Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0007732

Physical Location & Seq

Genomic Coordinates Forward (+)

44536034 .. 44540258

Gene Structure 4225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG238300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGGAGCCTTAGCCAGGAATCGTAAGCGTATAGACGAGTGTCTGAGCTCGAATTCTCCCTTTTCCCCCTATTCTCACATTTCCAAGCGACCCAGAGTATTCTCCTCCTCTTCTTCTTCTTCTTCTCCGACGACGACGACGACCCGACCCGTATTCTCTTCTAACCGCGCCGTCGCCAGGGTCTCCCGCTACCCAGCCGCGCAGCTCCCGTTGCGTCGAATTCACGCGCCTGTTAAGCCCGAAAAGTTCAGCTCCTGCTCCGGCCGAGGGGACCGGTCGGGTGACGTCACCGTCATGGGCAATTTGTTGCGGCGTTACGCCAATGCGAAGAATGAAGCTCTTGCCACGTGTAAGAGTAAGAAAAGGAGGGAGGAGGAGGAGGAGGTGATTCAATTGGATGAGGAGGATGATGATGATCAGAATCGGGTTTCGGAGGATTCGAGCATCGAGGAGGTGGTGGATTTAGGGGAGGATGAGCCGGATGTGCAGGAATTGGAGACCAAGAGGGTGCGATGTGAAGCTCAGGCCACGCAGCCGTCGGCTTCTTCGGTGGCTTCGGACTTCACCACATTGACAGTGAATAATACCTGTTTGAAAGTGGAGAGTTCGGAGCAGGTGAGGGAGCTGCTGGCCCTGAATCCCGAGGATTTGCCCAGTTACAAGAAGTTGATTGAGGAGTTGGATAGGAAGACTACTCCCAAATTGAAACAATTGGGTTTCGAAATCCAGGTGAATGAGAGTAAGCGGGCCCTGTTTGAGTCTTTGCGCCCAAAGAAGAAACCAGTAGAGGAGGCGCCTCGCGAACCTTTTATCCCTCTCAAAGAAGAGGAGAAGGCTGTGGTTGAGCGAGCATTTTCTTATGCGAATCGGAGGAAGGTCCTTGTAACTCATGAGAACTCAAACATACAAATTACTGGTGAACTTTTGCAGTGCCTTAAACCATGTGCATGGTTGAACGATGAGGTCATAAACGTCTACCTTGAGTTGCTGAAGGAGAGGGAAAAGAGAGATCCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACATTTTTCTACAAAAAGTTAATAGGTGGAAGAAGTGGCTATGATTATAAAGCTGTCAGAAGATGGACTACCCAAAAAAAGCTGGGATACAGCCTCATTGACTGCGACAAAATATTCGTCCCAATCCACAAAGAAATACACTGGTGCTTGGCTGTGATTAATAAGAGAGATCAGAAGTTCCAGTATCTTGACTCGCTCGGAGGACGCGATACCAAAGTGATGCAACTATTGGCTAAATACTACGCTGATGAAGTGAAGGAAAAGAGTGGGAAAGACGTTGATGTGAGTTCTTGGGAATTTGAATGTGTCGAAGACCTTCCTGAGCAGGAGAATGGGTTTGATTGTGGCGTATTCATGATCAAGTATGCTGACTTTTACAGTAGGGGATTGGATCTCTGTTTCCACCAGGTAAGGCACATAAAGATGCTCCTGTTGTCTGGCACCCTACATATTTATATGCTTCTGTCTCCCACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009909 GO:0009911 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0030054 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0055044 GO:0065007 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

506

Amino Acids

58.1

Weight (kDa)

8.09

Isoelectric Point (pI)

