Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002784

Physical Location & Seq

Genomic Coordinates Reverse (-)

7441278 .. 7448446

Gene Structure 7169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G095000.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGCTACAGCACAGAATCAAAATGGTTAACAGCCACCATAACCTTTGCGCTCGCAGCTCTCTCCGCCTCCACTGCCTTTTCTTGTATGTATACAAATTTTGTTTTCTCCTTTTGTGTTGCATTGGGTCCTTGTAGTTTATTGTTCTTTTGGTCTGTAACAGTGTATTTTTGGAAAAGAAAATCGAGGGATTTGGATTCCAAGATTGGAGAGCTCGAGAAATCTCTCAAGACCTCCTTAGACAATTGTGCTGCTGAAAGGCAAGGCCGAATTCGGGCTCAGCAGGCTTTGAGGAAAGCACTAACGCAACCAAAGTTGGATAATGTGGAGCTGAATTCTTACCCCATGGCACCTATTGGTGTCATACAGTCATGCTTCTCTACCAGGAATGGGACTCCCAGGCAACCTGTACTTGTGCCTCTCTCGAGGGCCTGTTTGATCTTTAATACAGCTCGTGTTCCTCCAGCATCACTTGAGGGTCTTGGAGAATATTCTCACTGCTGGGTTATATATGTTTTCCATCAAAATACAAATCTAGAGAAGCTTTGGAAAGATCCAACTAAGTCAAAGTTCAAGGCCAAGGTAAGAGTGCCAACACTAAACGGTGAAAGGAAGGGACTCTTTGCAACAAGATCTCCACACAGGCCATCCCCCATTGGACTCAGTGTTGCCAAGGTGGAGGCTGTACAAGGGCATATGCTTCTACTCTCTGGTGTGGATTTGGTTGATGGGACACCTGTACTCGATGTCAAACCTTATATTCCCTACTGCGACAGCATCCAAGGAGCAAGAGTGCCAAAGTGGTTAGCGGCGGACAGTATATTAGCAGTAGCTTCTGTTAGTTTCTCTGAGGTGTTCACTTCCACACTTGCTGATTGCTGGGAAATGGCAGGAAATAATTCACTCTATGCTTCACCAGACGAGTTCAAAAACTTGATAAAGCAGGTGCTTTCATGGGATATTAGATCATTGGCTCAACGAAATCGACCTCATGATTCCTTCATTAACTCAGAAAATGGTAAACAGTTGAATGATAGTTCAGACAATGACCACGATGAAGAAGCTTCGAGCCCTGGAAATGAGCAGCCCCCAAGTTCTTCTGGGGACATAATGTATCACCTAACCCTAGAAGGATTGGAAGTTTCGTACAGACTCAATTCTGACTTCAGTGTGGTTGTAGAGAAAGTAAAAGAAGTATCAAACATCACACACAGTCGTCAAAAGCGATGTAATTACTCTATGTGGAGGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UPF0066

Protein Analysis

418

Amino Acids

46.5

Weight (kDa)

