Prupe.1G086900_v2.0.a1

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013382
Physical Location & Seq
Reverse (-)
6483506 .. 6484492
987 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G086900.1

Sequence Viewer

Length: 987 bp
ATGAAGACACCAAGGCCAGACGGGCTACGTTTTATTGCTCCTTCTTTGTTCTTCATTTGTTTCCTCTATGTTTTGGCTTCTATATCCGAACTGCGATTCGACAGTCTTCTGAAATTTGGTCGTTGTGCTCTTGCCAACATCAACATGCCCTCTGCTCAGTTGTATAATTCATCAAACACTTCGCATTCATCACCAAACATCACTTCACTGGCCCTTAATTCTTCCTCAAACGATGAAATCCGAGTACTTTTCGGAATTCTAACACTTCCTGGCCAATACCAACGCCGCCATTTCCTTCGTTTGATCTATGGCACACAGACTCCGGTCGGCGCAAAAGTGGACGTGAAGTTTGTGATGTGCAACCTCACCAAGGAAGAACAAGAAGTGCTTGTAGCATTGGAAATAATGCGTTATGATGATATTATTATTCTCGATTGCGAAGAGAACATGAACAAGGGTAAGACTTACACCTACTTTTCGAGCTTGCCCGAGATGTTCAACAATACAAATGGGGTTTATCCACCTTACCATTATGTAATGAAAGCTGACGATGATGCCTACTTCAGGCTGCAGAACTTGGTGGACTCTCTGAAGCCGTTGCCTAGAGAAGACTTGTACTATGGTTATGTTATTCCATGTTCAAGCATGGAGCCGTTTGGTCACTACATGTCTGGCATGGGGTACTTGATTTCTTGGGACATAGTGGAGTGGATCAGAGAATCTGATATCCCCAAGAGCCACTTAGAAGGGCCTGAAGATAAAACTTTTGGTGACTGGATAAAAAATGGACATCGTGCTAAGAACAGGTTCCATGCTAAGTGGTCCATGTACAATTTTCCTGAGCCACCCACGAAATGTACACATGAGCTTTGGCCACACACAATTGCAGTTCATTTGTTGAAGAACCAAGAAAAATGGATTAGGACATTGAAGTATTTTAATGTCACTGATAATCTCAAGCCTTCCAAATTGTACCATATACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Galactosyl_T

Protein Analysis

329

Amino Acids

38.1

Weight (kDa)

