Prupe.1G108900_v2.0.a1

Wall-associated receptor kinase C-terminal

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
8710179 .. 8711721
1543 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G108900.1

Sequence Viewer

Length: 978 bp
ATGCCAATTGCCACAGTAACTAATTTTCAAATCTTCACAAAAAAAATAATGTGGAGCCACTCTCAGTCAAAACGACTCATCACCCTCCTCAGCCTCCTCCTCCACTTCCTCCCCGCCCTAACCCTCTCCCCGTGCCGCACCACCTGCGGCCCCATCCCCGTAAACTATCCCTTCGGCCTCGACGACGGCTGCGGCGCGCCGCAGTTCCGTGGCATGCTCAACTGCTCCACCGACCTCTTCTTCACCACCCCATCCGGCAACTACAAAGTCCAGTCTATCGACTACGACAAGAAAAACCTCGTCGTTTACGACCCCGCCATGTCAACCTGCTCCATCCTCCAACCCCACCACGACTTCCTCTTGACCCCTATCCAGTCAGCCATAATCCCACCGACCTCGGACACCGTCTTCGCCCTCCTCAACTGCTCCGTCGACTCCCCTGTCCTCAACCACTACAAGTCCCTCTGCTTCAACTTCTCCGGCCACTCCTGCGACGAGCTTTACAACTCATGCACCGCGTTTCGGCTTTTTCGGTTGGGCATGGGGTTAAGCAACGGGACTAATAGTACTGGTAGTACTAATTTTGTTCCGCCGTGCTGTTTTACGGGGTATGATACTGTGAAGTTCATGAGCATGAATATTTTGGATTGTACGCATTATACTAGCGTGACTAATACGGATCGGTTGAGAGGTTTGGGACCGTTGGATTGGATTTATGGGATTAAGTTGAGCTTTGCGGTTCCGGATACTGGGTGTGAGAGATGTGCTCAGTCCGGTGGGACTTGTGGGTTTGATACTGAGACTCAAGTGTCTCTCTGCCTCTGCTCTACTTTCACCAATTCTACTAGAGAATGTGCTGCAGGCAGTGATACGGCAGAAGGAAGTCATTGCGCTCCCGCGATACTCTTTCAAGCATTCTTTGTGATTATGGGGGCATTGTTAATCTGTTTGCATGATTTTTATCTTTCTTTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

326

Amino Acids

35.6

Weight (kDa)

