Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0018526

Physical Location & Seq

Genomic Coordinates Forward (+)

9496652 .. 9497408

Gene Structure 757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G121000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 465 bp

ATGACGAGTCACCAAGTGAAAAATCAGGTGAGAGACACAGTTGAGGAAGGCTTCGACAACCTCCACAGGGTTGCCGACGTCGTGACTTTTCCTTTGGCCCCTCTGGACGGTGCCATTCACGGCACGGCCCGAGGGGTCGTCAACTGGCTCACAGATACCCATCCTGATAGATCCAAGTCCAAGCAAATTCCTAATGGCGCTGGCTACGGTGGCGGACATGGGGGCGGCTATGGCGATGGCGGAAACGGCAGTGGATATGGTGGAAATCCCAACCGCAGAACTTTCAACTTTAAAGGGAATGAGGTTAGCAACAACGAGGGCCCAACTTATGGATTTAACAACTTTGGCAACAGGCGTGGTGGCGGCCCCTACAGTGGCGGTTCTGAATTCGGCTTTGAGAACAATAAACTGAACGGGAACAAGGGCCACACTGAGGGATTTAACGACTTTGCCAACGAATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

155

Amino Acids

16.38

Weight (kDa)

6.28

Isoelectric Point (pI)

16.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018526)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G121000_v2.0.a1 Prupe.1G121100_v2.0.a1 Prupe.1G121200_v2.0.a1 Prupe.1G121300_v2.0.a1 Prupe.1G498300_v2.0.a1 Prupe.1G498400_v2.0.a1 Prupe.1G498600_v2.0.a1 Prupe.1G498700_v2.0.a1 Prupe.1G498800_v2.0.a1 Prupe.1G498900_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	81
AccB1I	GGYRCC	1 cut(s)	110
AccB7I	CCANNNNNTGG	1 cut(s)	329
AciI	CCGC	6 cut(s)	213, 225, 240, 274, 363, 378
AclWI	GGATC	1 cut(s)	165
AcsI	RAATTY	2 cut(s)	186, 386
AcyI	GRCGYC	1 cut(s)	78
AdeI	CACNNNGTG	1 cut(s)	16
AfiI	CCNNNNNNNGG	5 cut(s)	67, 107, 329, 374, 433
AgsI	TTSAA	1 cut(s)	286
Alw26I	GTCTC	1 cut(s)	27
AlwI	GGATC	1 cut(s)	165
Ama87I	CYCGRG	1 cut(s)	129
AoxI	GGCC	5 cut(s)	96, 126, 319, 364, 424
ApaI	GGGCCC	1 cut(s)	323
ApoI	RAATTY	2 cut(s)	186, 386
ArsI	GACNNNNNNTTYG	2 cut(s)	76, 108
AspLEI	GCGC	1 cut(s)	200
AspS9I	GGNCC	6 cut(s)	97, 127, 319, 320, 365, 424
AsuHPI	GGTGA	1 cut(s)	40
AvaI	CYCGRG	1 cut(s)	129
BaeGI	GKGCMC	1 cut(s)	323
BanI	GGYRCC	1 cut(s)	110
BanII	GRGCYC	1 cut(s)	323
BccI	CCATC	2 cut(s)	168, 230
BceAI	ACGGC	3 cut(s)	136, 141, 262
BcoDI	GTCTC	1 cut(s)	27
BfmI	CTRYAG	1 cut(s)	370
BfoI	RGCGCY	1 cut(s)	201
BisI	GCNGC	2 cut(s)	226, 364
BlsI	GCNGC	2 cut(s)	227, 365
BmeT110I	CYCGRG	1 cut(s)	129
BmgT120I	GGNCC	6 cut(s)	97, 127, 319, 320, 365, 424
BmiI	GGNNCC	4 cut(s)	99, 112, 321, 367
BsaBI	GATNNNNATC	1 cut(s)	159