7.16

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013382)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57500
fragaria_vesca FvH4_4g09410
malus_domestica MD13G1256400.v1.1
prunus_persica Prupe.1G086900_v2.0.a1 Prupe.1G087000_v2.0.a1
pyrus_communis pycom13g22010
rosa_chinensis RchiOBHm_Chr4g0402651
rosa_laevigata RLG00000009054
rosa_multiflora Rmu_sc0009850.1_g000009 Rmu_sc0013411.1_g000002
rosa_roxburghii Rroxscaffold_5G00347400
rosa_rugosa Rorug04G0037400
rosa_samantha Rh4AG115000 Rh4BG107600 Rh4CG121900 Rh4DG107400
rosa_wichuraiana Rw0G015100 Rw4G009170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 286
AclWI GGATC 1 cut(s) 719
AcoI YGGCCR 2 cut(s) 271, 872
AcsI RAATTY 2 cut(s) 113, 255
AcuI CTGAAG 3 cut(s) 547, 611, 774
AfaI GTAC 6 cut(s) 246, 617, 683, 830, 859, 974
AfiI CCNNNNNNNGG 2 cut(s) 370, 564
AflIII ACRYGT 1 cut(s) 666
AgsI TTSAA 4 cut(s) 499, 642, 901, 931
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 1 cut(s) 268
AjuI GAANNNNNNNTTGG 2 cut(s) 187, 219
AluBI AGCT 3 cut(s) 483, 545, 868
AluI AGCT 3 cut(s) 483, 545, 868
Alw21I GWGCWC 1 cut(s) 130
AlwI GGATC 1 cut(s) 719
Ama87I CYCGRG 1 cut(s) 488
AoxI GGCC 5 cut(s) 14, 210, 271, 749, 872
ApeKI GCWGC 1 cut(s) 568
ApoI RAATTY 2 cut(s) 113, 255
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
Asp700I GAANNNNTTC 1 cut(s) 806
AspLEI GCGC 1 cut(s) 332
AspS9I GGNCC 3 cut(s) 211, 749, 822
AsuHPI GGTGA 3 cut(s) 183, 358, 782
AvaI CYCGRG 1 cut(s) 488
AvaII GGWCC 1 cut(s) 822
BalI TGGCCA 2 cut(s) 273, 874
BbsI GAAGAC 3 cut(s) 11, 98, 615
Bbv12I GWGCWC 1 cut(s) 130
BbvI GCAGC 1 cut(s) 555
BceAI ACGGC 2 cut(s) 580, 637
BciT130I CCWGG 1 cut(s) 270
BfaI CTAG 1 cut(s) 603
BfmI CTRYAG 1 cut(s) 569
BglI GCCNNNNNGGC 1 cut(s) 22
BisI GCNGC 2 cut(s) 286, 569
BlsI GCNGC 2 cut(s) 287, 570
BmcAI AGTACT 1 cut(s) 246
Bme1390I CCNGG 1 cut(s) 270
Bme18I GGWCC 1 cut(s) 822
BmeT110I CYCGRG 1 cut(s) 488
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 3 cut(s) 211, 749, 822
BmiI GGNNCC 2 cut(s) 651, 809
BmrFI CCNGG 1 cut(s) 270
BmsI GCATC 1 cut(s) 544
BoxI GACNNNNGTC 1 cut(s) 323
BpiI GAAGAC 3 cut(s) 11, 98, 615
Bpu10I CCTNAGC 1 cut(s) 840
BpuEI CTTGAG 1 cut(s) 941
BsaJI CCNNGG 2 cut(s) 11, 369
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 2 cut(s) 304, 334
Bsc4I CCNNNNNNNGG 2 cut(s) 370, 564
Bse1I ACTGG 2 cut(s) 213, 779
BseBI CCWGG 1 cut(s) 270
BseDI CCNNGG 2 cut(s) 11, 369
BseLI CCNNNNNNNGG 2 cut(s) 370, 564
BseMII CTCAG 2 cut(s) 170, 831
BseNI ACTGG 2 cut(s) 213, 779
BseXI GCAGC 1 cut(s) 555
Bsh1285I CGRYCG 1 cut(s) 327
BshFI GGCC 5 cut(s) 16, 212, 273, 751, 874
BsiEI CGRYCG 1 cut(s) 327
BsiHKAI GWGCWC 1 cut(s) 130
BsiHKCI CYCGRG 1 cut(s) 488
BsiSI CCGG 1 cut(s) 323
BslFI GGGAC 1 cut(s) 710
BslI CCNNNNNNNGG 2 cut(s) 370, 564
BsmFI GGGAC 1 cut(s) 710
BsmI GAATGC 1 cut(s) 184
BsnI GGCC 5 cut(s) 16, 212, 273, 751, 874
BsoBI CYCGRG 1 cut(s) 488
Bsp1286I GDGCHC 1 cut(s) 130
Bsp1407I TGTACA 2 cut(s) 828, 857
Bsp143I GATC 2 cut(s) 303, 711