8.58

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28020 AT4G28020 AT4G28020 AT4G28020
fragaria_vesca	FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360 FvH4_4g08360
malus_domestica	MD13G1262500.v1.1
prunus_persica	Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1 Prupe.1G095000_v2.0.a1
pyrus_communis	pycom13g24450
rosa_chinensis	RchiOBHm_Chr4g0404161
rosa_laevigata	RLG00000008924
rosa_multiflora	Rmu_sc0001785.1_g000031 Rmu_sc0030861.1_g000001
rosa_roxburghii	Rroxscaffold_5G00348650
rosa_rugosa	Rorug04G0047100
rosa_samantha	Rh4AG123400 Rh4BG116000 Rh4CG131300 Rh4DG116000
rosa_wichuraiana	Rw4G009990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	934
Acc36I	ACCTGC	1 cut(s)	934
AccB1I	GGYRCC	1 cut(s)	349
AccI	GTMKAC	1 cut(s)	92
AciI	CCGC	3 cut(s)	66, 809, 812
AclWI	GGATC	1 cut(s)	548
AcsI	RAATTY	3 cut(s)	97, 270, 334
AcuI	CTGAAG	1 cut(s)	1150
AfaI	GTAC	4 cut(s)	411, 687, 741, 1148
AfiI	CCNNNNNNNGG	2 cut(s)	274, 390
AgsI	TTSAA	3 cut(s)	574, 928, 1030
AjnI	CCWGG	3 cut(s)	383, 398, 1072
AluBI	AGCT	7 cut(s)	59, 214, 331, 452, 544, 833, 1064
AluI	AGCT	7 cut(s)	59, 214, 331, 452, 544, 833, 1064
Alw21I	GWGCWC	1 cut(s)	216
AlwI	GGATC	1 cut(s)	548
Ama87I	CYCGRG	2 cut(s)	215, 424
AoxI	GGCC	4 cut(s)	265, 429, 576, 644
ApeKI	GCWGC	3 cut(s)	56, 251, 1084
ApoI	RAATTY	3 cut(s)	97, 270, 334
Asp700I	GAANNNNTTC	1 cut(s)	898
AspLEI	GCGC	1 cut(s)	52
AspS9I	GGNCC	2 cut(s)	128, 429
AsuHPI	GGTGA	3 cut(s)	617, 906, 1109
AvaI	CYCGRG	2 cut(s)	215, 424
AvaII	GGWCC	1 cut(s)	128
BanI	GGYRCC	1 cut(s)	349
BanII	GRGCYC	3 cut(s)	216, 280, 1073
BauI	CACGAG	1 cut(s)	453
Bbv12I	GWGCWC	1 cut(s)	216
BbvI	GCAGC	3 cut(s)	68, 238, 1096
BccI	CCATC	3 cut(s)	528, 655, 722
BciT130I	CCWGG	3 cut(s)	385, 400, 1074
BfaI	CTAG	2 cut(s)	536, 1127
BfmI	CTRYAG	1 cut(s)	7
BfuAI	ACCTGC	1 cut(s)	934
BglII	AGATCT	1 cut(s)	632
BisI	GCNGC	4 cut(s)	57, 252, 810, 1085
BlpI	GCTNAGC	1 cut(s)	279
BlsI	GCNGC	4 cut(s)	58, 253, 811, 1086
Bme1390I	CCNGG	3 cut(s)	385, 400, 1074
Bme18I	GGWCC	1 cut(s)	128
BmeT110I	CYCGRG	2 cut(s)	215, 424
BmgT120I	GGNCC	2 cut(s)	128, 429
BmiI	GGNNCC	2 cut(s)	129, 351
BmrFI	CCNGG	3 cut(s)	385, 400, 1074
BmsI	GCATC	2 cut(s)	476, 786
BpmI	CTGGAG	1 cut(s)	447
Bpu1102I	GCTNAGC	1 cut(s)	279
BpuEI	CTTGAG	2 cut(s)	212, 494
BsaJI	CCNNGG	6 cut(s)	345, 398, 579, 672, 781, 1072
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 777, 807
Bsc4I	CCNNNNNNNGG	2 cut(s)	274, 390
BseBI	CCWGG	3 cut(s)	385, 400, 1074
BseDI	CCNNGG	6 cut(s)	345, 398, 579, 672, 781, 1072