64.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	317 - 480	1.1e-40	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15880 AT4G15880
fragaria_vesca	FvH4_4g18241 FvH4_4g18241 FvH4_4g18241
malus_domestica	MD13G1167800.v1.1 MD16G1167200.v1.1
prunus_persica	Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1
pyrus_communis	pycom13g14350 pycom16g14120
rosa_chinensis	RchiOBHm_Chr4g0422391
rosa_laevigata	RLG00000007613
rosa_multiflora	Rmu_sc0040163.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364510
rosa_rugosa	Rorug04G0179800 Rorug04G0179900
rosa_samantha	Rh4AG239200 Rh4AG239600 Rh4BG242800 Rh4CG254200 Rh4DG238300
rosa_wichuraiana	Rw4G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1092
AarI	CACCTGC	1 cut(s)	604
AasI	GACNNNNNNGTC	1 cut(s)	290
AatII	GACGTC	1 cut(s)	288
Acc36I	ACCTGC	1 cut(s)	604
AccB1I	GGYRCC	2 cut(s)	793, 1484
AccI	GTMKAC	1 cut(s)	975
AccII	CGCG	5 cut(s)	168, 200, 227, 801, 1251
AciI	CCGC	5 cut(s)	166, 187, 198, 310, 745
AclWI	GGATC	2 cut(s)	1004, 1443
AcoI	YGGCCR	1 cut(s)	262
AcsI	RAATTY	3 cut(s)	52, 219, 1340
AcuI	CTGAAG	1 cut(s)	1010
AcvI	CACGTG	1 cut(s)	348
AcyI	GRCGYC	2 cut(s)	285, 794
AfiI	CCNNNNNNNGG	3 cut(s)	15, 177, 267
AflIII	ACRYGT	1 cut(s)	347
AgeI	ACCGGT	1 cut(s)	273
AgsI	TTSAA	6 cut(s)	392, 595, 706, 955, 1042, 1346
AjnI	CCWGG	4 cut(s)	14, 176, 726, 1449
AloI	GAACNNNNNNTCC	2 cut(s)	795, 827
AluBI	AGCT	8 cut(s)	48, 205, 252, 338, 521, 625, 1097, 1126
AluI	AGCT	8 cut(s)	48, 205, 252, 338, 521, 625, 1097, 1126
Alw21I	GWGCWC	1 cut(s)	50
Alw26I	GTCTC	3 cut(s)	187, 491, 1515
AlwI	GGATC	2 cut(s)	1004, 1443
AlwNI	CAGNNNCTG	1 cut(s)	255
Ama87I	CYCGRG	1 cut(s)	641
AoxI	GGCC	4 cut(s)	262, 525, 630, 747
ApaI	GGGCCC	1 cut(s)	751
ApeKI	GCWGC	3 cut(s)	202, 532, 625
ApoI	RAATTY	3 cut(s)	52, 219, 1340
ArsI	GACNNNNNNTTYG	4 cut(s)	1142, 1146, 1174, 1178
AseI	ATTAAT	1 cut(s)	1203
AsiGI	ACCGGT	1 cut(s)	273
Asp700I	GAANNNNTTC	1 cut(s)	1359
AspLEI	GCGC	5 cut(s)	170, 202, 229, 768, 796
AspS9I	GGNCC	5 cut(s)	271, 631, 747, 748, 877
AsuHPI	GGTGA	7 cut(s)	280, 293, 397, 556, 628, 742, 929
AsuII	TTCGAA	1 cut(s)	720
AvaI	CYCGRG	1 cut(s)	641
AvaII	GGWCC	2 cut(s)	271, 877
BaeGI	GKGCMC	1 cut(s)	751
BaeI	ACNNNNGTAYC	2 cut(s)	1245, 1278
BanI	GGYRCC	2 cut(s)	793, 1484
BanII	GRGCYC	2 cut(s)	50, 751
BarI	GAAGNNNNNNTAC	2 cut(s)	1096, 1128
BbrPI	CACGTG	1 cut(s)	348
BbsI	GAAGAC	2 cut(s)	695, 1362
Bbv12I	GWGCWC	1 cut(s)	50
BbvI	GCAGC	3 cut(s)	214, 544, 612
BccI	CCATC	1 cut(s)	1101
BceAI	ACGGC	2 cut(s)	155, 520
BciT130I	CCWGG	4 cut(s)	16, 178, 728, 1451
BciVI	GTATCC	1 cut(s)	1124
BclI	TGATCA	2 cut(s)	415, 1401
