Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06420 |
| fragaria_vesca | FvH4_4g21320 FvH4_4g21320 |
| malus_domestica | MD13G1141800.v1.1 MD16G1138400.v1.1 |
| prunus_persica | Prupe.1G107100_v2.0.a1 Prupe.1G107100_v2.0.a1 |
| pyrus_communis | pycom13g12340 pycom16g12230 |
| rosa_chinensis | RchiOBHm_Chr4g0427091 |
| rosa_laevigata | RLG00000007262 |
| rosa_multiflora | Rmu_sc0000953.1_g000030 |
| rosa_roxburghii | Rroxscaffold_5G00368920 |
| rosa_rugosa | Rorug04G0215900 Rorug04G0216000 |
| rosa_samantha | Rh4AG271700 Rh4BG277600 Rh4CG292300 Rh4DG275200 |
| rosa_wichuraiana | Rw4G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 173 |
| Acc36I | ACCTGC | 1 cut(s) | 135 |
| AcoI | YGGCCR | 1 cut(s) | 178 |
| AcsI | RAATTY | 2 cut(s) | 90, 149 |
| AflII | CTTAAG | 1 cut(s) | 196 |
| AflIII | ACRYGT | 1 cut(s) | 168 |
| AgsI | TTSAA | 4 cut(s) | 22, 53, 107, 301 |
| AjnI | CCWGG | 2 cut(s) | 116, 220 |
| AluBI | AGCT | 1 cut(s) | 230 |
| AluI | AGCT | 1 cut(s) | 230 |
| Alw26I | GTCTC | 1 cut(s) | 159 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 2 cut(s) | 201, 336 |
| ApoI | RAATTY | 2 cut(s) | 90, 149 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 256, 288 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 347 |
| AsuHPI | GGTGA | 1 cut(s) | 109 |
| BbvI | GCAGC | 2 cut(s) | 213, 348 |
| BccI | CCATC | 2 cut(s) | 293, 305 |
| BciT130I | CCWGG | 2 cut(s) | 118, 222 |
| BclI | TGATCA | 1 cut(s) | 99 |
| BcoDI | GTCTC | 1 cut(s) | 159 |
| BfrI | CTTAAG | 1 cut(s) | 196 |
| BfuAI | ACCTGC | 1 cut(s) | 135 |
| BisI | GCNGC | 2 cut(s) | 202, 337 |
| BlsI | GCNGC | 2 cut(s) | 203, 338 |
| Bme1390I | CCNGG | 2 cut(s) | 118, 222 |
| BmrFI | CCNGG | 2 cut(s) | 118, 222 |
| BsaJI | CCNNGG | 1 cut(s) | 221 |
| BsaWI | WCCGGW | 1 cut(s) | 94 |
| Bse1I | ACTGG | 2 cut(s) | 181, 270 |
| BseBI | CCWGG | 2 cut(s) | 118, 222 |
| BseDI | CCNNGG | 1 cut(s) | 221 |
| BseGI | GGATG | 1 cut(s) | 313 |
| BseNI | ACTGG | 2 cut(s) | 181, 270 |
| BseXI | GCAGC | 2 cut(s) | 213, 348 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiSI | CCGG | 1 cut(s) | 95 |
| BsmAI | GTCTC | 1 cut(s) | 159 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bsp143I | GATC | 3 cut(s) | 9, 85, 99 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspMI | ACCTGC | 1 cut(s) | 135 |
| BspTI | CTTAAG | 1 cut(s) | 196 |
| BsrI | ACTGG | 2 cut(s) | 181, 270 |
| BssECI | CCNNGG | 1 cut(s) | 221 |
| BssMI | GATC | 3 cut(s) | 9, 85, 99 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 222 |
| BstAFI | CTTAAG | 1 cut(s) | 196 |
| BstC8I | GCNNGC | 1 cut(s) | 206 |
| BstF5I | GGATG | 1 cut(s) | 313 |
| BstKTI | GATC | 3 cut(s) | 12, 88, 102 |
| BstMAI | GTCTC | 1 cut(s) | 159 |
| BstMBI | GATC | 3 cut(s) | 9, 85, 99 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 22 |
| BstNI | CCWGG | 2 cut(s) | 118, 222 |
| BstNSI | RCATGY | 1 cut(s) | 172 |
| BstSCI | CCNGG | 2 cut(s) | 116, 220 |
| BstV1I | GCAGC | 2 cut(s) | 213, 348 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 277 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtgZI | GCGATG | 1 cut(s) | 55 |
