Prupe.1G095600_v2.0.a1

tRNA (adenine-N6-)-methyltransferase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
7563603 .. 7567189
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G095600.1

Sequence Viewer

Length: 447 bp
ATGTCGTCCACATCTCTGCTACCTATCAATGGAGGCCACCTTCTCTTCACTCAAGGCTCATCCTTTCCCAATTACCATCCTTCTGCAACTCTCTACAAGTGGGGATGGAAAAGACAACAAGGTGGAAATGTAGTTGCTTACAGAGCCAATGGCCATGCTCTTCAAATTTTGGCCAATCCTAATGTCTCTTCAAGGAAAAGAGACTCAAGTAATGAAGTGATCATGGTTGATCCTTTGGAAGCCAAGCGGTTGGCTGCCAAGCAAATGGAAGAAATCAAAGCAAAAGAGAAGTACAAGAGAAAACGTCAAATAGAAGCAATTAATGGTGCATGGGCAATGATTGGTCTTACAGCGGGCTTGGTTATTGAAGCTCAAACTGGAAAAGGCATTCTGGACCAGTTGGTTGGCTACTGGAATGCAATTGTCAACATCTTCATGCCACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

149

Amino Acids

16.41

Weight (kDa)

9.89

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014478)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28025 AT4G28025
fragaria_vesca FvH4_4g08570 FvH4_4g08570
malus_domestica MD16G1263600.v1.1
prunus_persica Prupe.1G095600_v2.0.a1
pyrus_communis pycom16g23250
rosa_chinensis RchiOBHm_Chr4g0404651
rosa_laevigata RLG00000008916
rosa_multiflora Rmu_sc0002699.1_g000039
rosa_roxburghii Rroxscaffold_5G00348800
rosa_rugosa Rorug04G0048500
rosa_samantha Rh4AG124200 Rh4BG118300 Rh4CG132300 Rh4DG117300
rosa_wichuraiana Rw4G010070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 247, 353
AclWI GGATC 1 cut(s) 224
AcoI YGGCCR 2 cut(s) 151, 171
AcsI RAATTY 1 cut(s) 165
AfaI GTAC 1 cut(s) 293
AfiI CCNNNNNNNGG 1 cut(s) 29
AgsI TTSAA 3 cut(s) 164, 192, 368
AluBI AGCT 1 cut(s) 371
AluI AGCT 1 cut(s) 371
Alw26I GTCTC 2 cut(s) 190, 195
AlwI GGATC 1 cut(s) 224
AoxI GGCC 3 cut(s) 34, 151, 171
ApeKI GCWGC 1 cut(s) 254
ApoI RAATTY 1 cut(s) 165
AseI ATTAAT 1 cut(s) 321
AspS9I GGNCC 1 cut(s) 394
AvaII GGWCC 1 cut(s) 394
BalI TGGCCA 2 cut(s) 153, 173
BbvI GCAGC 1 cut(s) 241
BccI CCATC 2 cut(s) 84, 99
BclI TGATCA 1 cut(s) 219
BcoDI GTCTC 2 cut(s) 190, 195
BisI GCNGC 1 cut(s) 255
BlsI GCNGC 1 cut(s) 256
Bme18I GGWCC 1 cut(s) 394
BmgT120I GGNCC 1 cut(s) 394
BpuEI CTTGAG 2 cut(s) 36, 190
Bsc4I CCNNNNNNNGG 1 cut(s) 29
Bse1I ACTGG 3 cut(s) 382, 397, 416
Bse3DI GCAATG 1 cut(s) 342
BseGI GGATG 3 cut(s) 59, 76, 110
BseLI CCNNNNNNNGG 1 cut(s) 29
BseMI GCAATG 1 cut(s) 342
BseNI ACTGG 3 cut(s) 382, 397, 416
BseXI GCAGC 1 cut(s) 241
BshFI GGCC 3 cut(s) 36, 153, 173
BslI CCNNNNNNNGG 1 cut(s) 29
BsmAI GTCTC 2 cut(s) 190, 195
BsmI GAATGC 2 cut(s) 387, 421
BsnI GGCC 3 cut(s) 36, 153, 173
Bsp143I GATC 2 cut(s) 219, 229
BspACI CCGC 2 cut(s) 247, 353
BspANI GGCC 3 cut(s) 36, 153, 173
BspPI GGATC 1 cut(s) 224
BspQI GCTCTTC 1 cut(s) 165
BsrDI GCAATG 1 cut(s) 342
BsrI ACTGG 3 cut(s) 382, 397, 416
BssMI GATC 2 cut(s) 219, 229
Bst4CI ACNGT 1 cut(s) 444
Bst6I CTCTTC 3 cut(s) 50, 165, 193
BstC8I GCNNGC 1 cut(s) 355
BstF5I GGATG 3 cut(s) 59, 76, 110
BstKTI GATC 2 cut(s) 222, 232
BstMAI GTCTC 2 cut(s) 190, 195
BstMBI GATC 2 cut(s) 219, 229
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstV1I GCAGC 1 cut(s) 241
