Prupe.1G113300_v2.0.a1

ER membrane protein complex subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
9014368 .. 9016181
1814 bp
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UTR
Exon/CDS
Intron
Prupe.1G113300.1

Sequence Viewer

Length: 363 bp
ATGGGTGGACATAATGACTCAAGTGCATCTGAGAAGAAACTGAGCGAGGCTGCAAATGTTGTGCCAACCCTCAATGCTGAGAATTTGCAAAGTAACATGAAAGTTATATATTACAGCCGAACATTTATGTCTATCATCGGTGGGGTCATTGCTGGAATTTTGGGATTCACAGGCCTTACTGGTTTTATCTTTTATTTTCTTGTTATGGCTGTCACTTCAGTTGGACTCATTGCCAAGGCAGGGTTTACAGTTCATTCATATTTTGATAGCTGGAACCAGATTATACTTGATGGCTTTCTTGGTGGGCTTTTGTCATTTGTGCTGTTCTGGACATTTGCTTATGACATTGTGCATATATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.1

Weight (kDa)

5.78

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012102)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 82, 156
AcuI CTGAAG 1 cut(s) 201
AfiI CCNNNNNNNGG 1 cut(s) 240
AluBI AGCT 1 cut(s) 270
AluI AGCT 1 cut(s) 270
AoxI GGCC 1 cut(s) 172
ApeKI GCWGC 1 cut(s) 50
ApoI RAATTY 2 cut(s) 82, 156
BbvI GCAGC 1 cut(s) 37
BccI CCATC 1 cut(s) 284
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
BmiI GGNNCC 1 cut(s) 275
BmsI GCATC 1 cut(s) 35
BpuEI CTTGAG 1 cut(s) 4
BsaJI CCNNGG 1 cut(s) 234
Bsc4I CCNNNNNNNGG 1 cut(s) 240
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 2 cut(s) 147, 228
BseDI CCNNGG 1 cut(s) 234
BseLI CCNNNNNNNGG 1 cut(s) 240
BseMI GCAATG 2 cut(s) 147, 228
BseMII CTCAG 3 cut(s) 21, 32, 69
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 1 cut(s) 37
BshFI GGCC 1 cut(s) 174
BslI CCNNNNNNNGG 1 cut(s) 240
BsnI GGCC 1 cut(s) 174
BspANI GGCC 1 cut(s) 174
BspCNI CTCAG 3 cut(s) 22, 33, 70
BspLI GGNNCC 1 cut(s) 275
BsrDI GCAATG 2 cut(s) 147, 228
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 234
BssT1I CCWWGG 1 cut(s) 234
Bst4CI ACNGT 1 cut(s) 250
BstDEI CTNAG 3 cut(s) 30, 41, 78
BstV1I GCAGC 1 cut(s) 37
BsuRI GGCC 1 cut(s) 174
CviAII CATG 1 cut(s) 97
CviJI RGCY 7 cut(s) 50, 117, 174, 209, 270, 294, 307
CviKI_1 RGCY 7 cut(s) 50, 117, 174, 209, 270, 294, 307
DdeI CTNAG 3 cut(s) 30, 41, 78
Eco130I CCWWGG 1 cut(s) 234
Eco147I AGGCCT 1 cut(s) 174
Eco57I CTGAAG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 234
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 1 cut(s) 100
FatI CATG 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 51
HaeIII GGCC 1 cut(s) 174
Hin1II CATG 1 cut(s) 100
HinfI GANTC 3 cut(s) 17, 165, 225
Hpy166II GTNNAC 2 cut(s) 8, 246
Hpy188I TCNGA 2 cut(s) 31, 362
Hpy188III TCNNGA 1 cut(s) 328
Hpy8I GTNNAC 2 cut(s) 8, 246
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4V TGCA 4 cut(s) 26, 53, 88, 352
HpyF3I CTNAG 3 cut(s) 30, 41, 78
Hsp92II CATG 1 cut(s) 100
LpnPI CCDG 7 cut(s) 138, 156, 165, 225, 256, 290, 313
Lsp1109I GCAGC 1 cut(s) 37
LweI GCATC 1 cut(s) 35
MaeIII GTNAC 2 cut(s) 92, 211
MboII GAAGA 1 cut(s) 46
MluCI AATT 2 cut(s) 82, 156
MlyI GAGTC 2 cut(s) 11, 219
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 2 cut(s) 40, 80
NlaIII CATG 1 cut(s) 100
NlaIV GGNNCC 1 cut(s) 275
NmuCI GTSAC 1 cut(s) 211
PceI AGGCCT 1 cut(s) 174
PfeI GAWTC 1 cut(s) 165
PkrI GCNGC 1 cut(s) 52
PleI GAGTC 2 cut(s) 11, 219
PpsI GAGTC 2 cut(s) 11, 219
PspN4I GGNNCC 1 cut(s) 275
SatI GCNGC 1 cut(s) 51
SchI GAGTC 2 cut(s) 11, 219
SetI ASST 1 cut(s) 272
SfaNI GCATC 1 cut(s) 35
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
Sse9I AATT 2 cut(s) 82, 156
SseBI AGGCCT 1 cut(s) 174
StuI AGGCCT 1 cut(s) 174
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 1 cut(s) 250
TasI AATT 2 cut(s) 82, 156
TfiI GAWTC 1 cut(s) 165
TseFI GTSAC 1 cut(s) 211
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 211
TspDTI ATGAA 3 cut(s) 113, 242, 246
XapI RAATTY 2 cut(s) 82, 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.