Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007350

Physical Location & Seq

Genomic Coordinates Reverse (-)

8010828 .. 8016251

Gene Structure 5424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G100700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

ATGGCCAATCAGTCCTCCTCTTCTTACCCAATCCTTTGCGCTTCCTTCAATCAAGACACCAGTTGCTTTGCAATTGGGACAAAGGATGGCTTCAAAATATTCGATTCCAATACAGGGAGGCTCTGTTACGAACGAGCTATTGGAGCTTTCGTTATTGTTGAAATGCTATTTAGCTCCAGTCTTCTTGCCATTGTTGGAGCTGGTGAGGAGCCATCTTTATCGCCACGGCGTCTCTGTTTGTTCAACACCACAACTGGAACTGCTCTTCGAGAATTAAATTTTTTGACTTCAATACTTGCTGTTCGCATGAATAAGAAAAGACTTGTTGTCATTTTACAGGACAAAACATATGTATATGACATAAATAGTCTTGGAATCTTGGACACTATTGATACTATACCAAATTTTAAAGGGCTTTGTGCATTCTCTCCAAGTTTGGAAGGGTGCTTCTTGGCTCTTCCTGCTAGCATCTCCAAGGGATCTGTGTTGTTGTACAATGTCATGGACCTGCATTTACATTGTGAGATAGATGCTCATCGAGCCCCACTTGCTGCAATGGCTCTTTCTTCCAATGGGACGTACATAGCAACAGCATCTGAACAGGGGACCATTATAAGAGTCCATCTAGTCTCAGAAGCAACTAAGTCTTATAGCTTTCGAAGAGGGACATATCCGTCAACTATATTTTCTTTGTCATTTGGGCCATCTACGCAACTGCCAGATATTCTTGTGGGCACAAGTTCTTCAGGTTCTGTTCATGCTTTCTCTCTGGGGTTCTCTATTTATCAAAGCAGAAGCAAAAGATCAGGAAGTTTTCTTGGATCAATTATACCTGGCTCTGTTACGGATGCATTGGATCCAGCCCATCATGATGTACTTCATAATGCTGCACCAGCAGGAGTCAAAAGCTATGCCGTGATTCGAAAGGTTGACAAGGTTGCTGATACATCAACTTCAGAAATTGTGGCTTGCAGGGCAACTATTTCCATTATAACATACAATGGGTACTTCCAGGAGTACAATTTAAGCATCAACAATCAGAACGAGTTCTCATGGAGTTTGGAGCGTGAATTCAAGCTACTGACTGTCATCTCAGACGATGCCATCAGCTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 map04136 map04138 map04140

Pfam Domains

Protein Families

No domains found.

Protein Analysis

372

Amino Acids

40.15

Weight (kDa)

6.45

Isoelectric Point (pI)

