Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06420 |
| fragaria_vesca | FvH4_4g21320 FvH4_4g21320 |
| malus_domestica | MD13G1141800.v1.1 MD16G1138400.v1.1 |
| prunus_persica | Prupe.1G107100_v2.0.a1 Prupe.1G107100_v2.0.a1 |
| pyrus_communis | pycom13g12340 pycom16g12230 |
| rosa_chinensis | RchiOBHm_Chr4g0427091 |
| rosa_laevigata | RLG00000007262 |
| rosa_multiflora | Rmu_sc0000953.1_g000030 |
| rosa_roxburghii | Rroxscaffold_5G00368920 |
| rosa_rugosa | Rorug04G0215900 Rorug04G0216000 |
| rosa_samantha | Rh4AG271700 Rh4BG277600 Rh4CG292300 Rh4DG275200 |
| rosa_wichuraiana | Rw4G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 397 |
| AcoI | YGGCCR | 1 cut(s) | 315 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AcyI | GRCGYC | 1 cut(s) | 169 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 64, 227, 324, 349 |
| AflIII | ACRYGT | 1 cut(s) | 250 |
| AgsI | TTSAA | 3 cut(s) | 34, 310, 334 |
| AluBI | AGCT | 1 cut(s) | 258 |
| AluI | AGCT | 1 cut(s) | 258 |
| AlwI | GGATC | 1 cut(s) | 397 |
| AoxI | GGCC | 1 cut(s) | 315 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 3 cut(s) | 152, 364, 473 |
| BaeGI | GKGCMC | 1 cut(s) | 250 |
| BalI | TGGCCA | 1 cut(s) | 317 |
| BbsI | GAAGAC | 1 cut(s) | 322 |
| BccI | CCATC | 2 cut(s) | 93, 307 |
| BfaI | CTAG | 1 cut(s) | 324 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BmsI | GCATC | 1 cut(s) | 34 |
| BpiI | GAAGAC | 1 cut(s) | 322 |
| BpmI | CTGGAG | 1 cut(s) | 138 |
| BsaHI | GRCGYC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 1 cut(s) | 164 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 64, 227, 324, 349 |
| Bse3DI | GCAATG | 1 cut(s) | 193 |
| BseDI | CCNNGG | 1 cut(s) | 164 |
| BseGI | GGATG | 2 cut(s) | 8, 193 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 64, 227, 324, 349 |
| BseMI | GCAATG | 1 cut(s) | 193 |
| BseMII | CTCAG | 1 cut(s) | 86 |
| BseSI | GKGCMC | 1 cut(s) | 250 |
| BsgI | GTGCAG | 1 cut(s) | 262 |
| BshFI | GGCC | 1 cut(s) | 317 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 64, 227, 324, 349 |
| BsnI | GGCC | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 1 cut(s) | 250 |
| Bsp143I | GATC | 1 cut(s) | 389 |
| Bsp19I | CCATGG | 1 cut(s) | 164 |
| BspANI | GGCC | 1 cut(s) | 317 |
| BspCNI | CTCAG | 1 cut(s) | 87 |
| BspMAI | CTGCAG | 1 cut(s) | 274 |
| BspPI | GGATC | 1 cut(s) | 397 |
| BsrDI | GCAATG | 1 cut(s) | 193 |
| BssECI | CCNNGG | 1 cut(s) | 164 |
| BssMI | GATC | 1 cut(s) | 389 |
| BssNI | GRCGYC | 1 cut(s) | 169 |
| BssT1I | CCWWGG | 1 cut(s) | 164 |
| BstACI | GRCGYC | 1 cut(s) | 169 |
| BstDEI | CTNAG | 1 cut(s) | 95 |
| BstDSI | CCRYGG | 1 cut(s) | 164 |
| BstF5I | GGATG | 2 cut(s) | 8, 193 |
| BstKTI | GATC | 1 cut(s) | 392 |
| BstMBI | GATC | 1 cut(s) | 389 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 269 |
| BstNSI | RCATGY | 1 cut(s) | 254 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstSLI | GKGCMC | 1 cut(s) | 250 |
| BstV2I | GAAGAC | 1 cut(s) | 322 |
| BstX2I | RGATCY | 1 cut(s) | 389 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 184 |
| BstYI | RGATCY | 1 cut(s) | 389 |