BcoDI	GTCTC	3 cut(s)	187, 491, 1515
BfoI	RGCGCY	1 cut(s)	797
BfuAI	ACCTGC	1 cut(s)	604
BfuI	GTATCC	1 cut(s)	1124
BisI	GCNGC	5 cut(s)	198, 203, 311, 533, 626
BlsI	GCNGC	5 cut(s)	199, 204, 312, 534, 627
Bme1390I	CCNGG	4 cut(s)	16, 178, 728, 1451
Bme18I	GGWCC	2 cut(s)	271, 877
BmeT110I	CYCGRG	1 cut(s)	641
BmgT120I	GGNCC	5 cut(s)	271, 631, 747, 748, 877
BmiI	GGNNCC	5 cut(s)	7, 272, 749, 795, 1486
BmrFI	CCNGG	4 cut(s)	16, 178, 728, 1451
BmrI	ACTGGG	1 cut(s)	648
BmsI	GCATC	3 cut(s)	453, 1254, 1458
BmuI	ACTGGG	1 cut(s)	648
BoxI	GACNNNNGTC	1 cut(s)	39
BpiI	GAAGAC	2 cut(s)	695, 1362
Bpu10I	CCTNAGC	3 cut(s)	10, 522, 1365
Bpu14I	TTCGAA	1 cut(s)	720
BpuEI	CTTGAG	1 cut(s)	1001
BsaAI	YACGTR	2 cut(s)	348, 1518
BsaBI	GATNNNNATC	2 cut(s)	414, 420
BsaHI	GRCGYC	2 cut(s)	285, 794
BsaI	GGTCTC	2 cut(s)	187, 491
BsaJI	CCNNGG	3 cut(s)	177, 265, 642
BsaWI	WCCGGW	1 cut(s)	273
BsaXI	ACNNNNNCTCC	2 cut(s)	1364, 1394
Bsc4I	CCNNNNNNNGG	3 cut(s)	15, 177, 267
Bse118I	RCCGGY	1 cut(s)	273
Bse1I	ACTGG	5 cut(s)	654, 782, 919, 1190, 1225
Bse8I	GATNNNNATC	2 cut(s)	414, 420
BseBI	CCWGG	4 cut(s)	16, 178, 728, 1451
BseDI	CCNNGG	3 cut(s)	177, 265, 642
BseGI	GGATG	4 cut(s)	403, 412, 478, 487
BseJI	GATNNNNATC	2 cut(s)	414, 420
BseLI	CCNNNNNNNGG	3 cut(s)	15, 177, 267
BseMII	CTCAG	3 cut(s)	35, 536, 1356
BseNI	ACTGG	5 cut(s)	654, 782, 919, 1190, 1225
BseSI	GKGCMC	1 cut(s)	751
BseX3I	CGGCCG	1 cut(s)	262
BseXI	GCAGC	3 cut(s)	214, 544, 612
BseYI	CCCAGC	2 cut(s)	193, 1126
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	5 cut(s)	168, 200, 227, 801, 1251
Bsh1285I	CGRYCG	2 cut(s)	265, 278
BshFI	GGCC	4 cut(s)	264, 527, 632, 749
BshNI	GGYRCC	2 cut(s)	793, 1484
BshTI	ACCGGT	1 cut(s)	273
BsiEI	CGRYCG	2 cut(s)	265, 278
BsiHKAI	GWGCWC	1 cut(s)	50
BsiHKCI	CYCGRG	1 cut(s)	641
BsiSI	CCGG	3 cut(s)	261, 274, 479
BslFI	GGGAC	2 cut(s)	284, 1148
BslI	CCNNNNNNNGG	3 cut(s)	15, 177, 267
BsmAI	GTCTC	3 cut(s)	187, 491, 1515
BsmFI	GGGAC	2 cut(s)	284, 1148
BsnI	GGCC	4 cut(s)	264, 527, 632, 749
Bso31I	GGTCTC	2 cut(s)	187, 491
BsoBI	CYCGRG	1 cut(s)	641
Bsp119I	TTCGAA	1 cut(s)	720
Bsp120I	GGGCCC	1 cut(s)	747
Bsp1286I	GDGCHC	2 cut(s)	50, 751
Bsp143I	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
Bsp68I	TCGCGA	1 cut(s)	801
BspACI	CCGC	5 cut(s)	166, 187, 198, 310, 745
BspANI	GGCC	4 cut(s)	264, 527, 632, 749
BspCNI	CTCAG	3 cut(s)	36, 535, 1357
BspFNI	CGCG	5 cut(s)	168, 200, 227, 801, 1251
BspHI	TCATGA	2 cut(s)	889, 1398
BspLI	GGNNCC	5 cut(s)	7, 272, 749, 795, 1486
BspMI	ACCTGC	1 cut(s)	604
BspPI	GGATC	2 cut(s)	1004, 1443
BspT104I	TTCGAA	1 cut(s)	720
BspT107I	GGYRCC	2 cut(s)	793, 1484
BspTNI	GGTCTC	2 cut(s)	187, 491