5.94

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013145)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 152
AasI GACNNNNNNGTC 2 cut(s) 440, 808
Acc36I ACCTGC 2 cut(s) 152, 335
AccI GTMKAC 1 cut(s) 432
AccII CGCG 3 cut(s) 197, 518, 899
AccIII TCCGGA 1 cut(s) 742
AclWI GGATC 1 cut(s) 687
AcoI YGGCCR 1 cut(s) 481
AfaI GTAC 3 cut(s) 568, 577, 652
AfiI CCNNNNNNNGG 2 cut(s) 522, 749
AgsI TTSAA 3 cut(s) 29, 472, 911
AluBI AGCT 2 cut(s) 499, 732
AluI AGCT 2 cut(s) 499, 732
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 2 cut(s) 794, 816
AlwI GGATC 1 cut(s) 687
Aor13HI TCCGGA 1 cut(s) 742
AoxI GGCC 3 cut(s) 148, 175, 481
ApeKI GCWGC 2 cut(s) 189, 857
ArsI GACNNNNNNTTYG 2 cut(s) 392, 424
AscI GGCGCGCC 1 cut(s) 195
AspLEI GCGC 3 cut(s) 197, 199, 893
AspS9I GGNCC 2 cut(s) 149, 698
AsuHPI GGTGA 3 cut(s) 73, 235, 826
AvaII GGWCC 1 cut(s) 698
BbsI GAAGAC 1 cut(s) 400
Bbv12I GWGCWC 1 cut(s) 769
BbvCI CCTCAGC 1 cut(s) 89
BbvI GCAGC 2 cut(s) 176, 844
BccI CCATC 3 cut(s) 161, 259, 341
BceAI ACGGC 3 cut(s) 202, 577, 888
BciVI GTATCC 1 cut(s) 739
BcoDI GTCTC 2 cut(s) 794, 816
BfaI CTAG 2 cut(s) 663, 846
BfmI CTRYAG 1 cut(s) 858
BfuAI ACCTGC 2 cut(s) 152, 335
BfuI GTATCC 1 cut(s) 739
BisI GCNGC 6 cut(s) 136, 148, 190, 193, 200, 858
BlsI GCNGC 6 cut(s) 137, 149, 191, 194, 201, 859
BmcAI AGTACT 2 cut(s) 568, 577
Bme18I GGWCC 1 cut(s) 698
BmgT120I GGNCC 2 cut(s) 149, 698
BmiI GGNNCC 4 cut(s) 56, 151, 699, 741
BmrI ACTGGG 1 cut(s) 759
BmuI ACTGGG 1 cut(s) 759
BpiI GAAGAC 1 cut(s) 400
BplI GAGNNNNNCTC 4 cut(s) 46, 78, 751, 783
Bpu10I CCTNAGC 1 cut(s) 89
BpuEI CTTGAG 1 cut(s) 789
BsaBI GATNNNNATC 1 cut(s) 960
BsaJI CCNNGG 2 cut(s) 208, 396
BsaWI WCCGGW 2 cut(s) 742, 773
Bsc4I CCNNNNNNNGG 2 cut(s) 522, 749
Bse1I ACTGG 4 cut(s) 271, 373, 574, 754
Bse3DI GCAATG 1 cut(s) 886
Bse8I GATNNNNATC 1 cut(s) 960
BseAI TCCGGA 1 cut(s) 742
BseDI CCNNGG 2 cut(s) 208, 396
BseGI GGATG 3 cut(s) 153, 251, 333
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 2 cut(s) 522, 749
BseMI GCAATG 1 cut(s) 886
BseMII CTCAG 4 cut(s) 77, 103, 782, 789
BseNI ACTGG 4 cut(s) 271, 373, 574, 754
BsePI GCGCGC 1 cut(s) 195
BseRI GAGGAG 4 cut(s) 77, 86, 89, 407
BseXI GCAGC 2 cut(s) 176, 844
Bsh1236I CGCG 3 cut(s) 197, 518, 899
BshFI GGCC 3 cut(s) 150, 177, 483
BsiHKAI GWGCWC 1 cut(s) 769
BsiSI CCGG 4 cut(s) 255, 480, 743, 774
BslFI GGGAC 4 cut(s) 445, 571, 711, 793
BslI CCNNNNNNNGG 2 cut(s) 522, 749
BsmAI GTCTC 2 cut(s) 794, 816
BsmFI GGGAC 4 cut(s) 445, 571, 711, 793
BsmI GAATGC 1 cut(s) 914
BsnI GGCC 3 cut(s) 150, 177, 483
Bsp1286I GDGCHC 1 cut(s) 769
Bsp13I TCCGGA 1 cut(s) 742
Bsp143I GATC 1 cut(s) 679
BspANI GGCC 3 cut(s) 150, 177, 483
BspCNI CTCAG 4 cut(s) 76, 102, 781, 790
BspEI TCCGGA 1 cut(s) 742
BspFNI CGCG 3 cut(s) 197, 518, 899
BspHI TCATGA 1 cut(s) 627
BspLI GGNNCC 4 cut(s) 56, 151, 699, 741
