Prupe.1G086300_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
6415891 .. 6423749
7859 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G086300.1

Sequence Viewer

Length: 1698 bp
ATGGCTGTCAATAAACCATTATCATCTCATGATGCCATGGAGTTGGATAAGGACTGCTCAATTGTGCTTGAACTATCTGAAAGTGACCCCCTTTTTGATAAAAAGAAGAAATTGCTACAAGATATGGGATTTAGTACCAAGGAAGAAATACATGTTAAAAGGTCTTCAGATCCTAATTGGATCAGTACCTCCTTGAAAGTAATGCTTCAGATCGAAAGAATCATAAACTCAGATGAGACAGAGCTTTATTTTGCTGGAGATGAACCAATGGATATGTATGGCCCCAGAAATGAGCTAGAGGCTCTCAATTCAATCCTTCAGCTTGTTGAAAGCTCACTATCTAGTGCTTGTCTAATGCAAAAGAATGTCCTGCAAGAATTCCGCGATGCTATTGTTGATATGATGAGTCAGTCTGGGAACAAGAACATTTTGGAGACTACAATTGTAGAAGGCTACAACTCTGATAAAGAAATAAAATTGTTACAATGGGGTGAAAACAATGGTGTCAAGACAAGGTTGGAGATAGCTTATGTCGAAGGGGCTGGCAGAGGAGCCATAGCTACAGAGGATCTGAAAGTTGGAGATACTGCTTTGGAGATCCCGACATCTTTAATAATTGTTGAGGAGCTTGTGCAAGCTGATATGTATCATGCATTAGAGAAGTTTGAAGGCATTTCCTCTGAGACGATGTTGTTGTTGTGGAGCATGAAGGAGAGGCATAATGGTGATTCACAATTCAAGATCTACTTTGACACACTGCCAGAAGAATTTCATACTGGGTTGAGTTTTGGAATTGATGCGATGATGGTTTTGGATGGAACCTTGCTGTTGGATGAGATTACGGCAGCCAAAGAGCATTTGCGTGCTCAATATGATGATCTCTTCCCTGGACTGTGCGAAGATCATCCTGATATCTTTCCACCAGAGCTTTACACATGGGAACTATTCTTGTGGGCATGTGAACTGTGGTACTCAAATAGCATGAAAATCAAGTTCCCTGATGGAAAGCTGAGGACATGCTTGATTCCCATTGCTGGCTTCTTGAACCATTCGCTAGACCCCCATGTAGTGCACTATGGCAGAGTAGATTCTGCAACAAATACCTTGAAATTCCGTCTATCAAGACCATGCAATGCAGGGCAAGAATGCTGTCTTAGTTATGGAAACTTCTCTAGTTCTCATCTAATTACCTTCTATGGCTTTGTACCTCAAGGTGACAACCTATACGATGTCATTCCTCTAGATATTGATGCTGCCCAAGATGATTTTACTGAAGGCAGCTCCATATCAAACTGGACCACTCACATGGTGCGGGCTACTTGGTTATCACATAACTGCAATATTTTCTATTACGGCCTGCCTTCCCCATTCTTGGACTGCCTAAGGAGAGCTCGGAGCCCCATGCCGCATACTAAGGACCTACTGCCGGAAAATTTGAAGAATGAAATTGAAATTCTTGAAGATCTTCGCGCCATCTGTGATGACATGATGGATAATCTTGGTGATGCAGACCTTGATGACAGAAAAAACACTAATTGGGATGTAAAGCTGGCAATCAAGTTCAAAGATATACAAAGAAGTATTGTCTCTTCAGTTTTAACTTCATGTTATTGTGGCCTGAAACTGGTGAAAGATGAATTGTCTAAATGCCTGGCTGAGGACACTCCTGTCTCAAAGCAGATTGAAGTTTACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

566

Amino Acids

64.07

Weight (kDa)

4.68

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1667
AccII CGCG 2 cut(s) 384, 1470
AciI CCGC 3 cut(s) 382, 1312, 1406
AclWI GGATC 4 cut(s) 164, 188, 576, 592
AcsI RAATTY 5 cut(s) 377, 767, 1109, 1432, 1452
AcuI CTGAAG 5 cut(s) 150, 191, 302, 1293, 1575
AdeI CACNNNGTG 1 cut(s) 1309
AfaI GTAC 4 cut(s) 136, 187, 971, 1206
AfiI CCNNNNNNNGG 5 cut(s) 1034, 1372, 1426, 1624, 1657
AflIII ACRYGT 1 cut(s) 151
AjnI CCWGG 2 cut(s) 886, 1650