35.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007350)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30510 AT4G30510
fragaria_vesca	FvH4_4g08740 FvH4_4g08740 FvH4_4g08740 FvH4_4g08740 FvH4_4g08740 FvH4_4g08740 FvH4_4g08740
malus_domestica	MD16G1259300.v1.1
prunus_persica	Prupe.1G100700_v2.0.a1 Prupe.1G100700_v2.0.a1 Prupe.1G100700_v2.0.a1
pyrus_communis	pycom16g22700
rosa_chinensis	RchiOBHm_Chr4g0405281
rosa_laevigata	RLG00000008860
rosa_multiflora	Rmu_sc0000161.1_g000002
rosa_roxburghii	Rroxscaffold_5G00349620
rosa_rugosa	Rorug04G0056300 Rorug04G0056400 Rorug04G0056500
rosa_samantha	Rh4AG130200 Rh4BG124600 Rh4DG123800
rosa_wichuraiana	Rw4G010550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	614, 992
AasI	GACNNNNNNGTC	1 cut(s)	673
Acc36I	ACCTGC	1 cut(s)	516
AclWI	GGATC	4 cut(s)	487, 829, 851, 864
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	277, 403, 1070
AcuI	CTGAAG	2 cut(s)	729, 939
AcyI	GRCGYC	1 cut(s)	229
AfaI	GTAC	5 cut(s)	494, 581, 876, 1007, 1019
AfiI	CCNNNNNNNGG	1 cut(s)	114
AgsI	TTSAA	6 cut(s)	49, 94, 161, 244, 291, 1075
AhdI	GACNNNNNGTC	1 cut(s)	326
AjnI	CCWGG	2 cut(s)	832, 1011
AjuI	GAANNNNNNNTTGG	2 cut(s)	123, 155
AluBI	AGCT	8 cut(s)	137, 146, 174, 200, 654, 909, 1078, 1110
AluI	AGCT	8 cut(s)	137, 146, 174, 200, 654, 909, 1078, 1110
Alw26I	GTCTC	2 cut(s)	236, 634
AlwI	GGATC	4 cut(s)	487, 829, 851, 864
AlwNI	CAGNNNCTG	3 cut(s)	596, 752, 1113
AoxI	GGCC	2 cut(s)	3, 701
ApeKI	GCWGC	2 cut(s)	551, 887
ApoI	RAATTY	3 cut(s)	277, 403, 1070
Asp700I	GAANNNNTTC	1 cut(s)	1046
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	3 cut(s)	505, 606, 701
AsuHPI	GGTGA	1 cut(s)	215
AsuII	TTCGAA	2 cut(s)	658, 922
AsuNHI	GCTAGC	1 cut(s)	464
AvaII	GGWCC	2 cut(s)	505, 606
BaeGI	GKGCMC	1 cut(s)	737
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	856
BanII	GRGCYC	1 cut(s)	544
BbsI	GAAGAC	1 cut(s)	173
BbvI	GCAGC	2 cut(s)	538, 874
BccI	CCATC	6 cut(s)	80, 220, 630, 712, 873, 1112
BceAI	ACGGC	2 cut(s)	242, 899
BciT130I	CCWGG	2 cut(s)	834, 1013
BcoDI	GTCTC	2 cut(s)	236, 634
BfaI	CTAG	2 cut(s)	465, 626
BfuAI	ACCTGC	1 cut(s)	516
BisI	GCNGC	2 cut(s)	552, 888
BlsI	GCNGC	2 cut(s)	553, 889
Bme1390I	CCNGG	2 cut(s)	834, 1013
Bme18I	GGWCC	2 cut(s)	505, 606
BmeRI	GACNNNNNGTC	1 cut(s)	326
BmgT120I	GGNCC	3 cut(s)	505, 606, 701
BmiI	GGNNCC	3 cut(s)	210, 607, 858
BmrFI	CCNGG	2 cut(s)	834, 1013
BmsI	GCATC	6 cut(s)	477, 520, 602, 838, 1038, 1090
BmtI	GCTAGC	1 cut(s)	468
BpiI	GAAGAC	1 cut(s)	173
BpmI	CTGGAG	1 cut(s)	160
Bpu14I	TTCGAA	2 cut(s)	658, 922
BsaBI	GATNNNNATC	1 cut(s)	534
BsaHI	GRCGYC	1 cut(s)	229