BsrFI	RCCGGY	1 cut(s)	273
BsrI	ACTGG	5 cut(s)	654, 782, 919, 1190, 1225
BssAI	RCCGGY	1 cut(s)	273
BssECI	CCNNGG	3 cut(s)	177, 265, 642
BssMI	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
BssNI	GRCGYC	2 cut(s)	285, 794
Bst2UI	CCWGG	4 cut(s)	16, 178, 728, 1451
Bst4CI	ACNGT	3 cut(s)	292, 577, 1424
Bst6I	CTCTTC	3 cut(s)	115, 163, 819
BstACI	GRCGYC	2 cut(s)	285, 794
BstBAI	YACGTR	2 cut(s)	348, 1518
BstBI	TTCGAA	1 cut(s)	720
BstC8I	GCNNGC	3 cut(s)	630, 747, 849
BstDEI	CTNAG	4 cut(s)	10, 44, 522, 1365
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	4 cut(s)	403, 412, 478, 487
BstFNI	CGCG	5 cut(s)	168, 200, 227, 801, 1251
BstH2I	RGCGCY	1 cut(s)	797
BstHHI	GCGC	5 cut(s)	170, 202, 229, 768, 796
BstKTI	GATC	5 cut(s)	418, 1012, 1216, 1404, 1438
BstMAI	GTCTC	3 cut(s)	187, 491, 1515
BstMBI	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
BstMCI	CGRYCG	2 cut(s)	265, 278
BstMWI	GCNNNNNNNGC	3 cut(s)	211, 235, 484
BstNI	CCWGG	4 cut(s)	16, 178, 728, 1451
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	4 cut(s)	14, 176, 726, 1449
BstSLI	GKGCMC	1 cut(s)	751
BstUI	CGCG	5 cut(s)	168, 200, 227, 801, 1251
BstV1I	GCAGC	3 cut(s)	214, 544, 612
BstV2I	GAAGAC	2 cut(s)	695, 1362
BstX2I	RGATCY	2 cut(s)	1009, 1435
BstXI	CCANNNNNNTGG	1 cut(s)	948
BstYI	RGATCY	2 cut(s)	1009, 1435
BstZI	CGGCCG	1 cut(s)	262
BsuI	GTATCC	1 cut(s)	1124
BsuRI	GGCC	4 cut(s)	264, 527, 632, 749
BtgZI	GCGATG	1 cut(s)	526
BtsCI	GGATG	4 cut(s)	403, 412, 478, 487
BtsI	GCAGTG	1 cut(s)	935
BtsIMutI	CAGTG	3 cut(s)	582, 935, 1183
BtuMI	TCGCGA	1 cut(s)	801
BveI	ACCTGC	1 cut(s)	604
Cac8I	GCNNGC	3 cut(s)	630, 747, 849
CaiI	CAGNNNCTG	1 cut(s)	255
CciI	TCATGA	2 cut(s)	889, 1398
CfoI	GCGC	5 cut(s)	170, 202, 229, 768, 796
Cfr10I	RCCGGY	1 cut(s)	273
Cfr13I	GGNCC	5 cut(s)	271, 631, 747, 748, 877
CseI	GACGC	2 cut(s)	203, 1257
CsiI	ACCWGGT	1 cut(s)	1449
CspAI	ACCGGT	1 cut(s)	273
CviAII	CATG	5 cut(s)	295, 890, 942, 948, 1399
DdeI	CTNAG	4 cut(s)	10, 44, 522, 1365
DinI	GGCGCC	1 cut(s)	795
DpnI	GATC	5 cut(s)	417, 1011, 1215, 1403, 1437
DpnII	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
DrdI	GACNNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	290
EaeI	YGGCCR	1 cut(s)	262
EagI	CGGCCG	1 cut(s)	262
Eam1104I	CTCTTC	3 cut(s)	115, 163, 819
EarI	CTCTTC	3 cut(s)	115, 163, 819
Ecl136II	GAGCTC	1 cut(s)	48
EclXI	CGGCCG	1 cut(s)	262
Eco24I	GRGCYC	2 cut(s)	50, 751
Eco31I	GGTCTC	2 cut(s)	187, 491
Eco47I	GGWCC	2 cut(s)	271, 877
Eco52I	CGGCCG	1 cut(s)	262
Eco53kI	GAGCTC	1 cut(s)	48
Eco57I	CTGAAG	1 cut(s)	1010
Eco72I	CACGTG	1 cut(s)	348
Eco88I	CYCGRG	1 cut(s)	641
EcoICRI	GAGCTC	1 cut(s)	48