BspACI CCGC 1 cut(s) 286
BspANI GGCC 5 cut(s) 16, 212, 273, 751, 874
BspCNI CTCAG 2 cut(s) 169, 832
BspLI GGNNCC 2 cut(s) 651, 809
BspMAI CTGCAG 1 cut(s) 573
BspPI GGATC 1 cut(s) 719
BsrGI TGTACA 2 cut(s) 828, 857
BsrI ACTGG 2 cut(s) 213, 779
BssECI CCNNGG 2 cut(s) 11, 369
BssMI GATC 2 cut(s) 303, 711
BssT1I CCWWGG 2 cut(s) 11, 369
Bst2UI CCWGG 1 cut(s) 270
Bst4CI ACNGT 1 cut(s) 104
Bst6I CTCTTC 1 cut(s) 435
BstAUI TGTACA 2 cut(s) 828, 857
BstC8I GCNNGC 1 cut(s) 485
BstDEI CTNAG 5 cut(s) 156, 742, 798, 816, 840
BstENI CCTNNNNNAGG 2 cut(s) 368, 562
BstHHI GCGC 1 cut(s) 332
BstKTI GATC 2 cut(s) 306, 714
BstMBI GATC 2 cut(s) 303, 711
BstMCI CGRYCG 1 cut(s) 327
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstNI CCWGG 1 cut(s) 270
BstNSI RCATGY 2 cut(s) 148, 670
BstPAI GACNNNNGTC 1 cut(s) 323
BstSCI CCNGG 1 cut(s) 268
BstSFI CTRYAG 1 cut(s) 569
BstV1I GCAGC 1 cut(s) 555
BstV2I GAAGAC 3 cut(s) 11, 98, 615
BsuRI GGCC 5 cut(s) 16, 212, 273, 751, 874
BtrI CACGTC 1 cut(s) 343
BtsIMutI CAGTG 2 cut(s) 206, 945
Cac8I GCNNGC 1 cut(s) 485
CfoI GCGC 1 cut(s) 332
Cfr13I GGNCC 3 cut(s) 211, 749, 822
Csp6I GTAC 6 cut(s) 245, 616, 682, 829, 858, 973
CviAII CATG 9 cut(s) 145, 448, 636, 646, 667, 676, 812, 826, 863
CviQI GTAC 6 cut(s) 245, 616, 682, 829, 858, 973
DdeI CTNAG 5 cut(s) 156, 742, 798, 816, 840
DpnI GATC 2 cut(s) 305, 713
DpnII GATC 2 cut(s) 303, 711
EaeI YGGCCR 2 cut(s) 271, 872
Eam1104I CTCTTC 1 cut(s) 435
EarI CTCTTC 1 cut(s) 435
Eco130I CCWWGG 2 cut(s) 11, 369
Eco32I GATATC 1 cut(s) 727
Eco47I GGWCC 1 cut(s) 822
Eco57I CTGAAG 3 cut(s) 547, 611, 774
Eco88I CYCGRG 1 cut(s) 488
EcoNI CCTNNNNNAGG 2 cut(s) 368, 562
EcoO109I RGGNCCY 1 cut(s) 749
EcoRI GAATTC 1 cut(s) 255
EcoRII CCWGG 1 cut(s) 268
EcoRV GATATC 1 cut(s) 727
EcoT14I CCWWGG 2 cut(s) 11, 369
ErhI CCWWGG 2 cut(s) 11, 369
FaeI CATG 9 cut(s) 148, 451, 639, 649, 670, 679, 815, 829, 866
FalI AAGNNNNNCTT 4 cut(s) 372, 404, 725, 757
FaqI GGGAC 1 cut(s) 710
FatI CATG 9 cut(s) 144, 447, 635, 645, 666, 675, 811, 825, 862
Fnu4HI GCNGC 2 cut(s) 286, 569
Fsp4HI GCNGC 2 cut(s) 286, 569
FspBI CTAG 1 cut(s) 603
GlaI GCGC 1 cut(s) 331
GluI GCNGC 2 cut(s) 286, 569
HaeIII GGCC 5 cut(s) 16, 212, 273, 751, 874
HapII CCGG 1 cut(s) 323
HhaI GCGC 1 cut(s) 332
Hin1II CATG 9 cut(s) 148, 451, 639, 649, 670, 679, 815, 829, 866
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HinfI GANTC 4 cut(s) 96, 319, 584, 719
HpaII CCGG 1 cut(s) 323
HphI GGTGA 3 cut(s) 183, 358, 782
Hpy166II GTNNAC 3 cut(s) 340, 583, 860
Hpy188I TCNGA 7 cut(s) 88, 111, 242, 254, 591, 716, 724
Hpy188III TCNNGA 2 cut(s) 431, 839
Hpy8I GTNNAC 3 cut(s) 340, 583, 860
HpyAV CCTTC 4 cut(s) 51, 305, 740, 972
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4IV ACGT 2 cut(s) 28, 342
HpyCH4V TGCA 3 cut(s) 360, 571, 887
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
HpyF3I CTNAG 5 cut(s) 156, 742, 798, 816, 840
HpySE526I ACGT 2 cut(s) 28, 342
Hsp92II CATG 9 cut(s) 148, 451, 639, 649, 670, 679, 815, 829, 866