BspMAI CTGCAG 1 cut(s) 862
BspMI ACCTGC 2 cut(s) 152, 335
BspPI GGATC 1 cut(s) 687
BsrDI GCAATG 1 cut(s) 886
BsrI ACTGG 4 cut(s) 271, 373, 574, 754
BssECI CCNNGG 2 cut(s) 208, 396
BssHII GCGCGC 1 cut(s) 195
BssMI GATC 1 cut(s) 679
Bst4CI ACNGT 4 cut(s) 16, 406, 619, 702
Bst6I CTCTTC 1 cut(s) 242
BstAPI GCANNNNNTGC 1 cut(s) 144
BstC8I GCNNGC 3 cut(s) 197, 215, 862
BstDEI CTNAG 4 cut(s) 63, 89, 768, 798
BstDSI CCRYGG 1 cut(s) 208
BstF5I GGATG 3 cut(s) 153, 251, 333
BstFNI CGCG 3 cut(s) 197, 518, 899
BstHHI GCGC 3 cut(s) 197, 199, 893
BstKTI GATC 1 cut(s) 682
BstMAI GTCTC 2 cut(s) 794, 816
BstMBI GATC 1 cut(s) 679
BstMWI GCNNNNNNNGC 2 cut(s) 144, 489
BstNSI RCATGY 1 cut(s) 217
BstSFI CTRYAG 1 cut(s) 858
BstUI CGCG 3 cut(s) 197, 518, 899
BstV1I GCAGC 2 cut(s) 176, 844
BstV2I GAAGAC 1 cut(s) 400
BsuI GTATCC 1 cut(s) 739
BsuRI GGCC 3 cut(s) 150, 177, 483
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 3 cut(s) 153, 251, 333
BtsI GCAGTG 1 cut(s) 871
BtsIMutI CAGTG 1 cut(s) 871
BveI ACCTGC 2 cut(s) 152, 335
Cac8I GCNNGC 3 cut(s) 197, 215, 862
CciI TCATGA 1 cut(s) 627
CfoI GCGC 3 cut(s) 197, 199, 893
Cfr13I GGNCC 2 cut(s) 149, 698
Csp6I GTAC 3 cut(s) 567, 576, 651
CviAII CATG 7 cut(s) 214, 319, 510, 541, 628, 634, 953
CviQI GTAC 3 cut(s) 567, 576, 651
DdeI CTNAG 4 cut(s) 63, 89, 768, 798
DpnI GATC 1 cut(s) 681
DpnII GATC 1 cut(s) 679
DrdI GACNNNNNNGTC 2 cut(s) 440, 808
DseDI GACNNNNNNGTC 2 cut(s) 440, 808
EaeI YGGCCR 1 cut(s) 481
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
EciI GGCGGA 1 cut(s) 579
Eco47I GGWCC 1 cut(s) 698
FaeI CATG 7 cut(s) 217, 322, 513, 544, 631, 637, 956
FalI AAGNNNNNCTT 2 cut(s) 716, 748
FaqI GGGAC 4 cut(s) 445, 571, 711, 793
FatI CATG 7 cut(s) 213, 318, 509, 540, 627, 633, 952
FauI CCCGC 3 cut(s) 121, 322, 904
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 6 cut(s) 136, 148, 190, 193, 200, 858
FokI GGATG 3 cut(s) 140, 238, 320
Fsp4HI GCNGC 6 cut(s) 136, 148, 190, 193, 200, 858
FspBI CTAG 2 cut(s) 663, 846
GlaI GCGC 3 cut(s) 196, 198, 892
GluI GCNGC 6 cut(s) 136, 148, 190, 193, 200, 858
HaeIII GGCC 3 cut(s) 150, 177, 483
HapII CCGG 4 cut(s) 255, 480, 743, 774
HhaI GCGC 3 cut(s) 197, 199, 893
Hin1II CATG 7 cut(s) 217, 322, 513, 544, 631, 637, 956
Hin6I GCGC 3 cut(s) 195, 197, 891
HinP1I GCGC 3 cut(s) 195, 197, 891
HincII GTYRAC 2 cut(s) 324, 433
HindII GTYRAC 2 cut(s) 324, 433
HinfI GANTC 3 cut(s) 75, 434, 802
HpaII CCGG 4 cut(s) 255, 480, 743, 774
HphI GGTGA 3 cut(s) 73, 235, 826
Hpy166II GTNNAC 4 cut(s) 163, 307, 324, 433
Hpy188I TCNGA 1 cut(s) 400
Hpy188III TCNNGA 3 cut(s) 361, 628, 743
Hpy8I GTNNAC 4 cut(s) 163, 307, 324, 433
Hpy99I CGWCG 5 cut(s) 185, 188, 305, 434, 497
HpyAV CCTTC 2 cut(s) 181, 872
HpyCH4III ACNGT 4 cut(s) 16, 406, 619, 702
HpyCH4V TGCA 3 cut(s) 513, 860, 952
HpyF10VI GCNNNNNNNGC 2 cut(s) 144, 489