BsaHI	GRCGYC	1 cut(s)	78
BsaJI	CCNNGG	1 cut(s)	130
Bsc4I	CCNNNNNNNGG	5 cut(s)	67, 107, 329, 374, 433
Bse1I	ACTGG	1 cut(s)	149
Bse8I	GATNNNNATC	1 cut(s)	159
BseDI	CCNNGG	1 cut(s)	130
BseGI	GGATG	1 cut(s)	160
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	5 cut(s)	67, 107, 329, 374, 433
BseMII	CTCAG	1 cut(s)	423
BseNI	ACTGG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	323
BshFI	GGCC	5 cut(s)	98, 128, 321, 366, 426
BshNI	GGYRCC	1 cut(s)	110
BsiHKCI	CYCGRG	1 cut(s)	129
BslI	CCNNNNNNNGG	5 cut(s)	67, 107, 329, 374, 433
BsmAI	GTCTC	1 cut(s)	27
BsnI	GGCC	5 cut(s)	98, 128, 321, 366, 426
BsoBI	CYCGRG	1 cut(s)	129
Bsp120I	GGGCCC	1 cut(s)	319
Bsp1286I	GDGCHC	1 cut(s)	323
Bsp143I	GATC	1 cut(s)	170
BspACI	CCGC	6 cut(s)	213, 225, 240, 274, 363, 378
BspANI	GGCC	5 cut(s)	98, 128, 321, 366, 426
BspCNI	CTCAG	1 cut(s)	424
BspLI	GGNNCC	4 cut(s)	99, 112, 321, 367
BspPI	GGATC	1 cut(s)	165
BspT107I	GGYRCC	1 cut(s)	110
BsrI	ACTGG	1 cut(s)	149
BssECI	CCNNGG	1 cut(s)	130
BssMI	GATC	1 cut(s)	170
BssNI	GRCGYC	1 cut(s)	78
Bst4CI	ACNGT	4 cut(s)	40, 110, 209, 374
BstACI	GRCGYC	1 cut(s)	78
BstC8I	GCNNGC	1 cut(s)	202
BstDEI	CTNAG	1 cut(s)	432
BstF5I	GGATG	1 cut(s)	160
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	1 cut(s)	200
BstKTI	GATC	1 cut(s)	173
BstMAI	GTCTC	1 cut(s)	27
BstMBI	GATC	1 cut(s)	170
BstMWI	GCNNNNNNNGC	3 cut(s)	210, 231, 246
BstSFI	CTRYAG	1 cut(s)	370
BstSLI	GKGCMC	1 cut(s)	323
BstX2I	RGATCY	1 cut(s)	170
BstYI	RGATCY	1 cut(s)	170
BsuRI	GGCC	5 cut(s)	98, 128, 321, 366, 426
BtgZI	GCGATG	1 cut(s)	249
BtsCI	GGATG	1 cut(s)	160
BtsI	GCAGTG	1 cut(s)	256
BtsIMutI	CAGTG	3 cut(s)	256, 379, 429
Cac8I	GCNNGC	1 cut(s)	202
CfoI	GCGC	1 cut(s)	200
Cfr13I	GGNCC	6 cut(s)	97, 127, 319, 320, 365, 424
CspCI	CAANNNNNGTGG	2 cut(s)	337, 372
CviAII	CATG	1 cut(s)	218
DdeI	CTNAG	1 cut(s)	432
DpnI	GATC	1 cut(s)	172
DpnII	GATC	1 cut(s)	170
DraI	TTTAAA	1 cut(s)	292
DraIII	CACNNNGTG	1 cut(s)	16
EciI	GGCGGA	2 cut(s)	228, 255
Eco24I	GRGCYC	1 cut(s)	323
Eco88I	CYCGRG	1 cut(s)	129
EcoO109I	RGGNCCY	1 cut(s)	319
EcoRI	GAATTC	1 cut(s)	386
EcoT38I	GRGCYC	1 cut(s)	323
FaeI	CATG	1 cut(s)	221
FaiI	YATR	4 cut(s)	219, 231, 258, 330
FatI	CATG	1 cut(s)	217
Fnu4HI	GCNGC	2 cut(s)	226, 364
FokI	GGATG	1 cut(s)	147
FriOI	GRGCYC	1 cut(s)	323
Fsp4HI	GCNGC	2 cut(s)	226, 364
GlaI	GCGC	1 cut(s)	199