HspAI GCGC 1 cut(s) 330
Kzo9I GATC 2 cut(s) 303, 711
LmnI GCTCC 2 cut(s) 43, 649
Lsp1109I GCAGC 1 cut(s) 555
LweI GCATC 1 cut(s) 544
MaeI CTAG 1 cut(s) 603
MaeII ACGT 2 cut(s) 28, 342
MaeIII GTNAC 3 cut(s) 659, 770, 943
MalI GATC 2 cut(s) 305, 713
MboI GATC 2 cut(s) 303, 711
MboII GAAGA 9 cut(s) 16, 43, 98, 213, 386, 452, 620, 767, 913
MfeI CAATTG 1 cut(s) 882
MhlI GDGCHC 1 cut(s) 130
MlsI TGGCCA 2 cut(s) 273, 874
MluCI AATT 7 cut(s) 113, 166, 217, 255, 832, 882, 968
MluNI TGGCCA 2 cut(s) 273, 874
MlyI GAGTC 2 cut(s) 313, 578
MnlI CCTC 4 cut(s) 74, 160, 235, 374
Mox20I TGGCCA 2 cut(s) 273, 874
MroXI GAANNNNTTC 1 cut(s) 806
MscI TGGCCA 2 cut(s) 273, 874
MseI TTAA 2 cut(s) 216, 939
MslI CAYNNNNRTG 1 cut(s) 143
Msp20I TGGCCA 2 cut(s) 273, 874
MspI CCGG 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 270
MunI CAATTG 1 cut(s) 882
Mva1269I GAATGC 1 cut(s) 184
MvaI CCWGG 1 cut(s) 270
MwoI GCNNNNNNNGC 1 cut(s) 22
NdeII GATC 2 cut(s) 303, 711
NlaIII CATG 9 cut(s) 148, 451, 639, 649, 670, 679, 815, 829, 866
NlaIV GGNNCC 2 cut(s) 651, 809
NmuCI GTSAC 3 cut(s) 659, 770, 943
NspI RCATGY 2 cut(s) 148, 670
PciI ACATGT 1 cut(s) 666
PctI GAATGC 1 cut(s) 184
PdmI GAANNNNTTC 1 cut(s) 806
PfeI GAWTC 2 cut(s) 96, 719
PkrI GCNGC 2 cut(s) 287, 570
PleI GAGTC 2 cut(s) 313, 578
PpsI GAGTC 2 cut(s) 313, 578
PscI ACATGT 1 cut(s) 666
PshAI GACNNNNGTC 1 cut(s) 323
Psp6I CCWGG 1 cut(s) 268
PspGI CCWGG 1 cut(s) 268
PspN4I GGNNCC 2 cut(s) 651, 809
PspPI GGNCC 3 cut(s) 211, 749, 822
PstI CTGCAG 1 cut(s) 573
RsaI GTAC 6 cut(s) 246, 617, 683, 830, 859, 974
RsaNI GTAC 6 cut(s) 245, 616, 682, 829, 858, 973
RseI CAYNNNNRTG 1 cut(s) 143
SaqAI TTAA 2 cut(s) 216, 939
SatI GCNGC 2 cut(s) 286, 569
Sau3AI GATC 2 cut(s) 303, 711
Sau96I GGNCC 3 cut(s) 211, 749, 822
ScaI AGTACT 1 cut(s) 246
SchI GAGTC 2 cut(s) 313, 578
ScrFI CCNGG 1 cut(s) 270
SduI GDGCHC 1 cut(s) 130
SetI ASST 9 cut(s) 31, 345, 366, 473, 485, 526, 547, 809, 870
SfaNI GCATC 1 cut(s) 544
SfcI CTRYAG 1 cut(s) 569
SinI GGWCC 1 cut(s) 822
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 956
SmoI CTYRAG 1 cut(s) 956
Sse9I AATT 7 cut(s) 113, 166, 217, 255, 832, 882, 968
SsiI CCGC 1 cut(s) 286
SspMI CTAG 1 cut(s) 603
StyD4I CCNGG 1 cut(s) 268
StyI CCWWGG 2 cut(s) 11, 369
TaaI ACNGT 1 cut(s) 104
TaiI ACGT 2 cut(s) 31, 345
TaqI TCGA 3 cut(s) 99, 432, 479
TasI AATT 7 cut(s) 113, 166, 217, 255, 832, 882, 968
TatI WGTACW 4 cut(s) 244, 615, 828, 857
TauI GCSGC 1 cut(s) 288
TfiI GAWTC 2 cut(s) 96, 719
Tru1I TTAA 2 cut(s) 216, 939
Tru9I TTAA 2 cut(s) 216, 939
TscAI CASTG 2 cut(s) 213, 952
TseFI GTSAC 3 cut(s) 659, 770, 943
TseI GCWGC 1 cut(s) 568
Tsp45I GTSAC 3 cut(s) 659, 770, 943
TspDTI ATGAA 8 cut(s) 17, 43, 159, 177, 249, 464, 554, 881
TspRI CASTG 2 cut(s) 213, 952
VpaK11BI GGWCC 1 cut(s) 822
XagI CCTNNNNNAGG 2 cut(s) 368, 562
XapI RAATTY 2 cut(s) 113, 255
XceI RCATGY 2 cut(s) 148, 670
XmnI GAANNNNTTC 1 cut(s) 806
XspI CTAG 1 cut(s) 603
ZrmI AGTACT 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.