HpyF3I CTNAG 4 cut(s) 63, 89, 768, 798
Hsp92II CATG 7 cut(s) 217, 322, 513, 544, 631, 637, 956
HspAI GCGC 3 cut(s) 195, 197, 891
Kpn2I TCCGGA 1 cut(s) 742
Kzo9I GATC 1 cut(s) 679
LmnI GCTCC 5 cut(s) 54, 230, 335, 431, 898
Lsp1109I GCAGC 2 cut(s) 176, 844
MaeI CTAG 2 cut(s) 663, 846
MaeIII GTNAC 2 cut(s) 16, 667
MalI GATC 1 cut(s) 681
MboI GATC 1 cut(s) 679
MboII GAAGA 4 cut(s) 25, 229, 232, 400
MfeI CAATTG 1 cut(s) 6
MhlI GDGCHC 1 cut(s) 769
MluCI AATT 4 cut(s) 6, 22, 580, 838
MlyI GAGTC 3 cut(s) 69, 428, 796
MmeI TCCRAC 2 cut(s) 364, 684
MroI TCCGGA 1 cut(s) 742
MseI TTAA 3 cut(s) 548, 723, 941
MslI CAYNNNNRTG 1 cut(s) 632
MspI CCGG 4 cut(s) 255, 480, 743, 774
MunI CAATTG 1 cut(s) 6
Mva1269I GAATGC 1 cut(s) 914
MvnI CGCG 3 cut(s) 197, 518, 899
MwoI GCNNNNNNNGC 2 cut(s) 144, 489
NdeII GATC 1 cut(s) 679
NlaIII CATG 7 cut(s) 217, 322, 513, 544, 631, 637, 956
NlaIV GGNNCC 4 cut(s) 56, 151, 699, 741
NmuCI GTSAC 1 cut(s) 667
NspI RCATGY 1 cut(s) 217
PaeI GCATGC 1 cut(s) 217
PagI TCATGA 1 cut(s) 627
PalAI GGCGCGCC 1 cut(s) 195
PaqCI CACCTGC 1 cut(s) 152
PauI GCGCGC 1 cut(s) 195
PcsI WCGNNNNNNNCGW 2 cut(s) 180, 306
PctI GAATGC 1 cut(s) 914
PflFI GACNNNGTC 1 cut(s) 404
PkrI GCNGC 6 cut(s) 137, 149, 191, 194, 201, 859
PleI GAGTC 3 cut(s) 69, 428, 796
PpsI GAGTC 3 cut(s) 69, 428, 796
PspN4I GGNNCC 4 cut(s) 56, 151, 699, 741
PspPI GGNCC 2 cut(s) 149, 698
PstI CTGCAG 1 cut(s) 862
PsyI GACNNNGTC 1 cut(s) 404
PteI GCGCGC 1 cut(s) 195
RsaI GTAC 3 cut(s) 568, 577, 652
RsaNI GTAC 3 cut(s) 567, 576, 651
RseI CAYNNNNRTG 1 cut(s) 632
SalI GTCGAC 1 cut(s) 431
SaqAI TTAA 3 cut(s) 548, 723, 941
SatI GCNGC 6 cut(s) 136, 148, 190, 193, 200, 858
Sau3AI GATC 1 cut(s) 679
Sau96I GGNCC 2 cut(s) 149, 698
ScaI AGTACT 2 cut(s) 568, 577
SchI GAGTC 3 cut(s) 69, 428, 796
SduI GDGCHC 1 cut(s) 769
SetI ASST 8 cut(s) 146, 237, 300, 329, 398, 501, 694, 734
SfcI CTRYAG 1 cut(s) 858
SgsI GGCGCGCC 1 cut(s) 195
SinI GGWCC 1 cut(s) 698
SmiMI CAYNNNNRTG 1 cut(s) 632
SmlI CTYRAG 1 cut(s) 804
SmoI CTYRAG 1 cut(s) 804
SphI GCATGC 1 cut(s) 217
Sse9I AATT 4 cut(s) 6, 22, 580, 838
SspI AATATT 1 cut(s) 640
SspMI CTAG 2 cut(s) 663, 846
TaaI ACNGT 4 cut(s) 16, 406, 619, 702
TaqI TCGA 3 cut(s) 180, 279, 432
TasI AATT 4 cut(s) 6, 22, 580, 838
TatI WGTACW 2 cut(s) 566, 575
TauI GCSGC 4 cut(s) 138, 150, 195, 202
Tru1I TTAA 3 cut(s) 548, 723, 941
Tru9I TTAA 3 cut(s) 548, 723, 941
TscAI CASTG 1 cut(s) 871
TseFI GTSAC 1 cut(s) 667
TseI GCWGC 2 cut(s) 189, 857
Tsp45I GTSAC 1 cut(s) 667
TspDTI ATGAA 2 cut(s) 616, 650
TspGWI ACGGA 3 cut(s) 197, 418, 692
TspRI CASTG 1 cut(s) 871
Tth111I GACNNNGTC 1 cut(s) 404
VpaK11BI GGWCC 1 cut(s) 698
XceI RCATGY 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 432
XspI CTAG 2 cut(s) 663, 846
ZrmI AGTACT 2 cut(s) 568, 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.