Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06420 |
| fragaria_vesca | FvH4_4g21320 FvH4_4g21320 |
| malus_domestica | MD13G1141800.v1.1 MD16G1138400.v1.1 |
| prunus_persica | Prupe.1G107100_v2.0.a1 Prupe.1G107100_v2.0.a1 |
| pyrus_communis | pycom13g12340 pycom16g12230 |
| rosa_chinensis | RchiOBHm_Chr4g0427091 |
| rosa_laevigata | RLG00000007262 |
| rosa_multiflora | Rmu_sc0000953.1_g000030 |
| rosa_roxburghii | Rroxscaffold_5G00368920 |
| rosa_rugosa | Rorug04G0215900 Rorug04G0216000 |
| rosa_samantha | Rh4AG271700 Rh4BG277600 Rh4CG292300 Rh4DG275200 |
| rosa_wichuraiana | Rw4G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 135 |
| AccII | CGCG | 1 cut(s) | 276 |
| AclWI | GGATC | 2 cut(s) | 4, 94 |
| AcsI | RAATTY | 1 cut(s) | 149 |
| AflII | CTTAAG | 1 cut(s) | 196 |
| AgsI | TTSAA | 3 cut(s) | 22, 53, 107 |
| AjnI | CCWGG | 1 cut(s) | 116 |
| AluBI | AGCT | 1 cut(s) | 230 |
| AluI | AGCT | 1 cut(s) | 230 |
| AlwI | GGATC | 2 cut(s) | 4, 94 |
| ApeKI | GCWGC | 2 cut(s) | 201, 336 |
| ApoI | RAATTY | 1 cut(s) | 149 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 256, 288 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 149 |
| AsuC2I | CCSGG | 1 cut(s) | 222 |
| AsuII | TTCGAA | 1 cut(s) | 74 |
| BbvI | GCAGC | 2 cut(s) | 213, 348 |
| BccI | CCATC | 1 cut(s) | 293 |
| BciT130I | CCWGG | 1 cut(s) | 118 |
| BcnI | CCSGG | 1 cut(s) | 222 |
| BfaI | CTAG | 1 cut(s) | 162 |
| BfrI | CTTAAG | 1 cut(s) | 196 |
| BfuAI | ACCTGC | 1 cut(s) | 135 |
| BisI | GCNGC | 2 cut(s) | 202, 337 |
| BlsI | GCNGC | 2 cut(s) | 203, 338 |
| Bme1390I | CCNGG | 2 cut(s) | 118, 222 |
| BmrFI | CCNGG | 2 cut(s) | 118, 222 |
| Bpu14I | TTCGAA | 1 cut(s) | 74 |
| BpuMI | CCSGG | 1 cut(s) | 222 |
| BsaJI | CCNNGG | 1 cut(s) | 221 |
| Bse1I | ACTGG | 2 cut(s) | 13, 270 |
| BseBI | CCWGG | 1 cut(s) | 118 |
| BseDI | CCNNGG | 1 cut(s) | 221 |
| BseGI | GGATG | 1 cut(s) | 313 |
| BseNI | ACTGG | 2 cut(s) | 13, 270 |
| BseXI | GCAGC | 2 cut(s) | 213, 348 |
| Bsh1236I | CGCG | 1 cut(s) | 276 |
| BsiSI | CCGG | 2 cut(s) | 131, 221 |
| Bsp119I | TTCGAA | 1 cut(s) | 74 |
| Bsp143I | GATC | 3 cut(s) | 9, 85, 99 |
| BspFNI | CGCG | 1 cut(s) | 276 |
| BspMI | ACCTGC | 1 cut(s) | 135 |
| BspPI | GGATC | 2 cut(s) | 4, 94 |
| BspT104I | TTCGAA | 1 cut(s) | 74 |
| BspTI | CTTAAG | 1 cut(s) | 196 |
| BsrI | ACTGG | 2 cut(s) | 13, 270 |
| BssECI | CCNNGG | 1 cut(s) | 221 |
| BssMI | GATC | 3 cut(s) | 9, 85, 99 |
| Bst2UI | CCWGG | 1 cut(s) | 118 |
| Bst4CI | ACNGT | 1 cut(s) | 314 |
| BstAFI | CTTAAG | 1 cut(s) | 196 |
| BstBI | TTCGAA | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 1 cut(s) | 206 |
| BstF5I | GGATG | 1 cut(s) | 313 |
| BstFNI | CGCG | 1 cut(s) | 276 |
| BstKTI | GATC | 3 cut(s) | 12, 88, 102 |
| BstMBI | GATC | 3 cut(s) | 9, 85, 99 |
| BstNI | CCWGG | 1 cut(s) | 118 |
| BstSCI | CCNGG | 2 cut(s) | 116, 220 |