BseGI	GGATG	2 cut(s)	647, 777
BseLI	CCNNNNNNNGG	2 cut(s)	274, 390
BseMII	CTCAG	4 cut(s)	293, 676, 840, 1023
BseXI	GCAGC	3 cut(s)	68, 238, 1096
BseYI	CCCAGC	2 cut(s)	501, 879
BshFI	GGCC	4 cut(s)	267, 431, 578, 646
BshNI	GGYRCC	1 cut(s)	349
BsiHKAI	GWGCWC	1 cut(s)	216
BsiHKCI	CYCGRG	2 cut(s)	215, 424
BslFI	GGGAC	4 cut(s)	406, 630, 745, 1118
BslI	CCNNNNNNNGG	2 cut(s)	274, 390
BsmFI	GGGAC	4 cut(s)	406, 630, 745, 1118
BsnI	GGCC	4 cut(s)	267, 431, 578, 646
BsoBI	CYCGRG	2 cut(s)	215, 424
Bsp1286I	GDGCHC	3 cut(s)	216, 280, 1073
Bsp1407I	TGTACA	1 cut(s)	685
Bsp143I	GATC	4 cut(s)	438, 553, 632, 965
Bsp1720I	GCTNAGC	1 cut(s)	279
Bsp19I	CCATGG	1 cut(s)	345
BspACI	CCGC	3 cut(s)	66, 809, 812
BspANI	GGCC	4 cut(s)	267, 431, 578, 646
BspCNI	CTCAG	4 cut(s)	292, 675, 841, 1022
BspHI	TCATGA	1 cut(s)	991
BspLI	GGNNCC	2 cut(s)	129, 351
BspMI	ACCTGC	1 cut(s)	934
BspPI	GGATC	1 cut(s)	548
BspT107I	GGYRCC	1 cut(s)	349
BsrGI	TGTACA	1 cut(s)	685
BssECI	CCNNGG	6 cut(s)	345, 398, 579, 672, 781, 1072
BssMI	GATC	4 cut(s)	438, 553, 632, 965
BssNAI	GTATAC	1 cut(s)	93
BssSI	CACGAG	1 cut(s)	453
BssT1I	CCWWGG	4 cut(s)	345, 579, 672, 781
Bst1107I	GTATAC	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	453
Bst2UI	CCWGG	3 cut(s)	385, 400, 1074
Bst4CI	ACNGT	6 cut(s)	163, 369, 605, 818, 1026, 1214
BstAUI	TGTACA	1 cut(s)	685
BstC8I	GCNNGC	2 cut(s)	54, 285
BstDEI	CTNAG	6 cut(s)	238, 279, 561, 662, 849, 1009
BstDSI	CCRYGG	1 cut(s)	345
BstF5I	GGATG	2 cut(s)	647, 777
BstHHI	GCGC	1 cut(s)	52
BstKTI	GATC	4 cut(s)	441, 556, 635, 968
BstMBI	GATC	4 cut(s)	438, 553, 632, 965
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 65, 74, 284
BstNI	CCWGG	3 cut(s)	385, 400, 1074
BstSCI	CCNGG	3 cut(s)	383, 398, 1072
BstSFI	CTRYAG	1 cut(s)	7
BstV1I	GCAGC	3 cut(s)	68, 238, 1096
BstX2I	RGATCY	2 cut(s)	553, 632
BstYI	RGATCY	2 cut(s)	553, 632
BstZ17I	GTATAC	1 cut(s)	93
BsuRI	GGCC	4 cut(s)	267, 431, 578, 646
BtgI	CCRYGG	1 cut(s)	345
BtgZI	GCGATG	1 cut(s)	1240
BtsCI	GGATG	2 cut(s)	647, 777
BtsI	GCAGTG	2 cut(s)	72, 496
BtsIMutI	CAGTG	5 cut(s)	72, 168, 496, 670, 1174
BveI	ACCTGC	1 cut(s)	934
Cac8I	GCNNGC	2 cut(s)	54, 285
CciI	TCATGA	1 cut(s)	991
CfoI	GCGC	1 cut(s)	52
Cfr13I	GGNCC	2 cut(s)	128, 429
Csp6I	GTAC	4 cut(s)	410, 686, 740, 1147
CviAII	CATG	4 cut(s)	346, 372, 954, 992
CviQI	GTAC	4 cut(s)	410, 686, 740, 1147
DdeI	CTNAG	6 cut(s)	238, 279, 561, 662, 849, 1009
DpnI	GATC	4 cut(s)	440, 555, 634, 967
DpnII	GATC	4 cut(s)	438, 553, 632, 965
EciI	GGCGGA	2 cut(s)	55, 827
