 26, 460 |
| BspTNI | GGTCTC | 1 cut(s) | 25 |
| BsrFI | RCCGGY | 2 cut(s) | 573, 747 |
| BsrGI | TGTACA | 1 cut(s) | 905 |
| BssAI | RCCGGY | 2 cut(s) | 573, 747 |
| BssECI | CCNNGG | 3 cut(s) | 602, 624, 677 |
| BssMI | GATC | 4 cut(s) | 292, 506, 528, 548 |
| BssNI | GRCGYC | 2 cut(s) | 599, 896 |
| BssSI | CACGAG | 1 cut(s) | 248 |
| Bst2BI | CACGAG | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 1 cut(s) | 603 |
| Bst6I | CTCTTC | 2 cut(s) | 28, 180 |
| BstACI | GRCGYC | 2 cut(s) | 599, 896 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 884 |
| BstAUI | TGTACA | 1 cut(s) | 905 |
| BstBI | TTCGAA | 2 cut(s) | 26, 460 |
| BstDEI | CTNAG | 3 cut(s) | 261, 471, 731 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 628 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstKTI | GATC | 4 cut(s) | 295, 509, 531, 551 |
| BstMAI | GTCTC | 2 cut(s) | 25, 838 |
| BstMBI | GATC | 4 cut(s) | 292, 506, 528, 548 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 188, 321, 330, 574, 757, 884 |
| BstNI | CCWGG | 1 cut(s) | 603 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 401 |
| BstSCI | CCNGG | 2 cut(s) | 601, 800 |
| BstV1I | GCAGC | 2 cut(s) | 525, 851 |
| BstV2I | GAAGAC | 3 cut(s) | 132, 165, 357 |
| BstX2I | RGATCY | 1 cut(s) | 506 |
| BstYI | RGATCY | 1 cut(s) | 506 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| BtsIMutI | CAGTG | 1 cut(s) | 739 |
| CciI | TCATGA | 1 cut(s) | 531 |
| Cfr10I | RCCGGY | 2 cut(s) | 573, 747 |
| Cfr13I | GGNCC | 2 cut(s) | 727, 871 |
| CseI | GACGC | 2 cut(s) | 607, 904 |
| Csp6I | GTAC | 1 cut(s) | 906 |
| CviAII | CATG | 5 cut(s) | 227, 337, 394, 532, 875 |
| CviQI | GTAC | 1 cut(s) | 906 |
| DdeI | CTNAG | 3 cut(s) | 261, 471, 731 |
| DpnI | GATC | 4 cut(s) | 294, 508, 530, 550 |
| DpnII | GATC | 4 cut(s) | 292, 506, 528, 548 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 359 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 359 |
| Eam1104I | CTCTTC | 2 cut(s) | 28, 180 |
| EarI | CTCTTC | 2 cut(s) | 28, 180 |
| EciI | GGCGGA | 2 cut(s) | 334, 734 |
| Ecl136II | GAGCTC | 1 cut(s) | 825 |
| Eco24I | GRGCYC | 2 cut(s) | 827, 839 |
| Eco31I | GGTCTC | 1 cut(s) | 25 |
| Eco47I | GGWCC | 2 cut(s) | 727, 871 |
| Eco53kI | GAGCTC | 1 cut(s) | 825 |
| Eco57I | CTGAAG | 2 cut(s) | 189, 295 |
| Eco88I | CYCGRG | 1 cut(s) | 786 |
| EcoICRI | GAGCTC | 1 cut(s) | 825 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 628 |
| EcoRI | GAATTC | 2 cut(s) | 242, 619 |
