Ubiquitin-like-specific protease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G15880 AT4G15880 |
| fragaria_vesca | FvH4_4g18241 FvH4_4g18241 FvH4_4g18241 |
| malus_domestica | MD13G1167800.v1.1 MD16G1167200.v1.1 |
| prunus_persica | Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1 |
| pyrus_communis | pycom13g14350 pycom16g14120 |
| rosa_chinensis | RchiOBHm_Chr4g0422391 |
| rosa_laevigata | RLG00000007613 |
| rosa_multiflora | Rmu_sc0040163.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00364510 |
| rosa_rugosa | Rorug04G0179800 Rorug04G0179900 |
| rosa_samantha | Rh4AG239200 Rh4AG239600 Rh4BG242800 Rh4CG254200 Rh4DG238300 |
| rosa_wichuraiana | Rw4G020680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1125 |
| AccB1I | GGYRCC | 1 cut(s) | 676 |
| AccBSI | CCGCTC | 2 cut(s) | 301, 1541 |
| AccI | GTMKAC | 1 cut(s) | 1008 |
| AciI | CCGC | 4 cut(s) | 197, 301, 724, 1541 |
| AclWI | GGATC | 2 cut(s) | 1476, 1519 |
| AcsI | RAATTY | 5 cut(s) | 52, 82, 90, 236, 1051 |
| AcvI | CACGTG | 1 cut(s) | 977 |
| AfaI | GTAC | 3 cut(s) | 559, 695, 828 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 903, 1137 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 652 |
| AluBI | AGCT | 2 cut(s) | 48, 1159 |
| AluI | AGCT | 2 cut(s) | 48, 1159 |
| Alw21I | GWGCWC | 1 cut(s) | 10 |
| Alw26I | GTCTC | 2 cut(s) | 178, 786 |
| AlwI | GGATC | 2 cut(s) | 1476, 1519 |
| AoxI | GGCC | 3 cut(s) | 137, 494, 610 |
| ApeKI | GCWGC | 2 cut(s) | 796, 958 |
| ApoI | RAATTY | 5 cut(s) | 52, 82, 90, 236, 1051 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1175, 1207 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 462, 1392 |
| AspS9I | GGNCC | 5 cut(s) | 133, 138, 494, 548, 611 |
| AsuC2I | CCSGG | 1 cut(s) | 131 |
| AsuHPI | GGTGA | 2 cut(s) | 412, 962 |
| AsuII | TTCGAA | 1 cut(s) | 853 |
| AvaII | GGWCC | 2 cut(s) | 133, 548 |
| AxyI | CCTNAGG | 1 cut(s) | 552 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1278, 1311 |
| BanI | GGYRCC | 1 cut(s) | 676 |
| BanII | GRGCYC | 1 cut(s) | 272 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1129, 1148, 1161, 1180 |
| BbrPI | CACGTG | 1 cut(s) | 977 |
| BbsI | GAAGAC | 1 cut(s) | 1395 |
| Bbv12I | GWGCWC | 1 cut(s) | 10 |
| BbvCI | CCTCAGC | 1 cut(s) | 870 |
| BbvI | GCAGC | 2 cut(s) | 783, 945 |
| BccI | CCATC | 4 cut(s) | 73, 529, 574, 1208 |
| BciVI | GTATCC | 3 cut(s) | 520, 1157, 1279 |
| BclI | TGATCA | 1 cut(s) | 1434 |
| BcnI | CCSGG | 1 cut(s) | 131 |
| BcoDI | GTCTC | 2 cut(s) | 178, 786 |
| BfmI | CTRYAG | 2 cut(s) | 471, 959 |
| BfuI | GTATCC | 3 cut(s) | 520, 1157, 1279 |
| BisI | GCNGC | 3 cut(s) | 197, 797, 959 |
| BlsI | GCNGC | 3 cut(s) | 198, 798, 960 |
| Bme1390I | CCNGG | 1 cut(s) | 131 |