Alw21I GWGCWC 3 cut(s) 868, 1074, 1393
Alw26I GTCTC 5 cut(s) 230, 428, 677, 1591, 1675
Alw44I GTGCAC 1 cut(s) 1070
AlwI GGATC 4 cut(s) 164, 188, 576, 592
AoxI GGCC 3 cut(s) 280, 1354, 1615
ApaLI GTGCAC 1 cut(s) 1070
ApeKI GCWGC 3 cut(s) 845, 1253, 1278
ApoI RAATTY 5 cut(s) 377, 767, 1109, 1432, 1452
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
Asp700I GAANNNNTTC 2 cut(s) 768, 1464
AspLEI GCGC 1 cut(s) 1472
AspS9I GGNCC 3 cut(s) 281, 1296, 1417
AsuHPI GGTGA 5 cut(s) 503, 737, 1226, 1514, 1639
AvaII GGWCC 2 cut(s) 1296, 1417
AxyI CCTNAGG 1 cut(s) 1382
BaeGI GKGCMC 1 cut(s) 1074
BanII GRGCYC 2 cut(s) 1393, 1400
BarI GAAGNNNNNNTAC 2 cut(s) 1573, 1605
BbsI GAAGAC 1 cut(s) 156
Bbv12I GWGCWC 3 cut(s) 868, 1074, 1393
BbvCI CCTCAGC 2 cut(s) 1010, 1656
BbvI GCAGC 3 cut(s) 857, 1240, 1290
BccI CCATC 5 cut(s) 799, 809, 995, 1481, 1483
BceAI ACGGC 2 cut(s) 858, 1369
BciT130I CCWGG 2 cut(s) 888, 1652
BcoDI GTCTC 5 cut(s) 230, 428, 677, 1591, 1675
BfaI CTAG 5 cut(s) 296, 342, 1055, 1173, 1241
BfmI CTRYAG 1 cut(s) 561
BglII AGATCT 2 cut(s) 741, 1462
BisI GCNGC 4 cut(s) 846, 1254, 1279, 1406
BlsI GCNGC 4 cut(s) 847, 1255, 1280, 1407
Bme1390I CCNGG 2 cut(s) 888, 1652
Bme18I GGWCC 2 cut(s) 1296, 1417
BmgT120I GGNCC 3 cut(s) 281, 1296, 1417
BmiI GGNNCC 4 cut(s) 283, 553, 820, 1397
BmrFI CCNGG 2 cut(s) 888, 1652
BmrI ACTGGG 1 cut(s) 786
BmsI GCATC 5 cut(s) 22, 376, 787, 1240, 1495
BmuI ACTGGG 1 cut(s) 786
BpiI GAAGAC 1 cut(s) 156
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 2 cut(s) 1010, 1656
BpuEI CTTGAG 1 cut(s) 1194
BsaBI GATNNNNATC 1 cut(s) 645
BsaJI CCNNGG 3 cut(s) 36, 138, 886
Bsc4I CCNNNNNNNGG 5 cut(s) 1034, 1372, 1426, 1624, 1657
Bse1I ACTGG 3 cut(s) 781, 1298, 1629
Bse21I CCTNAGG 1 cut(s) 1382
Bse3DI GCAATG 2 cut(s) 1029, 1138
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 2 cut(s) 888, 1652
BseDI CCNNGG 3 cut(s) 36, 138, 886
BseGI GGATG 4 cut(s) 820, 838, 904, 1546
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 5 cut(s) 1034, 1372, 1426, 1624, 1657
BseMI GCAATG 2 cut(s) 1029, 1138
BseMII CTCAG 4 cut(s) 243, 672, 1001, 1647
BseNI ACTGG 3 cut(s) 781, 1298, 1629
BseRI GAGGAG 2 cut(s) 564, 638
BseSI GKGCMC 1 cut(s) 1074
BseXI GCAGC 3 cut(s) 857, 1240, 1290
Bsh1236I CGCG 2 cut(s) 384, 1470
BshFI GGCC 3 cut(s) 282, 1356, 1617
BsiHKAI GWGCWC 3 cut(s) 868, 1074, 1393
BsiSI CCGG 1 cut(s) 1427
BslI CCNNNNNNNGG 5 cut(s) 1034, 1372, 1426, 1624, 1657
BsmAI GTCTC 5 cut(s) 230, 428, 677, 1591, 1675