| EcoRII | CCWGG | 1 cut(s) | 601 |
| EcoT38I | GRGCYC | 2 cut(s) | 827, 839 |
| FaeI | CATG | 5 cut(s) | 230, 340, 397, 535, 878 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 30, 62 |
| FaqI | GGGAC | 1 cut(s) | 389 |
| FatI | CATG | 5 cut(s) | 226, 336, 393, 531, 874 |
| FauI | CCCGC | 1 cut(s) | 359 |
| Fnu4HI | GCNGC | 2 cut(s) | 514, 865 |
| FokI | GGATG | 1 cut(s) | 99 |
| FriOI | GRGCYC | 2 cut(s) | 827, 839 |
| Fsp4HI | GCNGC | 2 cut(s) | 514, 865 |
| FspBI | CTAG | 1 cut(s) | 215 |
| GluI | GCNGC | 2 cut(s) | 514, 865 |
| HapII | CCGG | 6 cut(s) | 574, 716, 748, 801, 812, 828 |
| HgaI | GACGC | 2 cut(s) | 607, 904 |
| Hin1I | GRCGYC | 2 cut(s) | 599, 896 |
| Hin1II | CATG | 5 cut(s) | 230, 340, 397, 535, 878 |
| HindIII | AAGCTT | 1 cut(s) | 566 |
| HinfI | GANTC | 3 cut(s) | 431, 473, 754 |
| HpaII | CCGG | 6 cut(s) | 574, 716, 748, 801, 812, 828 |
| HphI | GGTGA | 3 cut(s) | 511, 563, 640 |
| Hpy166II | GTNNAC | 3 cut(s) | 238, 771, 908 |
| Hpy188I | TCNGA | 7 cut(s) | 169, 292, 328, 472, 484, 649, 822 |
| Hpy188III | TCNNGA | 3 cut(s) | 532, 742, 812 |
| Hpy8I | GTNNAC | 3 cut(s) | 238, 771, 908 |
| Hpy99I | CGWCG | 3 cut(s) | 282, 601, 898 |
| HpyAV | CCTTC | 4 cut(s) | 111, 218, 391, 456 |
| HpyCH4V | TGCA | 4 cut(s) | 182, 513, 867, 878 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 188, 321, 330, 574, 757, 884 |
| HpyF3I | CTNAG | 3 cut(s) | 261, 471, 731 |
| Hsp92I | GRCGYC | 2 cut(s) | 599, 896 |
| Hsp92II | CATG | 5 cut(s) | 230, 340, 397, 535, 878 |
| Kpn2I | TCCGGA | 1 cut(s) | 811 |
| Kzo9I | GATC | 4 cut(s) | 292, 506, 528, 548 |
| LmnI | GCTCC | 4 cut(s) | 329, 418, 822, 830 |
| LpnPI | CCDG | 9 cut(s) | 539, 587, 588, 615, 729, 761, 814, 825, 841 |
| Lsp1109I | GCAGC | 2 cut(s) | 525, 851 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeI | CTAG | 1 cut(s) | 215 |
| MaeIII | GTNAC | 4 cut(s) | 486, 499, 734, 889 |
| MalI | GATC | 4 cut(s) | 294, 508, 530, 550 |
| MboI | GATC | 4 cut(s) | 292, 506, 528, 548 |
| MflI | RGATCY | 1 cut(s) | 506 |
| MhlI | GDGCHC | 2 cut(s) | 827, 839 |
| MluCI | AATT | 4 cut(s) | 108, 133, 242, 619 |
| MlyI | GAGTC | 1 cut(s) | 482 |
| MmeI | TCCRAC | 2 cut(s) | 351, 619 |
| MroI | TCCGGA | 1 cut(s) | 811 |
| MroXI | GAANNNNTTC | 1 cut(s) | 42 |
| MslI | CAYNNNNRTG | 3 cut(s) | 776, 879, 913 |
| MspI | CCGG | 6 cut(s) | 574, 716, 748, 801, 812, 828 |
| MspR9I | CCNGG | 2 cut(s) | 603, 802 |
| MvaI | CCWGG | 1 cut(s) | 603 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 188, 321, 330, 574, 757, 884 |
