Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06420 |
| fragaria_vesca | FvH4_4g21320 FvH4_4g21320 |
| malus_domestica | MD13G1141800.v1.1 MD16G1138400.v1.1 |
| prunus_persica | Prupe.1G107100_v2.0.a1 Prupe.1G107100_v2.0.a1 |
| pyrus_communis | pycom13g12340 pycom16g12230 |
| rosa_chinensis | RchiOBHm_Chr4g0427091 |
| rosa_laevigata | RLG00000007262 |
| rosa_multiflora | Rmu_sc0000953.1_g000030 |
| rosa_roxburghii | Rroxscaffold_5G00368920 |
| rosa_rugosa | Rorug04G0215900 Rorug04G0216000 |
| rosa_samantha | Rh4AG271700 Rh4BG277600 Rh4CG292300 Rh4DG275200 |
| rosa_wichuraiana | Rw4G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 141 |
| AccIII | TCCGGA | 1 cut(s) | 94 |
| AclWI | GGATC | 1 cut(s) | 4 |
| AcsI | RAATTY | 1 cut(s) | 155 |
| AflII | CTTAAG | 1 cut(s) | 202 |
| AgsI | TTSAA | 3 cut(s) | 22, 53, 113 |
| AjnI | CCWGG | 2 cut(s) | 122, 159 |
| AluBI | AGCT | 1 cut(s) | 236 |
| AluI | AGCT | 1 cut(s) | 236 |
| AlwI | GGATC | 1 cut(s) | 4 |
| Ama87I | CYCGRG | 1 cut(s) | 226 |
| Aor13HI | TCCGGA | 1 cut(s) | 94 |
| ApeKI | GCWGC | 2 cut(s) | 207, 342 |
| ApoI | RAATTY | 1 cut(s) | 155 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 262, 294 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 155 |
| AsuC2I | CCSGG | 2 cut(s) | 227, 228 |
| AvaI | CYCGRG | 1 cut(s) | 226 |
| BbvI | GCAGC | 2 cut(s) | 219, 354 |
| BccI | CCATC | 1 cut(s) | 299 |
| BciT130I | CCWGG | 2 cut(s) | 124, 161 |
| BcnI | CCSGG | 2 cut(s) | 227, 228 |
| BfaI | CTAG | 1 cut(s) | 168 |
| BfrI | CTTAAG | 1 cut(s) | 202 |
| BfuAI | ACCTGC | 1 cut(s) | 141 |
| BisI | GCNGC | 2 cut(s) | 208, 343 |
| BlsI | GCNGC | 2 cut(s) | 209, 344 |
| Bme1390I | CCNGG | 4 cut(s) | 124, 161, 227, 228 |
| BmeT110I | CYCGRG | 1 cut(s) | 226 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BmrFI | CCNGG | 4 cut(s) | 124, 161, 227, 228 |
| BpuMI | CCSGG | 2 cut(s) | 227, 228 |
| BsaJI | CCNNGG | 3 cut(s) | 225, 226, 227 |
| BsaWI | WCCGGW | 1 cut(s) | 94 |
| Bse1I | ACTGG | 1 cut(s) | 276 |
| BseAI | TCCGGA | 1 cut(s) | 94 |
| BseBI | CCWGG | 2 cut(s) | 124, 161 |
| BseDI | CCNNGG | 3 cut(s) | 225, 226, 227 |
| BseGI | GGATG | 1 cut(s) | 319 |
| BseNI | ACTGG | 1 cut(s) | 276 |
| BseXI | GCAGC | 2 cut(s) | 219, 354 |
| BsiHKCI | CYCGRG | 1 cut(s) | 226 |
| BsiSI | CCGG | 2 cut(s) | 95, 227 |
| BsoBI | CYCGRG | 1 cut(s) | 226 |
| Bsp13I | TCCGGA | 1 cut(s) | 94 |
| Bsp143I | GATC | 3 cut(s) | 9, 85, 105 |
| BspEI | TCCGGA | 1 cut(s) | 94 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspMI | ACCTGC | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 4 |
| BspTI | CTTAAG | 1 cut(s) | 202 |
| BsrI | ACTGG | 1 cut(s) | 276 |
| BssECI | CCNNGG | 3 cut(s) | 225, 226, 227 |
| BssMI | GATC | 3 cut(s) | 9, 85, 105 |
| Bst2UI | CCWGG | 2 cut(s) | 124, 161 |
| Bst4CI | ACNGT | 1 cut(s) | 320 |
| BstAFI | CTTAAG | 1 cut(s) | 202 |
| BstC8I | GCNNGC | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 319 |
| BstKTI | GATC | 3 cut(s) | 12, 88, 108 |
| BstMBI | GATC | 3 cut(s) | 9, 85, 105 |
| BstNI | CCWGG | 2 cut(s) | 124, 161 |
| BstSCI | CCNGG | 4 cut(s) | 122, 159, 225, 226 |
| BstV1I | GCAGC | 2 cut(s) | 219, 354 |