BsmBI CGTCTC 1 cut(s) 677
BsmI GAATGC 1 cut(s) 1151
BsnI GGCC 3 cut(s) 282, 1356, 1617
Bsp1286I GDGCHC 4 cut(s) 868, 1074, 1393, 1400
Bsp143I GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
Bsp19I CCATGG 1 cut(s) 36
BspACI CCGC 3 cut(s) 382, 1312, 1406
BspANI GGCC 3 cut(s) 282, 1356, 1617
BspCNI CTCAG 4 cut(s) 242, 673, 1002, 1648
BspFNI CGCG 2 cut(s) 384, 1470
BspHI TCATGA 1 cut(s) 28
BspLI GGNNCC 4 cut(s) 283, 553, 820, 1397
BspPI GGATC 4 cut(s) 164, 188, 576, 592
BsrDI GCAATG 2 cut(s) 1029, 1138
BsrI ACTGG 3 cut(s) 781, 1298, 1629
BssECI CCNNGG 3 cut(s) 36, 138, 886
BssMI GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
BssT1I CCWWGG 2 cut(s) 36, 138
Bst2UI CCWGG 2 cut(s) 888, 1652
Bst4CI ACNGT 2 cut(s) 894, 966
Bst6I CTCTTC 2 cut(s) 887, 1594
BstC8I GCNNGC 7 cut(s) 544, 636, 864, 1036, 1314, 1358, 1551
BstDEI CTNAG 7 cut(s) 229, 681, 1010, 1154, 1382, 1413, 1656
BstDSI CCRYGG 1 cut(s) 36
BstENI CCTNNNNNAGG 1 cut(s) 1655
BstF5I GGATG 4 cut(s) 820, 838, 904, 1546
BstFNI CGCG 2 cut(s) 384, 1470
BstHHI GCGC 1 cut(s) 1472
BstKTI GATC 9 cut(s) 172, 183, 213, 571, 600, 744, 880, 904, 1465
BstMAI GTCTC 5 cut(s) 230, 428, 677, 1591, 1675
BstMBI GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
BstNI CCWGG 2 cut(s) 888, 1652
BstNSI RCATGY 3 cut(s) 155, 960, 1020
BstSCI CCNGG 2 cut(s) 886, 1650
BstSFI CTRYAG 1 cut(s) 561
BstSLI GKGCMC 1 cut(s) 1074
BstUI CGCG 2 cut(s) 384, 1470
BstV1I GCAGC 3 cut(s) 857, 1240, 1290
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 5 cut(s) 169, 568, 597, 741, 1462
BstXI CCANNNNNNTGG 2 cut(s) 43, 1306
BstYI RGATCY 5 cut(s) 169, 568, 597, 741, 1462
Bsu36I CCTNAGG 1 cut(s) 1382
BsuRI GGCC 3 cut(s) 282, 1356, 1617
BtgI CCRYGG 1 cut(s) 36
BtgZI GCGATG 2 cut(s) 399, 815
BtsCI GGATG 4 cut(s) 820, 838, 904, 1546
BtsI GCAGTG 1 cut(s) 755
BtsIMutI CAGTG 1 cut(s) 755
Cac8I GCNNGC 7 cut(s) 544, 636, 864, 1036, 1314, 1358, 1551
CciI TCATGA 1 cut(s) 28
CfoI GCGC 1 cut(s) 1472
Cfr13I GGNCC 3 cut(s) 281, 1296, 1417
Csp6I GTAC 4 cut(s) 135, 186, 970, 1205
CviQI GTAC 4 cut(s) 135, 186, 970, 1205
DdeI CTNAG 7 cut(s) 229, 681, 1010, 1154, 1382, 1413, 1656
DpnI GATC 9 cut(s) 171, 182, 212, 570, 599, 743, 879, 903, 1464
DpnII GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
DraIII CACNNNGTG 1 cut(s) 1309
DrdI GACNNNNNNGTC 1 cut(s) 1667
DseDI GACNNNNNNGTC 1 cut(s) 1667
Eam1104I CTCTTC 2 cut(s) 887, 1594
EarI CTCTTC 2 cut(s) 887, 1594
Ecl136II GAGCTC 1 cut(s) 1391