Ecl136II	GAGCTC	1 cut(s)	214
Eco130I	CCWWGG	4 cut(s)	345, 579, 672, 781
Eco24I	GRGCYC	3 cut(s)	216, 280, 1073
Eco47I	GGWCC	1 cut(s)	128
Eco53kI	GAGCTC	1 cut(s)	214
Eco57I	CTGAAG	1 cut(s)	1150
Eco88I	CYCGRG	2 cut(s)	215, 424
EcoICRI	GAGCTC	1 cut(s)	214
EcoO109I	RGGNCCY	2 cut(s)	128, 429
EcoRI	GAATTC	2 cut(s)	270, 334
EcoRII	CCWGG	3 cut(s)	383, 398, 1072
EcoT14I	CCWWGG	4 cut(s)	345, 579, 672, 781
EcoT38I	GRGCYC	3 cut(s)	216, 280, 1073
ErhI	CCWWGG	4 cut(s)	345, 579, 672, 781
FaeI	CATG	4 cut(s)	349, 375, 957, 995
FalI	AAGNNNNNCTT	4 cut(s)	221, 253, 605, 637
FaqI	GGGAC	4 cut(s)	406, 630, 745, 1118
FatI	CATG	4 cut(s)	345, 371, 953, 991
FauNDI	CATATG	1 cut(s)	696
FblI	GTMKAC	1 cut(s)	92
Fnu4HI	GCNGC	4 cut(s)	57, 252, 810, 1085
FokI	GGATG	2 cut(s)	634, 764
FriOI	GRGCYC	3 cut(s)	216, 280, 1073
Fsp4HI	GCNGC	4 cut(s)	57, 252, 810, 1085
FspBI	CTAG	2 cut(s)	536, 1127
GlaI	GCGC	1 cut(s)	51
GluI	GCNGC	4 cut(s)	57, 252, 810, 1085
GsaI	CCCAGC	2 cut(s)	505, 883
GsuI	CTGGAG	1 cut(s)	447
HaeIII	GGCC	4 cut(s)	267, 431, 578, 646
HhaI	GCGC	1 cut(s)	52
Hin1II	CATG	4 cut(s)	349, 375, 957, 995
Hin6I	GCGC	1 cut(s)	50
HinP1I	GCGC	1 cut(s)	50
HincII	GTYRAC	1 cut(s)	30
HindII	GTYRAC	1 cut(s)	30
HindIII	AAGCTT	2 cut(s)	542, 1062
HinfI	GANTC	7 cut(s)	17, 197, 394, 618, 660, 995, 1152
HpaI	GTTAAC	1 cut(s)	30
HphI	GGTGA	3 cut(s)	617, 906, 1109
Hpy166II	GTNNAC	4 cut(s)	30, 93, 858, 1022
Hpy188I	TCNGA	5 cut(s)	850, 1012, 1042, 1162, 1253
Hpy188III	TCNNGA	5 cut(s)	217, 229, 424, 536, 992
Hpy8I	GTNNAC	4 cut(s)	30, 93, 858, 1022
HpyAV	CCTTC	3 cut(s)	607, 1009, 1124
HpyCH4III	ACNGT	6 cut(s)	163, 369, 605, 818, 1026, 1214
HpyCH4V	TGCA	2 cut(s)	122, 626
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 65, 74, 284
HpyF3I	CTNAG	6 cut(s)	238, 279, 561, 662, 849, 1009
Hsp92II	CATG	4 cut(s)	349, 375, 957, 995
HspAI	GCGC	1 cut(s)	50
KspAI	GTTAAC	1 cut(s)	30
Kzo9I	GATC	4 cut(s)	438, 553, 632, 965
LmnI	GCTCC	2 cut(s)	328, 785
Lsp1109I	GCAGC	3 cut(s)	68, 238, 1096
LweI	GCATC	2 cut(s)	476, 786
MaeI	CTAG	2 cut(s)	536, 1127
MaeIII	GTNAC	1 cut(s)	157
MalI	GATC	4 cut(s)	440, 555, 634, 967
MboI	GATC	4 cut(s)	438, 553, 632, 965
MboII	GAAGA	2 cut(s)	1070, 1089
MfeI	CAATTG	1 cut(s)	244
MflI	RGATCY	2 cut(s)	553, 632
MhlI	GDGCHC	3 cut(s)	216, 280, 1073
MluCI	AATT	7 cut(s)	97, 244, 270, 334, 898, 1156, 1231
MlyI	GAGTC	4 cut(s)	388, 612, 654, 1146
MmeI	TCCRAC	2 cut(s)	297, 581
MroXI	GAANNNNTTC	1 cut(s)	898
MseI	TTAA	3 cut(s)	29, 444, 1005
MspR9I	CCNGG	3 cut(s)	385, 400, 1074