| BstUI | CGCG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 2 cut(s) | 213, 348 |
| BstX2I | RGATCY | 1 cut(s) | 9 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 277 |
| BstYI | RGATCY | 1 cut(s) | 9 |
| BtsCI | GGATG | 1 cut(s) | 313 |
| BveI | ACCTGC | 1 cut(s) | 135 |
| Cac8I | GCNNGC | 1 cut(s) | 206 |
| CviJI | RGCY | 3 cut(s) | 208, 230, 269 |
| CviKI_1 | RGCY | 3 cut(s) | 208, 230, 269 |
| DpnI | GATC | 3 cut(s) | 11, 87, 101 |
| DpnII | GATC | 3 cut(s) | 9, 85, 99 |
| EcoRII | CCWGG | 1 cut(s) | 116 |
| FaiI | YATR | 7 cut(s) | 66, 68, 170, 192, 291, 324, 326 |
| Fnu4HI | GCNGC | 2 cut(s) | 202, 337 |
| FokI | GGATG | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 202, 337 |
| FspBI | CTAG | 1 cut(s) | 162 |
| GluI | GCNGC | 2 cut(s) | 202, 337 |
| HapII | CCGG | 2 cut(s) | 131, 221 |
| HinfI | GANTC | 3 cut(s) | 56, 217, 281 |
| HpaII | CCGG | 2 cut(s) | 131, 221 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4III | ACNGT | 1 cut(s) | 314 |
| Kzo9I | GATC | 3 cut(s) | 9, 85, 99 |
| Lsp1109I | GCAGC | 2 cut(s) | 213, 348 |
| MaeI | CTAG | 1 cut(s) | 162 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 3 cut(s) | 11, 87, 101 |
| MboI | GATC | 3 cut(s) | 9, 85, 99 |
| MboII | GAAGA | 1 cut(s) | 65 |
| MflI | RGATCY | 1 cut(s) | 9 |
| MluCI | AATT | 2 cut(s) | 69, 149 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 2 cut(s) | 270, 298 |
| MroXI | GAANNNNTTC | 1 cut(s) | 149 |
| MseI | TTAA | 1 cut(s) | 197 |
| MspCI | CTTAAG | 1 cut(s) | 196 |
| MspI | CCGG | 2 cut(s) | 131, 221 |
| MspR9I | CCNGG | 2 cut(s) | 118, 222 |
| MvaI | CCWGG | 1 cut(s) | 118 |
| MvnI | CGCG | 1 cut(s) | 276 |
| NciI | CCSGG | 1 cut(s) | 222 |
| NdeII | GATC | 3 cut(s) | 9, 85, 99 |
| NspV | TTCGAA | 1 cut(s) | 74 |
| PdmI | GAANNNNTTC | 1 cut(s) | 149 |
| PfeI | GAWTC | 2 cut(s) | 56, 281 |
| PfoI | TCCNGGA | 1 cut(s) | 116 |
| PkrI | GCNGC | 2 cut(s) | 203, 338 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| Psp6I | CCWGG | 1 cut(s) | 116 |
| PspGI | CCWGG | 1 cut(s) | 116 |
| PsuI | RGATCY | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 2 cut(s) | 202, 337 |
| Sau3AI | GATC | 3 cut(s) | 9, 85, 99 |
| SchI | GAGTC | 1 cut(s) | 211 |
| ScrFI | CCNGG | 2 cut(s) | 118, 222 |
| SetI | ASST | 4 cut(s) | 129, 232, 262, 350 |
| SfuI | TTCGAA | 1 cut(s) | 74 |
| SmlI | CTYRAG | 1 cut(s) | 196 |
| SmoI | CTYRAG | 1 cut(s) | 196 |
| Sse9I | AATT | 2 cut(s) | 69, 149 |
| SspMI | CTAG | 1 cut(s) | 162 |
| StyD4I | CCNGG | 2 cut(s) | 116, 220 |
| TaaI | ACNGT | 1 cut(s) | 314 |
| TaqI | TCGA | 4 cut(s) | 39, 59, 74, 88 |
| TasI | AATT | 2 cut(s) | 69, 149 |
| TfiI | GAWTC | 2 cut(s) | 56, 281 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TseI | GCWGC | 2 cut(s) | 201, 336 |
| TspDTI | ATGAA | 2 cut(s) | 57, 306 |
| Vha464I | CTTAAG | 1 cut(s) | 196 |
| XapI | RAATTY | 1 cut(s) | 149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 149 |
| XspI | CTAG | 1 cut(s) | 162 |