Eco130I CCWWGG 2 cut(s) 36, 138
Eco24I GRGCYC 2 cut(s) 1393, 1400
Eco32I GATATC 1 cut(s) 913
Eco47I GGWCC 2 cut(s) 1296, 1417
Eco53kI GAGCTC 1 cut(s) 1391
Eco57I CTGAAG 5 cut(s) 150, 191, 302, 1293, 1575
Eco81I CCTNAGG 1 cut(s) 1382
EcoICRI GAGCTC 1 cut(s) 1391
EcoNI CCTNNNNNAGG 1 cut(s) 1655
EcoO109I RGGNCCY 1 cut(s) 1417
EcoRI GAATTC 1 cut(s) 377
EcoRII CCWGG 2 cut(s) 886, 1650
EcoRV GATATC 1 cut(s) 913
EcoT14I CCWWGG 2 cut(s) 36, 138
EcoT22I ATGCAT 1 cut(s) 655
EcoT38I GRGCYC 2 cut(s) 1393, 1400
ErhI CCWWGG 2 cut(s) 36, 138
Esp3I CGTCTC 1 cut(s) 677
FalI AAGNNNNNCTT 4 cut(s) 189, 221, 731, 763
FauI CCCGC 1 cut(s) 1305
Fnu4HI GCNGC 4 cut(s) 846, 1254, 1279, 1406
FokI GGATG 4 cut(s) 827, 845, 891, 1553
FriOI GRGCYC 2 cut(s) 1393, 1400
Fsp4HI GCNGC 4 cut(s) 846, 1254, 1279, 1406
FspBI CTAG 5 cut(s) 296, 342, 1055, 1173, 1241
GlaI GCGC 1 cut(s) 1471
GluI GCNGC 4 cut(s) 846, 1254, 1279, 1406
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 3 cut(s) 282, 1356, 1617
HapII CCGG 1 cut(s) 1427
HhaI GCGC 1 cut(s) 1472
Hin6I GCGC 1 cut(s) 1470
HinP1I GCGC 1 cut(s) 1470
HinfI GANTC 5 cut(s) 219, 406, 728, 1024, 1088
HpaII CCGG 1 cut(s) 1427
HphI GGTGA 5 cut(s) 503, 737, 1226, 1514, 1639
Hpy166II GTNNAC 3 cut(s) 962, 1072, 1690
Hpy188I TCNGA 8 cut(s) 79, 169, 210, 232, 463, 573, 682, 1395
Hpy188III TCNNGA 9 cut(s) 29, 508, 601, 739, 908, 1042, 1122, 1241, 1457
Hpy8I GTNNAC 3 cut(s) 962, 1072, 1690
HpyAV CCTTC 8 cut(s) 326, 443, 530, 662, 703, 1201, 1268, 1371
HpyCH4III ACNGT 2 cut(s) 894, 966
HpyF3I CTNAG 7 cut(s) 229, 681, 1010, 1154, 1382, 1413, 1656
HspAI GCGC 1 cut(s) 1470
Kzo9I GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
LmnI GCTCC 5 cut(s) 551, 625, 702, 1286, 1395
Lsp1109I GCAGC 3 cut(s) 857, 1240, 1290
LweI GCATC 5 cut(s) 22, 376, 787, 1240, 1495
MaeI CTAG 5 cut(s) 296, 342, 1055, 1173, 1241
MaeIII GTNAC 3 cut(s) 83, 480, 1214
MalI GATC 9 cut(s) 171, 182, 212, 570, 599, 743, 879, 903, 1464
MboI GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
MfeI CAATTG 2 cut(s) 60, 441
MflI RGATCY 5 cut(s) 169, 568, 597, 741, 1462
MhlI GDGCHC 4 cut(s) 868, 1074, 1393, 1400
MlyI GAGTC 1 cut(s) 415
MmeI TCCRAC 4 cut(s) 24, 498, 559, 810
Mph1103I ATGCAT 1 cut(s) 655
MroXI GAANNNNTTC 2 cut(s) 768, 1464
MseI TTAA 3 cut(s) 156, 611, 1598
MslI CAYNNNNRTG 3 cut(s) 723, 861, 1304
MspI CCGG 1 cut(s) 1427
MspR9I CCNGG 2 cut(s) 888, 1652
MunI CAATTG 2 cut(s) 60, 441
Mva1269I GAATGC 1 cut(s) 1151