| BstX2I | RGATCY | 1 cut(s) | 9 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 283 |
| BstYI | RGATCY | 1 cut(s) | 9 |
| BtsCI | GGATG | 1 cut(s) | 319 |
| BveI | ACCTGC | 1 cut(s) | 141 |
| Cac8I | GCNNGC | 1 cut(s) | 212 |
| Cfr9I | CCCGGG | 1 cut(s) | 226 |
| CviJI | RGCY | 4 cut(s) | 214, 236, 275, 360 |
| CviKI_1 | RGCY | 4 cut(s) | 214, 236, 275, 360 |
| DpnI | GATC | 3 cut(s) | 11, 87, 107 |
| DpnII | GATC | 3 cut(s) | 9, 85, 105 |
| Eco88I | CYCGRG | 1 cut(s) | 226 |
| EcoRII | CCWGG | 2 cut(s) | 122, 159 |
| FaiI | YATR | 6 cut(s) | 68, 176, 198, 297, 330, 332 |
| Fnu4HI | GCNGC | 2 cut(s) | 208, 343 |
| FokI | GGATG | 1 cut(s) | 326 |
| Fsp4HI | GCNGC | 2 cut(s) | 208, 343 |
| FspBI | CTAG | 1 cut(s) | 168 |
| GluI | GCNGC | 2 cut(s) | 208, 343 |
| HapII | CCGG | 2 cut(s) | 95, 227 |
| HinfI | GANTC | 3 cut(s) | 56, 98, 287 |
| HpaII | CCGG | 2 cut(s) | 95, 227 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyCH4III | ACNGT | 1 cut(s) | 320 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| Kpn2I | TCCGGA | 1 cut(s) | 94 |
| Kzo9I | GATC | 3 cut(s) | 9, 85, 105 |
| Lsp1109I | GCAGC | 2 cut(s) | 219, 354 |
| MaeI | CTAG | 1 cut(s) | 168 |
| MaeIII | GTNAC | 1 cut(s) | 335 |
| MalI | GATC | 3 cut(s) | 11, 87, 107 |
| MboI | GATC | 3 cut(s) | 9, 85, 105 |
| MboII | GAAGA | 3 cut(s) | 19, 65, 265 |
| MflI | RGATCY | 1 cut(s) | 9 |
| MluCI | AATT | 2 cut(s) | 69, 155 |
| MnlI | CCTC | 2 cut(s) | 276, 304 |
| MroI | TCCGGA | 1 cut(s) | 94 |
| MroXI | GAANNNNTTC | 1 cut(s) | 155 |
| MseI | TTAA | 1 cut(s) | 203 |
| MspCI | CTTAAG | 1 cut(s) | 202 |
| MspI | CCGG | 2 cut(s) | 95, 227 |
| MspR9I | CCNGG | 4 cut(s) | 124, 161, 227, 228 |
| MvaI | CCWGG | 2 cut(s) | 124, 161 |
| NciI | CCSGG | 2 cut(s) | 227, 228 |
| NdeII | GATC | 3 cut(s) | 9, 85, 105 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| PdmI | GAANNNNTTC | 1 cut(s) | 155 |
| PfeI | GAWTC | 3 cut(s) | 56, 98, 287 |
| PfoI | TCCNGGA | 1 cut(s) | 122 |
| PkrI | GCNGC | 2 cut(s) | 209, 344 |
| Psp6I | CCWGG | 2 cut(s) | 122, 159 |
| PspGI | CCWGG | 2 cut(s) | 122, 159 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PsuI | RGATCY | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 203 |
| SatI | GCNGC | 2 cut(s) | 208, 343 |
| Sau3AI | GATC | 3 cut(s) | 9, 85, 105 |
| ScrFI | CCNGG | 4 cut(s) | 124, 161, 227, 228 |
| SetI | ASST | 4 cut(s) | 135, 238, 268, 356 |
| SmaI | CCCGGG | 1 cut(s) | 228 |
| SmlI | CTYRAG | 1 cut(s) | 202 |
| SmoI | CTYRAG | 1 cut(s) | 202 |
| Sse9I | AATT | 2 cut(s) | 69, 155 |
| SspMI | CTAG | 1 cut(s) | 168 |
| StyD4I | CCNGG | 4 cut(s) | 122, 159, 225, 226 |
| TaaI | ACNGT | 1 cut(s) | 320 |
| TaqI | TCGA | 3 cut(s) | 39, 88, 104 |
| TasI | AATT | 2 cut(s) | 69, 155 |
| TfiI | GAWTC | 3 cut(s) | 56, 98, 287 |
| Tru1I | TTAA | 1 cut(s) | 203 |
| Tru9I | TTAA | 1 cut(s) | 203 |
| TseI | GCWGC | 2 cut(s) | 207, 342 |
| TspDTI | ATGAA | 2 cut(s) | 57, 312 |
| TspMI | CCCGGG | 1 cut(s) | 226 |
| Vha464I | CTTAAG | 1 cut(s) | 202 |
| XapI | RAATTY | 1 cut(s) | 155 |
| XmaI | CCCGGG | 1 cut(s) | 226 |
| XmnI | GAANNNNTTC | 1 cut(s) | 155 |
| XspI | CTAG | 1 cut(s) | 168 |