| BtsCI | GGATG | 1 cut(s) | 313 |
| BveI | ACCTGC | 1 cut(s) | 135 |
| Cac8I | GCNNGC | 1 cut(s) | 206 |
| CviAII | CATG | 1 cut(s) | 169 |
| CviJI | RGCY | 6 cut(s) | 16, 180, 208, 230, 269, 354 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 180, 208, 230, 269, 354 |
| DpnI | GATC | 3 cut(s) | 11, 87, 101 |
| DpnII | GATC | 3 cut(s) | 9, 85, 99 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 173 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 173 |
| EaeI | YGGCCR | 1 cut(s) | 178 |
| EcoRI | GAATTC | 1 cut(s) | 90 |
| EcoRII | CCWGG | 2 cut(s) | 116, 220 |
| FaeI | CATG | 1 cut(s) | 172 |
| FaiI | YATR | 6 cut(s) | 170, 192, 278, 291, 324, 326 |
| FatI | CATG | 1 cut(s) | 168 |
| FbaI | TGATCA | 1 cut(s) | 99 |
| Fnu4HI | GCNGC | 2 cut(s) | 202, 337 |
| FokI | GGATG | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 202, 337 |
| GluI | GCNGC | 2 cut(s) | 202, 337 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| HapII | CCGG | 1 cut(s) | 95 |
| Hin1II | CATG | 1 cut(s) | 172 |
| HinfI | GANTC | 3 cut(s) | 56, 217, 281 |
| HpaII | CCGG | 1 cut(s) | 95 |
| HphI | GGTGA | 1 cut(s) | 109 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 22 |
| Hsp92II | CATG | 1 cut(s) | 172 |
| Ksp22I | TGATCA | 1 cut(s) | 99 |
| Kzo9I | GATC | 3 cut(s) | 9, 85, 99 |
| Lsp1109I | GCAGC | 2 cut(s) | 213, 348 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 3 cut(s) | 11, 87, 101 |
| MboI | GATC | 3 cut(s) | 9, 85, 99 |
| MboII | GAAGA | 3 cut(s) | 19, 65, 259 |
| MluCI | AATT | 2 cut(s) | 90, 149 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 2 cut(s) | 270, 298 |
| MroXI | GAANNNNTTC | 1 cut(s) | 347 |
| MseI | TTAA | 1 cut(s) | 197 |
| MspCI | CTTAAG | 1 cut(s) | 196 |
| MspI | CCGG | 1 cut(s) | 95 |
| MspR9I | CCNGG | 2 cut(s) | 118, 222 |
| MvaI | CCWGG | 2 cut(s) | 118, 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 22 |
| NdeII | GATC | 3 cut(s) | 9, 85, 99 |
| NlaIII | CATG | 1 cut(s) | 172 |
| NspI | RCATGY | 1 cut(s) | 172 |
| PciI | ACATGT | 1 cut(s) | 168 |
| PdmI | GAANNNNTTC | 1 cut(s) | 347 |
| PfeI | GAWTC | 2 cut(s) | 56, 281 |
| PfoI | TCCNGGA | 1 cut(s) | 116 |
| PkrI | GCNGC | 2 cut(s) | 203, 338 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| PscI | ACATGT | 1 cut(s) | 168 |
| Psp6I | CCWGG | 2 cut(s) | 116, 220 |
| PspGI | CCWGG | 2 cut(s) | 116, 220 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 2 cut(s) | 202, 337 |
| Sau3AI | GATC | 3 cut(s) | 9, 85, 99 |
| SchI | GAGTC | 1 cut(s) | 211 |
| ScrFI | CCNGG | 2 cut(s) | 118, 222 |
| SetI | ASST | 4 cut(s) | 129, 232, 262, 350 |
| SmlI | CTYRAG | 1 cut(s) | 196 |
| SmoI | CTYRAG | 1 cut(s) | 196 |
| Sse9I | AATT | 2 cut(s) | 90, 149 |
| StyD4I | CCNGG | 2 cut(s) | 116, 220 |
| TaqI | TCGA | 3 cut(s) | 39, 59, 88 |
| TasI | AATT | 2 cut(s) | 90, 149 |
| TfiI | GAWTC | 2 cut(s) | 56, 281 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TseI | GCWGC | 2 cut(s) | 201, 336 |
| TspDTI | ATGAA | 3 cut(s) | 57, 179, 306 |
| Vha464I | CTTAAG | 1 cut(s) | 196 |
| XapI | RAATTY | 2 cut(s) | 90, 149 |
| XceI | RCATGY | 1 cut(s) | 172 |
| XmnI | GAANNNNTTC | 1 cut(s) | 347 |