MvaI CCWGG 2 cut(s) 888, 1652
MvnI CGCG 2 cut(s) 384, 1470
NcoI CCATGG 1 cut(s) 36
NdeII GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
NlaIV GGNNCC 4 cut(s) 283, 553, 820, 1397
NmuCI GTSAC 2 cut(s) 83, 1214
NsiI ATGCAT 1 cut(s) 655
NspI RCATGY 3 cut(s) 155, 960, 1020
PagI TCATGA 1 cut(s) 28
PciI ACATGT 1 cut(s) 151
PctI GAATGC 1 cut(s) 1151
PdmI GAANNNNTTC 2 cut(s) 768, 1464
PfeI GAWTC 4 cut(s) 219, 728, 1024, 1088
PkrI GCNGC 4 cut(s) 847, 1255, 1280, 1407
PleI GAGTC 1 cut(s) 414
PpsI GAGTC 1 cut(s) 414
PpuMI RGGWCCY 1 cut(s) 1417
PscI ACATGT 1 cut(s) 151
Psp124BI GAGCTC 1 cut(s) 1393
Psp5II RGGWCCY 1 cut(s) 1417
Psp6I CCWGG 2 cut(s) 886, 1650
PspGI CCWGG 2 cut(s) 886, 1650
PspN4I GGNNCC 4 cut(s) 283, 553, 820, 1397
PspPI GGNCC 3 cut(s) 281, 1296, 1417
PspPPI RGGWCCY 1 cut(s) 1417
PsuI RGATCY 5 cut(s) 169, 568, 597, 741, 1462
RsaI GTAC 4 cut(s) 136, 187, 971, 1206
RsaNI GTAC 4 cut(s) 135, 186, 970, 1205
RseI CAYNNNNRTG 3 cut(s) 723, 861, 1304
SacI GAGCTC 1 cut(s) 1393
SaqAI TTAA 3 cut(s) 156, 611, 1598
SatI GCNGC 4 cut(s) 846, 1254, 1279, 1406
Sau3AI GATC 9 cut(s) 169, 180, 210, 568, 597, 741, 877, 901, 1462
Sau96I GGNCC 3 cut(s) 281, 1296, 1417
SchI GAGTC 1 cut(s) 415
ScrFI CCNGG 2 cut(s) 888, 1652
SduI GDGCHC 4 cut(s) 868, 1074, 1393, 1400
SfaNI GCATC 5 cut(s) 22, 376, 787, 1240, 1495
SfcI CTRYAG 1 cut(s) 561
SinI GGWCC 2 cut(s) 1296, 1417
SmiMI CAYNNNNRTG 3 cut(s) 723, 861, 1304
SmlI CTYRAG 1 cut(s) 1209
SmoI CTYRAG 1 cut(s) 1209
SsiI CCGC 3 cut(s) 382, 1312, 1406
SspI AATATT 1 cut(s) 1342
SspMI CTAG 5 cut(s) 296, 342, 1055, 1173, 1241
SstI GAGCTC 1 cut(s) 1393
StyD4I CCNGG 2 cut(s) 886, 1650
StyI CCWWGG 2 cut(s) 36, 138
TaaI ACNGT 2 cut(s) 894, 966
TaqI TCGA 2 cut(s) 213, 534
TauI GCSGC 1 cut(s) 1408
TfiI GAWTC 4 cut(s) 219, 728, 1024, 1088
Tru1I TTAA 3 cut(s) 156, 611, 1598
Tru9I TTAA 3 cut(s) 156, 611, 1598
TscAI CASTG 1 cut(s) 762
TseFI GTSAC 2 cut(s) 83, 1214
TseI GCWGC 3 cut(s) 845, 1253, 1278
Tsp45I GTSAC 2 cut(s) 83, 1214
TspDTI ATGAA 7 cut(s) 276, 722, 761, 998, 1458, 1593, 1650
TspGWI ACGGA 1 cut(s) 1103
TspRI CASTG 1 cut(s) 762
VneI GTGCAC 1 cut(s) 1070
VpaK11BI GGWCC 2 cut(s) 1296, 1417
XagI CCTNNNNNAGG 1 cut(s) 1655
XapI RAATTY 5 cut(s) 377, 767, 1109, 1432, 1452
XbaI TCTAGA 1 cut(s) 1240
XceI RCATGY 3 cut(s) 155, 960, 1020
XmnI GAANNNNTTC 2 cut(s) 768, 1464
XspI CTAG 5 cut(s) 296, 342, 1055, 1173, 1241
Zsp2I ATGCAT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.