| BsuRI | GGCC | 1 cut(s) | 317 |
| BtgI | CCRYGG | 1 cut(s) | 164 |
| BtgZI | GCGATG | 1 cut(s) | 246 |
| BtsCI | GGATG | 2 cut(s) | 8, 193 |
| CseI | GACGC | 1 cut(s) | 158 |
| CviAII | CATG | 2 cut(s) | 165, 251 |
| CviJI | RGCY | 5 cut(s) | 128, 220, 258, 317, 365 |
| CviKI_1 | RGCY | 5 cut(s) | 128, 220, 258, 317, 365 |
| DdeI | CTNAG | 1 cut(s) | 95 |
| DpnI | GATC | 1 cut(s) | 391 |
| DpnII | GATC | 1 cut(s) | 389 |
| EaeI | YGGCCR | 1 cut(s) | 315 |
| Eco130I | CCWWGG | 1 cut(s) | 164 |
| EcoT14I | CCWWGG | 1 cut(s) | 164 |
| ErhI | CCWWGG | 1 cut(s) | 164 |
| FaeI | CATG | 2 cut(s) | 168, 254 |
| FatI | CATG | 2 cut(s) | 164, 250 |
| FauNDI | CATATG | 1 cut(s) | 179 |
| FokI | GGATG | 1 cut(s) | 200 |
| FspBI | CTAG | 1 cut(s) | 324 |
| GsuI | CTGGAG | 1 cut(s) | 138 |
| HaeIII | GGCC | 1 cut(s) | 317 |
| HgaI | GACGC | 1 cut(s) | 158 |
| Hin1I | GRCGYC | 1 cut(s) | 169 |
| Hin1II | CATG | 2 cut(s) | 168, 254 |
| HinfI | GANTC | 2 cut(s) | 5, 236 |
| HphI | GGTGA | 3 cut(s) | 152, 364, 473 |
| Hpy188I | TCNGA | 2 cut(s) | 43, 96 |
| Hpy188III | TCNNGA | 3 cut(s) | 12, 58, 117 |
| HpyAV | CCTTC | 3 cut(s) | 139, 403, 422 |
| HpyCH4V | TGCA | 4 cut(s) | 198, 243, 272, 456 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 269 |
| HpyF3I | CTNAG | 1 cut(s) | 95 |
| Hsp92I | GRCGYC | 1 cut(s) | 169 |
| Hsp92II | CATG | 2 cut(s) | 168, 254 |
| Kzo9I | GATC | 1 cut(s) | 389 |
| LpnPI | CCDG | 6 cut(s) | 25, 71, 102, 229, 265, 335 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 1 cut(s) | 324 |
| MaeIII | GTNAC | 2 cut(s) | 82, 295 |
| MalI | GATC | 1 cut(s) | 391 |
| MboI | GATC | 1 cut(s) | 389 |
| MboII | GAAGA | 3 cut(s) | 134, 322, 322 |
| MflI | RGATCY | 1 cut(s) | 389 |
| MhlI | GDGCHC | 1 cut(s) | 250 |
| MlsI | TGGCCA | 1 cut(s) | 317 |
| MluCI | AATT | 1 cut(s) | 15 |
| MluNI | TGGCCA | 1 cut(s) | 317 |
| MnlI | CCTC | 5 cut(s) | 124, 168, 348, 355, 367 |
| Mox20I | TGGCCA | 1 cut(s) | 317 |
| MscI | TGGCCA | 1 cut(s) | 317 |
| MseI | TTAA | 1 cut(s) | 437 |
| Msp20I | TGGCCA | 1 cut(s) | 317 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 269 |
| NcoI | CCATGG | 1 cut(s) | 164 |
| NdeI | CATATG | 1 cut(s) | 179 |
| NdeII | GATC | 1 cut(s) | 389 |
| NlaIII | CATG | 2 cut(s) | 168, 254 |
| NmuCI | GTSAC | 1 cut(s) | 295 |
| NspI | RCATGY | 1 cut(s) | 254 |
| PciI | ACATGT | 1 cut(s) | 250 |
| PfeI | GAWTC | 2 cut(s) | 5, 236 |
| PscI | ACATGT | 1 cut(s) | 250 |
| PstI | CTGCAG | 1 cut(s) | 274 |
| PsuI | RGATCY | 1 cut(s) | 389 |
| SaqAI | TTAA | 1 cut(s) | 437 |
| Sau3AI | GATC | 1 cut(s) | 389 |
| SduI | GDGCHC | 1 cut(s) | 250 |
| SetI | ASST | 6 cut(s) | 116, 150, 260, 378, 414, 463 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| Sse9I | AATT | 1 cut(s) | 15 |
| SspMI | CTAG | 1 cut(s) | 324 |
| StyI | CCWWGG | 1 cut(s) | 164 |
| TasI | AATT | 1 cut(s) | 15 |
| TfiI | GAWTC | 2 cut(s) | 5, 236 |
| Tru1I | TTAA | 1 cut(s) | 437 |
| Tru9I | TTAA | 1 cut(s) | 437 |
| TseFI | GTSAC | 1 cut(s) | 295 |
| Tsp45I | GTSAC | 1 cut(s) | 295 |
| XapI | RAATTY | 1 cut(s) | 15 |
| XceI | RCATGY | 1 cut(s) | 254 |
| XspI | CTAG | 1 cut(s) | 324 |