| Bme18I | GGWCC | 2 cut(s) | 133, 548 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 652 |
| BmgT120I | GGNCC | 5 cut(s) | 133, 138, 494, 548, 611 |
| BmiI | GGNNCC | 1 cut(s) | 678 |
| BmrFI | CCNGG | 1 cut(s) | 131 |
| BpiI | GAAGAC | 1 cut(s) | 1395 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 160, 192, 712, 744 |
| Bpu10I | CCTNAGC | 2 cut(s) | 870, 1398 |
| Bpu14I | TTCGAA | 1 cut(s) | 853 |
| BpuEI | CTTGAG | 1 cut(s) | 728 |
| BpuMI | CCSGG | 1 cut(s) | 131 |
| Bsa29I | ATCGAT | 1 cut(s) | 1176 |
| BsaAI | YACGTR | 1 cut(s) | 977 |
| BsaI | GGTCTC | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 1 cut(s) | 1518 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1397, 1427 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 903, 1137 |
| Bse118I | RCCGGY | 1 cut(s) | 135 |
| Bse1I | ACTGG | 1 cut(s) | 815 |
| Bse21I | CCTNAGG | 1 cut(s) | 552 |
| BseCI | ATCGAT | 1 cut(s) | 1176 |
| BseDI | CCNNGG | 1 cut(s) | 1518 |
| BseGI | GGATG | 2 cut(s) | 418, 1200 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 903, 1137 |
| BseMII | CTCAG | 5 cut(s) | 432, 566, 575, 861, 1389 |
| BseNI | ACTGG | 1 cut(s) | 815 |
| BseRI | GAGGAG | 2 cut(s) | 919, 1262 |
| BseXI | GCAGC | 2 cut(s) | 783, 945 |
| BseYI | CCCAGC | 1 cut(s) | 1159 |
| BsgI | GTGCAG | 3 cut(s) | 42, 536, 651 |
| Bsh1285I | CGRYCG | 1 cut(s) | 305 |
| BshFI | GGCC | 3 cut(s) | 139, 496, 612 |
| BshNI | GGYRCC | 1 cut(s) | 676 |
| BshVI | ATCGAT | 1 cut(s) | 1176 |
| BsiEI | CGRYCG | 1 cut(s) | 305 |
| BsiHKAI | GWGCWC | 1 cut(s) | 10 |
| BsiSI | CCGG | 2 cut(s) | 131, 136 |
| BslFI | GGGAC | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 903, 1137 |
| BsmAI | GTCTC | 2 cut(s) | 178, 786 |
| BsmFI | GGGAC | 1 cut(s) | 47 |
| BsmI | GAATGC | 1 cut(s) | 748 |
| BsnI | GGCC | 3 cut(s) | 139, 496, 612 |
| Bso31I | GGTCTC | 1 cut(s) | 178 |
| Bsp119I | TTCGAA | 1 cut(s) | 853 |
| Bsp1286I | GDGCHC | 2 cut(s) | 10, 272 |
| Bsp1407I | TGTACA | 1 cut(s) | 693 |
| Bsp143I | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| BspACI | CCGC | 4 cut(s) | 197, 301, 724, 1541 |
| BspANI | GGCC | 3 cut(s) | 139, 496, 612 |
| BspCNI | CTCAG | 5 cut(s) | 433, 565, 574, 862, 1390 |
| BspDI | ATCGAT | 1 cut(s) | 1176 |
| BspHI | TCATGA | 3 cut(s) | 289, 922, 1431 |
| BspLI | GGNNCC | 1 cut(s) | 678 |
| BspMAI | CTGCAG | 1 cut(s) | 963 |
| BspPI | GGATC | 2 cut(s) | 1476, 1519 |
| BspQI | GCTCTTC | 2 cut(s) | 347, 855 |
| BspT104I | TTCGAA | 1 cut(s) | 853 |
| BspT107I | GGYRCC | 1 cut(s) | 676 |
| BspTNI | GGTCTC | 1 cut(s) | 178 |
| BsrBI | CCGCTC | 2 cut(s) | 301, 1541 |
| BsrFI | RCCGGY | 1 cut(s) | 135 |
| BsrGI | TGTACA | 1 cut(s) | 693 |
| BsrI | ACTGG | 1 cut(s) | 815 |
| BssAI | RCCGGY | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 1518 |