MunI	CAATTG	1 cut(s)	244
MvaI	CCWGG	3 cut(s)	385, 400, 1074
MwoI	GCNNNNNNNGC	4 cut(s)	56, 65, 74, 284
NcoI	CCATGG	1 cut(s)	345
NdeI	CATATG	1 cut(s)	696
NdeII	GATC	4 cut(s)	438, 553, 632, 965
NlaIII	CATG	4 cut(s)	349, 375, 957, 995
NlaIV	GGNNCC	2 cut(s)	129, 351
PaeR7I	CTCGAG	2 cut(s)	215, 424
PagI	TCATGA	1 cut(s)	991
PaqCI	CACCTGC	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	1 cut(s)	1222
PdmI	GAANNNNTTC	1 cut(s)	898
PfeI	GAWTC	3 cut(s)	17, 197, 995
PkrI	GCNGC	4 cut(s)	58, 253, 811, 1086
PleI	GAGTC	4 cut(s)	388, 612, 654, 1146
PpsI	GAGTC	4 cut(s)	388, 612, 654, 1146
PpuMI	RGGWCCY	1 cut(s)	128
Psp124BI	GAGCTC	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	128
Psp6I	CCWGG	3 cut(s)	383, 398, 1072
PspFI	CCCAGC	2 cut(s)	501, 879
PspGI	CCWGG	3 cut(s)	383, 398, 1072
PspN4I	GGNNCC	2 cut(s)	129, 351
PspPI	GGNCC	2 cut(s)	128, 429
PspPPI	RGGWCCY	1 cut(s)	128
PsuI	RGATCY	2 cut(s)	553, 632
RsaI	GTAC	4 cut(s)	411, 687, 741, 1148
RsaNI	GTAC	4 cut(s)	410, 686, 740, 1147
SacI	GAGCTC	1 cut(s)	216
SaqAI	TTAA	3 cut(s)	29, 444, 1005
SatI	GCNGC	4 cut(s)	57, 252, 810, 1085
Sau3AI	GATC	4 cut(s)	438, 553, 632, 965
Sau96I	GGNCC	2 cut(s)	128, 429
SchI	GAGTC	4 cut(s)	388, 612, 654, 1146
ScrFI	CCNGG	3 cut(s)	385, 400, 1074
SduI	GDGCHC	3 cut(s)	216, 280, 1073
SfaNI	GCATC	2 cut(s)	476, 786
SfcI	CTRYAG	1 cut(s)	7
Sfr274I	CTCGAG	2 cut(s)	215, 424
SinI	GGWCC	1 cut(s)	128
SlaI	CTCGAG	2 cut(s)	215, 424
SmlI	CTYRAG	4 cut(s)	215, 227, 424, 473
SmoI	CTYRAG	4 cut(s)	215, 227, 424, 473
Sse9I	AATT	7 cut(s)	97, 244, 270, 334, 898, 1156, 1231
SsiI	CCGC	3 cut(s)	66, 809, 812
SspI	AATATT	1 cut(s)	491
SspMI	CTAG	2 cut(s)	536, 1127
SstI	GAGCTC	1 cut(s)	216
StyD4I	CCNGG	3 cut(s)	383, 398, 1072
StyI	CCWWGG	4 cut(s)	345, 579, 672, 781
TaaI	ACNGT	6 cut(s)	163, 369, 605, 818, 1026, 1214
TaqI	TCGA	6 cut(s)	185, 216, 425, 744, 985, 1067
TasI	AATT	7 cut(s)	97, 244, 270, 334, 898, 1156, 1231
TatI	WGTACW	3 cut(s)	409, 685, 739
TauI	GCSGC	1 cut(s)	812
TfiI	GAWTC	3 cut(s)	17, 197, 995
Tru1I	TTAA	3 cut(s)	29, 444, 1005
Tru9I	TTAA	3 cut(s)	29, 444, 1005
TscAI	CASTG	5 cut(s)	79, 168, 503, 670, 1174
TseI	GCWGC	3 cut(s)	56, 251, 1084
TspDTI	ATGAA	3 cut(s)	942, 991, 1071
TspRI	CASTG	5 cut(s)	79, 168, 503, 670, 1174
VpaK11BI	GGWCC	1 cut(s)	128
XapI	RAATTY	3 cut(s)	97, 270, 334
XbaI	TCTAGA	1 cut(s)	535
XhoI	CTCGAG	2 cut(s)	215, 424
XmiI	GTMKAC	1 cut(s)	92
XmnI	GAANNNNTTC	1 cut(s)	898
XspI	CTAG	2 cut(s)	536, 1127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.