BsaJI	CCNNGG	2 cut(s)	224, 474
BsaXI	ACNNNNNCTCC	4 cut(s)	109, 135, 139, 165
Bsc4I	CCNNNNNNNGG	1 cut(s)	114
Bse1I	ACTGG	3 cut(s)	60, 177, 259
Bse3DI	GCAATG	1 cut(s)	561
Bse8I	GATNNNNATC	1 cut(s)	534
BseBI	CCWGG	2 cut(s)	834, 1013
BseDI	CCNNGG	2 cut(s)	224, 474
BseGI	GGATG	2 cut(s)	91, 853
BseJI	GATNNNNATC	1 cut(s)	534
BseLI	CCNNNNNNNGG	1 cut(s)	114
BseMI	GCAATG	1 cut(s)	561
BseMII	CTCAG	2 cut(s)	645, 1107
BseNI	ACTGG	3 cut(s)	60, 177, 259
BseRI	GAGGAG	2 cut(s)	7, 221
BseSI	GKGCMC	1 cut(s)	737
BseXI	GCAGC	2 cut(s)	538, 874
BsgI	GTGCAG	1 cut(s)	873
BshFI	GGCC	2 cut(s)	5, 703
BslFI	GGGAC	4 cut(s)	91, 589, 619, 679
BslI	CCNNNNNNNGG	1 cut(s)	114
BsmAI	GTCTC	2 cut(s)	236, 634
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	4 cut(s)	91, 589, 619, 679
BsmI	GAATGC	1 cut(s)	422
BsnI	GGCC	2 cut(s)	5, 703
Bsp119I	TTCGAA	2 cut(s)	658, 922
Bsp1286I	GDGCHC	2 cut(s)	544, 737
Bsp1407I	TGTACA	1 cut(s)	492
Bsp143I	GATC	4 cut(s)	479, 803, 821, 856
BspANI	GGCC	2 cut(s)	5, 703
BspCNI	CTCAG	2 cut(s)	644, 1106
BspHI	TCATGA	1 cut(s)	868
BspLI	GGNNCC	3 cut(s)	210, 607, 858
BspMI	ACCTGC	1 cut(s)	516
BspOI	GCTAGC	1 cut(s)	468
BspPI	GGATC	4 cut(s)	487, 829, 851, 864
BspQI	GCTCTTC	2 cut(s)	270, 462
BspT104I	TTCGAA	2 cut(s)	658, 922
BsrDI	GCAATG	1 cut(s)	561
BsrGI	TGTACA	1 cut(s)	492
BsrI	ACTGG	3 cut(s)	60, 177, 259
BssECI	CCNNGG	2 cut(s)	224, 474
BssMI	GATC	4 cut(s)	479, 803, 821, 856
BssNI	GRCGYC	1 cut(s)	229
BssT1I	CCWWGG	1 cut(s)	474
Bst2UI	CCWGG	2 cut(s)	834, 1013
Bst4CI	ACNGT	1 cut(s)	1087
Bst6I	CTCTTC	4 cut(s)	25, 270, 462, 655
BstACI	GRCGYC	1 cut(s)	229
BstAUI	TGTACA	1 cut(s)	492
BstBI	TTCGAA	2 cut(s)	658, 922
BstC8I	GCNNGC	2 cut(s)	466, 970
BstDEI	CTNAG	3 cut(s)	631, 642, 1093
BstDSI	CCRYGG	1 cut(s)	224
BstF5I	GGATG	2 cut(s)	91, 853
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	4 cut(s)	482, 806, 824, 859
BstMAI	GTCTC	2 cut(s)	236, 634
BstMBI	GATC	4 cut(s)	479, 803, 821, 856
BstMWI	GCNNNNNNNGC	8 cut(s)	143, 461, 539, 548, 557, 709, 893, 974
BstNI	CCWGG	2 cut(s)	834, 1013
BstSCI	CCNGG	2 cut(s)	832, 1011
BstSLI	GKGCMC	1 cut(s)	737
BstV1I	GCAGC	2 cut(s)	538, 874
BstV2I	GAAGAC	1 cut(s)	173
BstX2I	RGATCY	2 cut(s)	479, 856
BstYI	RGATCY	2 cut(s)	479, 856
BsuRI	GGCC	2 cut(s)	5, 703
BtgI	CCRYGG	1 cut(s)	224
BtsCI	GGATG	2 cut(s)	91, 853
BveI	ACCTGC	1 cut(s)	516
Cac8I	GCNNGC	2 cut(s)	466, 970
CaiI	CAGNNNCTG	3 cut(s)	596, 752, 1113
CciI	TCATGA	1 cut(s)	868
CfoI	GCGC	1 cut(s)	41
Cfr13I	GGNCC	3 cut(s)	505, 606, 701
CseI	GACGC	1 cut(s)	218
Csp6I	GTAC	5 cut(s)	493, 580, 875, 1006, 1018
CviAII	CATG	5 cut(s)	307, 502, 758, 869, 1053