| BssMI | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| BssT1I | CCWWGG | 1 cut(s) | 1518 |
| Bst4CI | ACNGT | 5 cut(s) | 545, 629, 780, 1260, 1421 |
| Bst6I | CTCTTC | 3 cut(s) | 347, 411, 855 |
| BstAUI | TGTACA | 1 cut(s) | 693 |
| BstBAI | YACGTR | 1 cut(s) | 977 |
| BstBI | TTCGAA | 1 cut(s) | 853 |
| BstC8I | GCNNGC | 1 cut(s) | 882 |
| BstDEI | CTNAG | 6 cut(s) | 441, 552, 561, 870, 968, 1398 |
| BstF5I | GGATG | 2 cut(s) | 418, 1200 |
| BstKTI | GATC | 4 cut(s) | 945, 1437, 1471, 1527 |
| BstMAI | GTCTC | 2 cut(s) | 178, 786 |
| BstMBI | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| BstMCI | CGRYCG | 1 cut(s) | 305 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 793 |
| BstNSI | RCATGY | 1 cut(s) | 1495 |
| BstSCI | CCNGG | 1 cut(s) | 129 |
| BstSFI | CTRYAG | 2 cut(s) | 471, 959 |
| BstV1I | GCAGC | 2 cut(s) | 783, 945 |
| BstV2I | GAAGAC | 1 cut(s) | 1395 |
| BstX2I | RGATCY | 2 cut(s) | 1468, 1524 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 981 |
| BstYI | RGATCY | 2 cut(s) | 1468, 1524 |
| Bsu15I | ATCGAT | 1 cut(s) | 1176 |
| Bsu36I | CCTNAGG | 1 cut(s) | 552 |
| BsuI | GTATCC | 3 cut(s) | 520, 1157, 1279 |
| BsuRI | GGCC | 3 cut(s) | 139, 496, 612 |
| BsuTUI | ATCGAT | 1 cut(s) | 1176 |
| BtsCI | GGATG | 2 cut(s) | 418, 1200 |
| BtsI | GCAGTG | 1 cut(s) | 968 |
| BtsIMutI | CAGTG | 5 cut(s) | 200, 599, 634, 822, 968 |
| Cac8I | GCNNGC | 1 cut(s) | 882 |
| CciI | TCATGA | 3 cut(s) | 289, 922, 1431 |
| Cfr10I | RCCGGY | 1 cut(s) | 135 |
| Cfr13I | GGNCC | 5 cut(s) | 133, 138, 494, 548, 611 |
| ClaI | ATCGAT | 1 cut(s) | 1176 |
| CpoI | CGGWCCG | 1 cut(s) | 133 |
| CseI | GACGC | 2 cut(s) | 148, 788 |
| Csp6I | GTAC | 3 cut(s) | 558, 694, 827 |
| CspI | CGGWCCG | 1 cut(s) | 133 |
| CviAII | CATG | 5 cut(s) | 290, 923, 981, 1432, 1492 |
| CviQI | GTAC | 3 cut(s) | 558, 694, 827 |
| DdeI | CTNAG | 6 cut(s) | 441, 552, 561, 870, 968, 1398 |
| DpnI | GATC | 4 cut(s) | 944, 1436, 1470, 1526 |
| DpnII | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| DriI | GACNNNNNGTC | 1 cut(s) | 652 |
| Eam1104I | CTCTTC | 3 cut(s) | 347, 411, 855 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 652 |
| EarI | CTCTTC | 3 cut(s) | 347, 411, 855 |
| EciI | GGCGGA | 1 cut(s) | 739 |
| Eco130I | CCWWGG | 1 cut(s) | 1518 |
| Eco24I | GRGCYC | 1 cut(s) | 272 |
| Eco31I | GGTCTC | 1 cut(s) | 178 |
| Eco47I | GGWCC | 2 cut(s) | 133, 548 |
| Eco72I | CACGTG | 1 cut(s) | 977 |
| Eco81I | CCTNAGG | 1 cut(s) | 552 |
| EcoO109I | RGGNCCY | 1 cut(s) | 494 |
| EcoRI | GAATTC | 1 cut(s) | 52 |
| EcoT14I | CCWWGG | 1 cut(s) | 1518 |
| EcoT38I | GRGCYC | 1 cut(s) | 272 |
| ErhI | CCWWGG | 1 cut(s) | 1518 |
| FaeI | CATG | 5 cut(s) | 293, 926, 984, 1435, 1495 |
| FaqI | GGGAC | 1 cut(s) | 47 |
