Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06420 |
| fragaria_vesca | FvH4_4g21320 FvH4_4g21320 |
| malus_domestica | MD13G1141800.v1.1 MD16G1138400.v1.1 |
| prunus_persica | Prupe.1G107100_v2.0.a1 Prupe.1G107100_v2.0.a1 |
| pyrus_communis | pycom13g12340 pycom16g12230 |
| rosa_chinensis | RchiOBHm_Chr4g0427091 |
| rosa_laevigata | RLG00000007262 |
| rosa_multiflora | Rmu_sc0000953.1_g000030 |
| rosa_roxburghii | Rroxscaffold_5G00368920 |
| rosa_rugosa | Rorug04G0215900 Rorug04G0216000 |
| rosa_samantha | Rh4AG271700 Rh4BG277600 Rh4CG292300 Rh4DG275200 |
| rosa_wichuraiana | Rw4G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 178 |
| AfeI | AGCGCT | 1 cut(s) | 231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 136 |
| AgsI | TTSAA | 4 cut(s) | 22, 53, 107, 212 |
| AjnI | CCWGG | 2 cut(s) | 153, 220 |
| Aor51HI | AGCGCT | 1 cut(s) | 231 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 2 cut(s) | 201, 336 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 256, 288 |
| AspLEI | GCGC | 1 cut(s) | 232 |
| BalI | TGGCCA | 1 cut(s) | 180 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 134, 166 |
| BbvI | GCAGC | 2 cut(s) | 213, 348 |
| BccI | CCATC | 1 cut(s) | 305 |
| BciT130I | CCWGG | 2 cut(s) | 155, 222 |
| BfaI | CTAG | 1 cut(s) | 162 |
| BfoI | RGCGCY | 1 cut(s) | 233 |
| BisI | GCNGC | 2 cut(s) | 202, 337 |
| BlsI | GCNGC | 2 cut(s) | 203, 338 |
| Bme1390I | CCNGG | 2 cut(s) | 155, 222 |
| BmiI | GGNNCC | 1 cut(s) | 159 |
| BmrFI | CCNGG | 2 cut(s) | 155, 222 |
| BsaJI | CCNNGG | 1 cut(s) | 221 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 136 |
| Bse118I | RCCGGY | 1 cut(s) | 204 |
| Bse1I | ACTGG | 2 cut(s) | 95, 181 |
| BseBI | CCWGG | 2 cut(s) | 155, 222 |
| BseDI | CCNNGG | 1 cut(s) | 221 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseNI | ACTGG | 2 cut(s) | 95, 181 |
| BseXI | GCAGC | 2 cut(s) | 213, 348 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiSI | CCGG | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bsp143I | GATC | 2 cut(s) | 9, 85 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspLI | GGNNCC | 1 cut(s) | 159 |
| BsrFI | RCCGGY | 1 cut(s) | 204 |
| BsrI | ACTGG | 2 cut(s) | 95, 181 |
| BssAI | RCCGGY | 1 cut(s) | 204 |
| BssECI | CCNNGG | 1 cut(s) | 221 |
| BssMI | GATC | 2 cut(s) | 9, 85 |
| Bst2UI | CCWGG | 2 cut(s) | 155, 222 |
| BstC8I | GCNNGC | 1 cut(s) | 206 |
| BstH2I | RGCGCY | 1 cut(s) | 233 |
| BstHHI | GCGC | 1 cut(s) | 232 |
| BstKTI | GATC | 2 cut(s) | 12, 88 |
| BstMBI | GATC | 2 cut(s) | 9, 85 |
| BstNI | CCWGG | 2 cut(s) | 155, 222 |
| BstSCI | CCNGG | 2 cut(s) | 153, 220 |
| BstV1I | GCAGC | 2 cut(s) | 213, 348 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| Cac8I | GCNNGC | 1 cut(s) | 206 |
| CfoI | GCGC | 1 cut(s) | 232 |
| Cfr10I | RCCGGY | 1 cut(s) | 204 |
| CseI | GACGC | 1 cut(s) | 35 |