CviQI	GTAC	5 cut(s)	493, 580, 875, 1006, 1018
DdeI	CTNAG	3 cut(s)	631, 642, 1093
DpnI	GATC	4 cut(s)	481, 805, 823, 858
DpnII	GATC	4 cut(s)	479, 803, 821, 856
DraI	TTTAAA	1 cut(s)	409
DrdI	GACNNNNNNGTC	1 cut(s)	673
DriI	GACNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	673
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	25, 270, 462, 655
Eam1105I	GACNNNNNGTC	1 cut(s)	326
EarI	CTCTTC	4 cut(s)	25, 270, 462, 655
Eco130I	CCWWGG	1 cut(s)	474
Eco24I	GRGCYC	1 cut(s)	544
Eco47I	GGWCC	2 cut(s)	505, 606
Eco57I	CTGAAG	2 cut(s)	729, 939
EcoRI	GAATTC	1 cut(s)	1070
EcoRII	CCWGG	2 cut(s)	832, 1011
EcoT14I	CCWWGG	1 cut(s)	474
EcoT22I	ATGCAT	1 cut(s)	853
EcoT38I	GRGCYC	1 cut(s)	544
ErhI	CCWWGG	1 cut(s)	474
Esp3I	CGTCTC	1 cut(s)	236
FaeI	CATG	5 cut(s)	310, 505, 761, 872, 1056
FalI	AAGNNNNNCTT	2 cut(s)	74, 106
FaqI	GGGAC	4 cut(s)	91, 589, 619, 679
FatI	CATG	5 cut(s)	306, 501, 757, 868, 1052
FauNDI	CATATG	1 cut(s)	349
Fnu4HI	GCNGC	2 cut(s)	552, 888
FokI	GGATG	2 cut(s)	98, 860
FriOI	GRGCYC	1 cut(s)	544
Fsp4HI	GCNGC	2 cut(s)	552, 888
FspBI	CTAG	2 cut(s)	465, 626
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	2 cut(s)	552, 888
GsuI	CTGGAG	1 cut(s)	160
HaeIII	GGCC	2 cut(s)	5, 703
HgaI	GACGC	1 cut(s)	218
HhaI	GCGC	1 cut(s)	41
Hin1I	GRCGYC	1 cut(s)	229
Hin1II	CATG	5 cut(s)	310, 505, 761, 872, 1056
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HincII	GTYRAC	2 cut(s)	678, 931
HindII	GTYRAC	2 cut(s)	678, 931
HinfI	GANTC	5 cut(s)	104, 375, 618, 900, 919
HphI	GGTGA	1 cut(s)	215
Hpy166II	GTNNAC	2 cut(s)	678, 931
Hpy188I	TCNGA	5 cut(s)	598, 634, 958, 1041, 1096
Hpy188III	TCNNGA	5 cut(s)	53, 269, 807, 869, 1113
Hpy8I	GTNNAC	2 cut(s)	678, 931
HpyAV	CCTTC	2 cut(s)	55, 434
HpyCH4III	ACNGT	1 cut(s)	1087
HpyCH4IV	ACGT	1 cut(s)	578
HpyCH4V	TGCA	7 cut(s)	71, 422, 511, 554, 851, 890, 972
HpyF10VI	GCNNNNNNNGC	8 cut(s)	143, 461, 539, 548, 557, 709, 893, 974
HpyF3I	CTNAG	3 cut(s)	631, 642, 1093
HpySE526I	ACGT	1 cut(s)	578
Hsp92I	GRCGYC	1 cut(s)	229
Hsp92II	CATG	5 cut(s)	310, 505, 761, 872, 1056
HspAI	GCGC	1 cut(s)	39
Kzo9I	GATC	4 cut(s)	479, 803, 821, 856
LguI	GCTCTTC	2 cut(s)	270, 462
LmnI	GCTCC	6 cut(s)	143, 179, 197, 208, 1063, 1115
Lsp1109I	GCAGC	2 cut(s)	538, 874
LweI	GCATC	6 cut(s)	477, 520, 602, 838, 1038, 1090
MaeI	CTAG	2 cut(s)	465, 626
MaeII	ACGT	1 cut(s)	578
MaeIII	GTNAC	2 cut(s)	125, 841
MalI	GATC	4 cut(s)	481, 805, 823, 858
MboI	GATC	4 cut(s)	479, 803, 821, 856
MboII	GAAGA	7 cut(s)	12, 173, 257, 449, 558, 672, 735
MfeI	CAATTG	1 cut(s)	72
MflI	RGATCY	2 cut(s)	479, 856
MhlI	GDGCHC	2 cut(s)	544, 737