| NciI | CCSGG | 1 cut(s) | 802 |
| NdeII | GATC | 4 cut(s) | 292, 506, 528, 548 |
| NlaIII | CATG | 5 cut(s) | 230, 340, 397, 535, 878 |
| NmeAIII | GCCGAG | 1 cut(s) | 702 |
| NmuCI | GTSAC | 2 cut(s) | 499, 734 |
| NspV | TTCGAA | 2 cut(s) | 26, 460 |
| OliI | CACNNNNGTG | 1 cut(s) | 913 |
| PagI | TCATGA | 1 cut(s) | 531 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 246, 773 |
| PdmI | GAANNNNTTC | 1 cut(s) | 42 |
| PfeI | GAWTC | 2 cut(s) | 431, 754 |
| PflFI | GACNNNGTC | 1 cut(s) | 233 |
| PkrI | GCNGC | 2 cut(s) | 515, 866 |
| PleI | GAGTC | 1 cut(s) | 481 |
| PpsI | GAGTC | 1 cut(s) | 481 |
| PshAI | GACNNNNGTC | 1 cut(s) | 401 |
| Psp124BI | GAGCTC | 1 cut(s) | 827 |
| Psp6I | CCWGG | 1 cut(s) | 601 |
| PspGI | CCWGG | 1 cut(s) | 601 |
| PspPI | GGNCC | 2 cut(s) | 727, 871 |
| PsuI | RGATCY | 1 cut(s) | 506 |
| PsyI | GACNNNGTC | 1 cut(s) | 233 |
| RsaI | GTAC | 1 cut(s) | 907 |
| RsaNI | GTAC | 1 cut(s) | 906 |
| RseI | CAYNNNNRTG | 3 cut(s) | 776, 879, 913 |
| SacI | GAGCTC | 1 cut(s) | 827 |
| SatI | GCNGC | 2 cut(s) | 514, 865 |
| Sau3AI | GATC | 4 cut(s) | 292, 506, 528, 548 |
| Sau96I | GGNCC | 2 cut(s) | 727, 871 |
| SchI | GAGTC | 1 cut(s) | 482 |
| ScrFI | CCNGG | 2 cut(s) | 603, 802 |
| SduI | GDGCHC | 2 cut(s) | 827, 839 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| SfuI | TTCGAA | 2 cut(s) | 26, 460 |
| SinI | GGWCC | 2 cut(s) | 727, 871 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 776, 879, 913 |
| SmlI | CTYRAG | 1 cut(s) | 851 |
| SmoI | CTYRAG | 1 cut(s) | 851 |
| Sse9I | AATT | 4 cut(s) | 108, 133, 242, 619 |
| SsiI | CCGC | 4 cut(s) | 345, 366, 466, 719 |
| SspMI | CTAG | 1 cut(s) | 215 |
| SstI | GAGCTC | 1 cut(s) | 827 |
| StyD4I | CCNGG | 2 cut(s) | 601, 800 |
| TaqI | TCGA | 4 cut(s) | 26, 303, 460, 562 |
| TaqII | GACCGA | 1 cut(s) | 413 |
| TasI | AATT | 4 cut(s) | 108, 133, 242, 619 |
| TatI | WGTACW | 1 cut(s) | 905 |
| TfiI | GAWTC | 2 cut(s) | 431, 754 |
| TscAI | CASTG | 1 cut(s) | 739 |
| TseFI | GTSAC | 2 cut(s) | 499, 734 |
| TseI | GCWGC | 2 cut(s) | 513, 864 |
| Tsp45I | GTSAC | 2 cut(s) | 499, 734 |
| TspDTI | ATGAA | 4 cut(s) | 84, 93, 101, 325 |
| TspRI | CASTG | 1 cut(s) | 739 |
| Tth111I | GACNNNGTC | 1 cut(s) | 233 |
| VpaK11BI | GGWCC | 2 cut(s) | 727, 871 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 628 |
| XapI | RAATTY | 2 cut(s) | 242, 619 |
| XmnI | GAANNNNTTC | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 215 |