| CsiI | ACCWGGT | 1 cut(s) | 153 |
| CviJI | RGCY | 3 cut(s) | 180, 204, 208 |
| CviKI_1 | RGCY | 3 cut(s) | 180, 204, 208 |
| DpnI | GATC | 2 cut(s) | 11, 87 |
| DpnII | GATC | 2 cut(s) | 9, 85 |
| EaeI | YGGCCR | 1 cut(s) | 178 |
| Eco47III | AGCGCT | 1 cut(s) | 231 |
| EcoRII | CCWGG | 2 cut(s) | 153, 220 |
| FaiI | YATR | 6 cut(s) | 170, 192, 276, 278, 324, 326 |
| FauNDI | CATATG | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 2 cut(s) | 202, 337 |
| Fsp4HI | GCNGC | 2 cut(s) | 202, 337 |
| FspBI | CTAG | 1 cut(s) | 162 |
| GlaI | GCGC | 1 cut(s) | 231 |
| GluI | GCNGC | 2 cut(s) | 202, 337 |
| HaeII | RGCGCY | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| HapII | CCGG | 1 cut(s) | 205 |
| HgaI | GACGC | 1 cut(s) | 35 |
| HhaI | GCGC | 1 cut(s) | 232 |
| Hin6I | GCGC | 1 cut(s) | 230 |
| HinP1I | GCGC | 1 cut(s) | 230 |
| HinfI | GANTC | 3 cut(s) | 56, 217, 281 |
| HpaII | CCGG | 1 cut(s) | 205 |
| Hpy188III | TCNNGA | 1 cut(s) | 50 |
| HspAI | GCGC | 1 cut(s) | 230 |
| KroI | GCCGGC | 1 cut(s) | 204 |
| KroNI | GCCGGC | 1 cut(s) | 206 |
| Kzo9I | GATC | 2 cut(s) | 9, 85 |
| Lsp1109I | GCAGC | 2 cut(s) | 213, 348 |
| MabI | ACCWGGT | 1 cut(s) | 153 |
| MaeI | CTAG | 1 cut(s) | 162 |
| MaeIII | GTNAC | 2 cut(s) | 296, 329 |
| MalI | GATC | 2 cut(s) | 11, 87 |
| MboI | GATC | 2 cut(s) | 9, 85 |
| MboII | GAAGA | 4 cut(s) | 65, 154, 259, 317 |
| MlsI | TGGCCA | 1 cut(s) | 180 |
| MluNI | TGGCCA | 1 cut(s) | 180 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 3 cut(s) | 111, 137, 270 |
| Mox20I | TGGCCA | 1 cut(s) | 180 |
| MroNI | GCCGGC | 1 cut(s) | 204 |
| MscI | TGGCCA | 1 cut(s) | 180 |
| MseI | TTAA | 2 cut(s) | 197, 355 |
| Msp20I | TGGCCA | 1 cut(s) | 180 |
| MspI | CCGG | 1 cut(s) | 205 |
| MspR9I | CCNGG | 2 cut(s) | 155, 222 |
| MvaI | CCWGG | 2 cut(s) | 155, 222 |
| NaeI | GCCGGC | 1 cut(s) | 206 |
| NdeI | CATATG | 1 cut(s) | 276 |
| NdeII | GATC | 2 cut(s) | 9, 85 |
| NgoMIV | GCCGGC | 1 cut(s) | 204 |
| NlaIV | GGNNCC | 1 cut(s) | 159 |
| PdiI | GCCGGC | 1 cut(s) | 206 |
| PfeI | GAWTC | 2 cut(s) | 56, 281 |
| PkrI | GCNGC | 2 cut(s) | 203, 338 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| Psp6I | CCWGG | 2 cut(s) | 153, 220 |
| PspGI | CCWGG | 2 cut(s) | 153, 220 |
| PspN4I | GGNNCC | 1 cut(s) | 159 |
| SaqAI | TTAA | 2 cut(s) | 197, 355 |
| SatI | GCNGC | 2 cut(s) | 202, 337 |
| Sau3AI | GATC | 2 cut(s) | 9, 85 |
| SchI | GAGTC | 1 cut(s) | 211 |
| ScrFI | CCNGG | 2 cut(s) | 155, 222 |
| SetI | ASST | 4 cut(s) | 129, 156, 262, 350 |
| SexAI | ACCWGGT | 1 cut(s) | 153 |
| SspMI | CTAG | 1 cut(s) | 162 |
| StyD4I | CCNGG | 2 cut(s) | 153, 220 |
| TaqI | TCGA | 3 cut(s) | 39, 88, 116 |
| TfiI | GAWTC | 2 cut(s) | 56, 281 |
| Tru1I | TTAA | 2 cut(s) | 197, 355 |
| Tru9I | TTAA | 2 cut(s) | 197, 355 |
| TseI | GCWGC | 2 cut(s) | 201, 336 |
| XspI | CTAG | 1 cut(s) | 162 |