BstXI CCANNNNNNTGG 3 cut(s) 250, 265, 404
BsuRI GGCC 3 cut(s) 36, 153, 173
BtsCI GGATG 3 cut(s) 59, 76, 110
Cac8I GCNNGC 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 394
Csp6I GTAC 1 cut(s) 292
CviAII CATG 4 cut(s) 155, 223, 330, 436
CviQI GTAC 1 cut(s) 292
DpnI GATC 2 cut(s) 221, 231
DpnII GATC 2 cut(s) 219, 229
EaeI YGGCCR 2 cut(s) 151, 171
Eam1104I CTCTTC 3 cut(s) 50, 165, 193
EarI CTCTTC 3 cut(s) 50, 165, 193
Eco47I GGWCC 1 cut(s) 394
FaeI CATG 4 cut(s) 158, 226, 333, 439
FaiI YATR 4 cut(s) 156, 224, 331, 437
FatI CATG 4 cut(s) 154, 222, 329, 435
FauI CCCGC 1 cut(s) 346
FbaI TGATCA 1 cut(s) 219
Fnu4HI GCNGC 1 cut(s) 255
FokI GGATG 3 cut(s) 46, 63, 117
Fsp4HI GCNGC 1 cut(s) 255
GluI GCNGC 1 cut(s) 255
HaeIII GGCC 3 cut(s) 36, 153, 173
Hin1II CATG 4 cut(s) 158, 226, 333, 439
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HinfI GANTC 1 cut(s) 203
Hpy166II GTNNAC 2 cut(s) 9, 427
Hpy188III TCNNGA 1 cut(s) 392
Hpy8I GTNNAC 2 cut(s) 9, 427
HpyAV CCTTC 2 cut(s) 50, 90
HpyCH4III ACNGT 1 cut(s) 444
HpyCH4IV ACGT 1 cut(s) 304
HpyCH4V TGCA 3 cut(s) 86, 329, 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpySE526I ACGT 1 cut(s) 304
Hsp92II CATG 4 cut(s) 158, 226, 333, 439
Ksp22I TGATCA 1 cut(s) 219
Kzo9I GATC 2 cut(s) 219, 229
LguI GCTCTTC 1 cut(s) 165
LpnPI CCDG 4 cut(s) 363, 377, 397, 410
Lsp1109I GCAGC 1 cut(s) 241
MaeII ACGT 1 cut(s) 304
MalI GATC 2 cut(s) 221, 231
MboI GATC 2 cut(s) 219, 229
MboII GAAGA 5 cut(s) 37, 152, 180, 281, 424
MfeI CAATTG 1 cut(s) 420
MlsI TGGCCA 2 cut(s) 153, 173
MluCI AATT 4 cut(s) 70, 165, 318, 420
MluNI TGGCCA 2 cut(s) 153, 173
MlyI GAGTC 1 cut(s) 197
MnlI CCTC 1 cut(s) 26
Mox20I TGGCCA 2 cut(s) 153, 173
MscI TGGCCA 2 cut(s) 153, 173
MseI TTAA 1 cut(s) 321
MslI CAYNNNNRTG 1 cut(s) 434
Msp20I TGGCCA 2 cut(s) 153, 173
MspA1I CMGCKG 1 cut(s) 353
MunI CAATTG 1 cut(s) 420
Mva1269I GAATGC 2 cut(s) 387, 421
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeII GATC 2 cut(s) 219, 229
NlaIII CATG 4 cut(s) 158, 226, 333, 439
PciSI GCTCTTC 1 cut(s) 165
PctI GAATGC 2 cut(s) 387, 421
PkrI GCNGC 1 cut(s) 256
PleI GAGTC 1 cut(s) 197
PpsI GAGTC 1 cut(s) 197
PshBI ATTAAT 1 cut(s) 321
PspPI GGNCC 1 cut(s) 394
RsaI GTAC 1 cut(s) 293
RsaNI GTAC 1 cut(s) 292
RseI CAYNNNNRTG 1 cut(s) 434
SapI GCTCTTC 1 cut(s) 165
SaqAI TTAA 1 cut(s) 321
SatI GCNGC 1 cut(s) 255
Sau3AI GATC 2 cut(s) 219, 229
Sau96I GGNCC 1 cut(s) 394
SchI GAGTC 1 cut(s) 197
SetI ASST 5 cut(s) 25, 42, 124, 307, 373
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 434
SmlI CTYRAG 2 cut(s) 51, 205
SmoI CTYRAG 2 cut(s) 51, 205
Sse9I AATT 4 cut(s) 70, 165, 318, 420
SsiI CCGC 2 cut(s) 247, 353
TaaI ACNGT 1 cut(s) 444
TaiI ACGT 1 cut(s) 307
TasI AATT 4 cut(s) 70, 165, 318, 420
TatI WGTACW 1 cut(s) 291
Tru1I TTAA 1 cut(s) 321
Tru9I TTAA 1 cut(s) 321
TseI GCWGC 1 cut(s) 254
TspDTI ATGAA 2 cut(s) 228, 424
VpaK11BI GGWCC 1 cut(s) 394
VspI ATTAAT 1 cut(s) 321
XapI RAATTY 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.