| FatI | CATG | 5 cut(s) | 289, 922, 980, 1431, 1491 |
| FbaI | TGATCA | 1 cut(s) | 1434 |
| FblI | GTMKAC | 1 cut(s) | 1008 |
| Fnu4HI | GCNGC | 3 cut(s) | 197, 797, 959 |
| FokI | GGATG | 2 cut(s) | 425, 1187 |
| FriOI | GRGCYC | 1 cut(s) | 272 |
| Fsp4HI | GCNGC | 3 cut(s) | 197, 797, 959 |
| GluI | GCNGC | 3 cut(s) | 197, 797, 959 |
| GsaI | CCCAGC | 1 cut(s) | 1163 |
| HaeIII | GGCC | 3 cut(s) | 139, 496, 612 |
| HapII | CCGG | 2 cut(s) | 131, 136 |
| HgaI | GACGC | 2 cut(s) | 148, 788 |
| Hin1II | CATG | 5 cut(s) | 293, 926, 984, 1435, 1495 |
| HinfI | GANTC | 8 cut(s) | 108, 263, 446, 647, 727, 791, 909, 1268 |
| HpaII | CCGG | 2 cut(s) | 131, 136 |
| HphI | GGTGA | 2 cut(s) | 412, 962 |
| Hpy166II | GTNNAC | 8 cut(s) | 214, 541, 548, 625, 694, 803, 1009, 1143 |
| Hpy188I | TCNGA | 5 cut(s) | 442, 589, 732, 903, 1136 |
| Hpy188III | TCNNGA | 7 cut(s) | 250, 290, 665, 923, 1265, 1397, 1432 |
| Hpy8I | GTNNAC | 8 cut(s) | 214, 541, 548, 625, 694, 803, 1009, 1143 |
| Hpy99I | CGWCG | 1 cut(s) | 164 |
| HpyAV | CCTTC | 8 cut(s) | 289, 485, 507, 814, 1131, 1275, 1327, 1403 |
| HpyCH4III | ACNGT | 5 cut(s) | 545, 629, 780, 1260, 1421 |
| HpyCH4IV | ACGT | 1 cut(s) | 976 |
| HpyCH4V | TGCA | 6 cut(s) | 59, 517, 632, 748, 961, 980 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 793 |
| HpyF3I | CTNAG | 6 cut(s) | 441, 552, 561, 870, 968, 1398 |
| HpySE526I | ACGT | 1 cut(s) | 976 |
| Hsp92II | CATG | 5 cut(s) | 293, 926, 984, 1435, 1495 |
| Ksp22I | TGATCA | 1 cut(s) | 1434 |
| Kzo9I | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| LguI | GCTCTTC | 2 cut(s) | 347, 855 |
| LmnI | GCTCC | 2 cut(s) | 5, 298 |
| Lsp1109I | GCAGC | 2 cut(s) | 783, 945 |
| MaeII | ACGT | 1 cut(s) | 976 |
| MaeIII | GTNAC | 5 cut(s) | 179, 916, 1112, 1181, 1254 |
| MalI | GATC | 4 cut(s) | 944, 1436, 1470, 1526 |
| MbiI | CCGCTC | 2 cut(s) | 301, 1541 |
| MboI | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| MflI | RGATCY | 2 cut(s) | 1468, 1524 |
| MhlI | GDGCHC | 2 cut(s) | 10, 272 |
| MlyI | GAGTC | 3 cut(s) | 641, 721, 918 |
| MmeI | TCCRAC | 1 cut(s) | 624 |
| MroXI | GAANNNNTTC | 2 cut(s) | 462, 1392 |
| MseI | TTAA | 2 cut(s) | 1058, 1236 |
| MslI | CAYNNNNRTG | 1 cut(s) | 979 |
| MspI | CCGG | 2 cut(s) | 131, 136 |
| MspR9I | CCNGG | 1 cut(s) | 131 |
| Mva1269I | GAATGC | 1 cut(s) | 748 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 793 |
| NciI | CCSGG | 1 cut(s) | 131 |
| NdeII | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| NlaIII | CATG | 5 cut(s) | 293, 926, 984, 1435, 1495 |
| NlaIV | GGNNCC | 1 cut(s) | 678 |
| NmeAIII | GCCGAG | 1 cut(s) | 705 |
| NmuCI | GTSAC | 1 cut(s) | 1181 |
| NspI | RCATGY | 1 cut(s) | 1495 |
| NspV | TTCGAA | 1 cut(s) | 853 |
| PagI | TCATGA | 3 cut(s) | 289, 922, 1431 |