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	72, 272, 277, 403, 825, 960, 1021, 1070
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	627, 909
MmeI	TCCRAC	1 cut(s)	175
MnlI	CCTC	5 cut(s)	25, 28, 111, 199, 656
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	853
MroXI	GAANNNNTTC	1 cut(s)	1046
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	275, 408, 1025
MslI	CAYNNNNRTG	1 cut(s)	870
Msp20I	TGGCCA	1 cut(s)	5
MspR9I	CCNGG	2 cut(s)	834, 1013
MunI	CAATTG	1 cut(s)	72
Mva1269I	GAATGC	1 cut(s)	422
MvaI	CCWGG	2 cut(s)	834, 1013
MwoI	GCNNNNNNNGC	8 cut(s)	143, 461, 539, 548, 557, 709, 893, 974
NdeI	CATATG	1 cut(s)	349
NdeII	GATC	4 cut(s)	479, 803, 821, 856
NheI	GCTAGC	1 cut(s)	464
NlaIII	CATG	5 cut(s)	310, 505, 761, 872, 1056
NlaIV	GGNNCC	3 cut(s)	210, 607, 858
NsiI	ATGCAT	1 cut(s)	853
NspV	TTCGAA	2 cut(s)	658, 922
PagI	TCATGA	1 cut(s)	868
PciSI	GCTCTTC	2 cut(s)	270, 462
PctI	GAATGC	1 cut(s)	422
PdmI	GAANNNNTTC	1 cut(s)	1046
PfeI	GAWTC	3 cut(s)	104, 375, 919
PfoI	TCCNGGA	1 cut(s)	1011
PkrI	GCNGC	2 cut(s)	553, 889
PleI	GAGTC	2 cut(s)	626, 908
PpsI	GAGTC	2 cut(s)	626, 908
PsiI	TTATAA	2 cut(s)	614, 992
Psp6I	CCWGG	2 cut(s)	832, 1011
PspGI	CCWGG	2 cut(s)	832, 1011
PspN4I	GGNNCC	3 cut(s)	210, 607, 858
PspPI	GGNCC	3 cut(s)	505, 606, 701
PstNI	CAGNNNCTG	3 cut(s)	596, 752, 1113
PsuI	RGATCY	2 cut(s)	479, 856
RsaI	GTAC	5 cut(s)	494, 581, 876, 1007, 1019
RsaNI	GTAC	5 cut(s)	493, 580, 875, 1006, 1018
RseI	CAYNNNNRTG	1 cut(s)	870
SapI	GCTCTTC	2 cut(s)	270, 462
SaqAI	TTAA	3 cut(s)	275, 408, 1025
SatI	GCNGC	2 cut(s)	552, 888
Sau3AI	GATC	4 cut(s)	479, 803, 821, 856
Sau96I	GGNCC	3 cut(s)	505, 606, 701
SchI	GAGTC	2 cut(s)	627, 909
ScrFI	CCNGG	2 cut(s)	834, 1013
SduI	GDGCHC	2 cut(s)	544, 737
SfaNI	GCATC	6 cut(s)	477, 520, 602, 838, 1038, 1090
SfuI	TTCGAA	2 cut(s)	658, 922
SinI	GGWCC	2 cut(s)	505, 606
SmiMI	CAYNNNNRTG	1 cut(s)	870
Sse9I	AATT	8 cut(s)	72, 272, 277, 403, 825, 960, 1021, 1070
SspI	AATATT	1 cut(s)	99
SspMI	CTAG	2 cut(s)	465, 626
StyD4I	CCNGG	2 cut(s)	832, 1011
StyI	CCWWGG	1 cut(s)	474
TaaI	ACNGT	1 cut(s)	1087
TaiI	ACGT	1 cut(s)	581
TaqI	TCGA	5 cut(s)	102, 268, 538, 658, 922
TasI	AATT	8 cut(s)	72, 272, 277, 403, 825, 960, 1021, 1070
TatI	WGTACW	3 cut(s)	492, 874, 1017
TfiI	GAWTC	3 cut(s)	104, 375, 919
Tru1I	TTAA	3 cut(s)	275, 408, 1025
Tru9I	TTAA	3 cut(s)	275, 408, 1025
TseI	GCWGC	2 cut(s)	551, 887
TspDTI	ATGAA	3 cut(s)	323, 746, 869
TspGWI	ACGGA	2 cut(s)	663, 860
VpaK11BI	GGWCC	2 cut(s)	505, 606
XapI	RAATTY	3 cut(s)	277, 403, 1070
XmnI	GAANNNNTTC	1 cut(s)	1046
XspI	CTAG	2 cut(s)	465, 626
Zsp2I	ATGCAT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.