GluI	GCNGC	2 cut(s)	226, 364
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	5 cut(s)	98, 128, 321, 366, 426
HhaI	GCGC	1 cut(s)	200
Hin1I	GRCGYC	1 cut(s)	78
Hin1II	CATG	1 cut(s)	221
Hin6I	GCGC	1 cut(s)	198
HinP1I	GCGC	1 cut(s)	198
HincII	GTYRAC	1 cut(s)	142
HindII	GTYRAC	1 cut(s)	142
HinfI	GANTC	1 cut(s)	7
HphI	GGTGA	1 cut(s)	40
Hpy166II	GTNNAC	1 cut(s)	142
Hpy188I	TCNGA	1 cut(s)	385
Hpy188III	TCNNGA	3 cut(s)	82, 104, 164
Hpy8I	GTNNAC	1 cut(s)	142
Hpy99I	CGWCG	2 cut(s)	80, 83
HpyAV	CCTTC	1 cut(s)	41
HpyCH4III	ACNGT	4 cut(s)	40, 110, 209, 374
HpyCH4IV	ACGT	1 cut(s)	78
HpyF10VI	GCNNNNNNNGC	3 cut(s)	210, 231, 246
HpyF3I	CTNAG	1 cut(s)	432
HpySE526I	ACGT	1 cut(s)	78
Hsp92I	GRCGYC	1 cut(s)	78
Hsp92II	CATG	1 cut(s)	221
HspAI	GCGC	1 cut(s)	198
Kzo9I	GATC	1 cut(s)	170
LpnPI	CCDG	7 cut(s)	11, 52, 89, 130, 177, 186, 337
MaeII	ACGT	1 cut(s)	78
MaeIII	GTNAC	2 cut(s)	8, 82
MalI	GATC	1 cut(s)	172
MboI	GATC	1 cut(s)	170
MflI	RGATCY	1 cut(s)	170
MhlI	GDGCHC	1 cut(s)	323
MluCI	AATT	2 cut(s)	186, 386
MlyI	GAGTC	1 cut(s)	16
MnlI	CCTC	7 cut(s)	37, 71, 111, 125, 295, 310, 427
MseI	TTAA	3 cut(s)	291, 336, 441
MwoI	GCNNNNNNNGC	3 cut(s)	210, 231, 246
NdeII	GATC	1 cut(s)	170
NlaIII	CATG	1 cut(s)	221
NlaIV	GGNNCC	4 cut(s)	99, 112, 321, 367
NmuCI	GTSAC	2 cut(s)	8, 82
PflMI	CCANNNNNTGG	1 cut(s)	329
PkrI	GCNGC	2 cut(s)	227, 365
PleI	GAGTC	1 cut(s)	15
PpsI	GAGTC	1 cut(s)	15
PspN4I	GGNNCC	4 cut(s)	99, 112, 321, 367
PspOMI	GGGCCC	1 cut(s)	319
PspPI	GGNCC	6 cut(s)	97, 127, 319, 320, 365, 424
PsuI	RGATCY	1 cut(s)	170
SaqAI	TTAA	3 cut(s)	291, 336, 441
SatI	GCNGC	2 cut(s)	226, 364
Sau3AI	GATC	1 cut(s)	170
Sau96I	GGNCC	6 cut(s)	97, 127, 319, 320, 365, 424
SchI	GAGTC	1 cut(s)	16
SduI	GDGCHC	1 cut(s)	323
SetI	ASST	4 cut(s)	30, 63, 81, 306
SfcI	CTRYAG	1 cut(s)	370
Sse9I	AATT	2 cut(s)	186, 386
SsiI	CCGC	6 cut(s)	213, 225, 240, 274, 363, 378
TaaI	ACNGT	4 cut(s)	40, 110, 209, 374
TaiI	ACGT	1 cut(s)	81
TaqI	TCGA	1 cut(s)	54
TasI	AATT	2 cut(s)	186, 386
TauI	GCSGC	2 cut(s)	228, 366
Tru1I	TTAA	3 cut(s)	291, 336, 441
Tru9I	TTAA	3 cut(s)	291, 336, 441
TscAI	CASTG	3 cut(s)	256, 379, 436
TseFI	GTSAC	2 cut(s)	8, 82
Tsp45I	GTSAC	2 cut(s)	8, 82
TspRI	CASTG	3 cut(s)	256, 379, 436
Van91I	CCANNNNNTGG	1 cut(s)	329
XapI	RAATTY	2 cut(s)	186, 386
ZraI	GACGTC	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.