| PciSI | GCTCTTC | 2 cut(s) | 347, 855 |
| PctI | GAATGC | 1 cut(s) | 748 |
| PdmI | GAANNNNTTC | 2 cut(s) | 462, 1392 |
| PfeI | GAWTC | 5 cut(s) | 108, 263, 446, 791, 1268 |
| PflFI | GACNNNGTC | 1 cut(s) | 995 |
| PfoI | TCCNGGA | 1 cut(s) | 129 |
| PkrI | GCNGC | 3 cut(s) | 198, 798, 960 |
| PleI | GAGTC | 3 cut(s) | 641, 721, 917 |
| PmaCI | CACGTG | 1 cut(s) | 977 |
| PmlI | CACGTG | 1 cut(s) | 977 |
| PpsI | GAGTC | 3 cut(s) | 641, 721, 917 |
| Ppu21I | YACGTR | 1 cut(s) | 977 |
| PsiI | TTATAA | 1 cut(s) | 1125 |
| PspCI | CACGTG | 1 cut(s) | 977 |
| PspFI | CCCAGC | 1 cut(s) | 1159 |
| PspN4I | GGNNCC | 1 cut(s) | 678 |
| PspPI | GGNCC | 5 cut(s) | 133, 138, 494, 548, 611 |
| PstI | CTGCAG | 1 cut(s) | 963 |
| PsuI | RGATCY | 2 cut(s) | 1468, 1524 |
| PsyI | GACNNNGTC | 1 cut(s) | 995 |
| RsaI | GTAC | 3 cut(s) | 559, 695, 828 |
| RsaNI | GTAC | 3 cut(s) | 558, 694, 827 |
| RseI | CAYNNNNRTG | 1 cut(s) | 979 |
| Rsr2I | CGGWCCG | 1 cut(s) | 133 |
| RsrII | CGGWCCG | 1 cut(s) | 133 |
| SapI | GCTCTTC | 2 cut(s) | 347, 855 |
| SaqAI | TTAA | 2 cut(s) | 1058, 1236 |
| SatI | GCNGC | 3 cut(s) | 197, 797, 959 |
| Sau3AI | GATC | 4 cut(s) | 942, 1434, 1468, 1524 |
| Sau96I | GGNCC | 5 cut(s) | 133, 138, 494, 548, 611 |
| SchI | GAGTC | 3 cut(s) | 641, 721, 918 |
| ScrFI | CCNGG | 1 cut(s) | 131 |
| SduI | GDGCHC | 2 cut(s) | 10, 272 |
| SfcI | CTRYAG | 2 cut(s) | 471, 959 |
| SfuI | TTCGAA | 1 cut(s) | 853 |
| SinI | GGWCC | 2 cut(s) | 133, 548 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 979 |
| SmlI | CTYRAG | 1 cut(s) | 707 |
| SmoI | CTYRAG | 1 cut(s) | 707 |
| SsiI | CCGC | 4 cut(s) | 197, 301, 724, 1541 |
| SspI | AATATT | 1 cut(s) | 1191 |
| StyD4I | CCNGG | 1 cut(s) | 129 |
| StyI | CCWWGG | 1 cut(s) | 1518 |
| TaaI | ACNGT | 5 cut(s) | 545, 629, 780, 1260, 1421 |
| TaiI | ACGT | 1 cut(s) | 979 |
| TaqI | TCGA | 8 cut(s) | 167, 251, 266, 449, 664, 853, 1176, 1504 |
| TaqII | GACCGA | 2 cut(s) | 447, 501 |
| TatI | WGTACW | 1 cut(s) | 693 |
| TauI | GCSGC | 1 cut(s) | 199 |
| TfiI | GAWTC | 5 cut(s) | 108, 263, 446, 791, 1268 |
| Tru1I | TTAA | 2 cut(s) | 1058, 1236 |
| Tru9I | TTAA | 2 cut(s) | 1058, 1236 |
| TscAI | CASTG | 5 cut(s) | 207, 606, 634, 822, 968 |
| TseFI | GTSAC | 1 cut(s) | 1181 |
| TseI | GCWGC | 2 cut(s) | 796, 958 |
| Tsp45I | GTSAC | 1 cut(s) | 1181 |
| TspDTI | ATGAA | 6 cut(s) | 278, 429, 849, 1313, 1341, 1420 |
| TspGWI | ACGGA | 3 cut(s) | 60, 365, 1120 |
| TspRI | CASTG | 5 cut(s) | 207, 606, 634, 822, 968 |
| Tth111I | GACNNNGTC | 1 cut(s) | 995 |
| VpaK11BI | GGWCC | 2 cut(s) | 133, 548 |
| XapI | RAATTY | 5 cut(s) | 52, 82, 90, 236, 1051 |
| XceI | RCATGY | 1 cut(s) | 1495 |
| XmiI | GTMKAC | 1 cut(s) | 1008 |
| XmnI | GAANNNNTTC | 2 cut(s) | 462, 1392 |