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	748, 877
EcoRI	GAATTC	2 cut(s)	52, 219
EcoRII	CCWGG	4 cut(s)	14, 176, 726, 1449
EcoT38I	GRGCYC	2 cut(s)	50, 751
EgeI	GGCGCC	1 cut(s)	795
EheI	GGCGCC	1 cut(s)	795
FaeI	CATG	5 cut(s)	298, 893, 945, 951, 1402
FaqI	GGGAC	2 cut(s)	284, 1148
FatI	CATG	5 cut(s)	294, 889, 941, 947, 1398
FauI	CCCGC	2 cut(s)	194, 738
FbaI	TGATCA	2 cut(s)	415, 1401
FblI	GTMKAC	1 cut(s)	975
Fnu4HI	GCNGC	5 cut(s)	198, 203, 311, 533, 626
FokI	GGATG	4 cut(s)	410, 419, 485, 494
FriOI	GRGCYC	2 cut(s)	50, 751
Fsp4HI	GCNGC	5 cut(s)	198, 203, 311, 533, 626
GlaI	GCGC	5 cut(s)	169, 201, 228, 767, 795
GluI	GCNGC	5 cut(s)	198, 203, 311, 533, 626
GsaI	CCCAGC	2 cut(s)	197, 1130
HaeII	RGCGCY	1 cut(s)	797
HaeIII	GGCC	4 cut(s)	264, 527, 632, 749
HapII	CCGG	3 cut(s)	261, 274, 479
HgaI	GACGC	2 cut(s)	203, 1257
HhaI	GCGC	5 cut(s)	170, 202, 229, 768, 796
Hin1I	GRCGYC	2 cut(s)	285, 794
Hin1II	CATG	5 cut(s)	298, 893, 945, 951, 1402
Hin6I	GCGC	5 cut(s)	168, 200, 227, 766, 794
HinP1I	GCGC	5 cut(s)	168, 200, 227, 766, 794
HinfI	GANTC	8 cut(s)	19, 388, 421, 437, 637, 758, 865, 1235
HpaII	CCGG	3 cut(s)	261, 274, 479
HphI	GGTGA	7 cut(s)	280, 293, 397, 556, 628, 742, 929
Hpy166II	GTNNAC	2 cut(s)	920, 976
Hpy188III	TCNNGA	6 cut(s)	641, 800, 890, 1232, 1364, 1399
Hpy8I	GTNNAC	2 cut(s)	920, 976
Hpy99I	CGWCG	7 cut(s)	133, 136, 139, 142, 176, 219, 541
HpyAV	CCTTC	5 cut(s)	826, 868, 985, 1294, 1370
HpyCH4III	ACNGT	3 cut(s)	292, 577, 1424
HpyCH4IV	ACGT	5 cut(s)	285, 347, 972, 1320, 1517
HpyCH4V	TGCA	4 cut(s)	487, 928, 947, 1267
HpyF10VI	GCNNNNNNNGC	3 cut(s)	211, 235, 484
HpyF3I	CTNAG	4 cut(s)	10, 44, 522, 1365
HpySE526I	ACGT	5 cut(s)	285, 347, 972, 1320, 1517
Hsp92I	GRCGYC	2 cut(s)	285, 794
Hsp92II	CATG	5 cut(s)	298, 893, 945, 951, 1402
HspAI	GCGC	5 cut(s)	168, 200, 227, 766, 794
KasI	GGCGCC	1 cut(s)	793
Ksp22I	TGATCA	2 cut(s)	415, 1401
Kzo9I	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
LmnI	GCTCC	7 cut(s)	5, 210, 257, 263, 610, 622, 1476
Lsp1109I	GCAGC	3 cut(s)	214, 544, 612
LweI	GCATC	3 cut(s)	453, 1254, 1458
MabI	ACCWGGT	1 cut(s)	1449
MaeII	ACGT	5 cut(s)	285, 347, 972, 1320, 1517
MaeIII	GTNAC	5 cut(s)	281, 286, 314, 656, 883
MalI	GATC	5 cut(s)	417, 1011, 1215, 1403, 1437
MboI	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
MfeI	CAATTG	2 cut(s)	392, 710
MflI	RGATCY	2 cut(s)	1009, 1435
MhlI	GDGCHC	2 cut(s)	50, 751
MluCI	AATT	9 cut(s)	52, 219, 301, 392, 491, 701, 710, 909, 1340
Mly113I	GGCGCC	1 cut(s)	794
MlyI	GAGTC	2 cut(s)	767, 1229
MmeI	TCCRAC	2 cut(s)	152, 660
MroXI	GAANNNNTTC	1 cut(s)	1359
MseI	TTAA	4 cut(s)	234, 936, 1064, 1203
MslI	CAYNNNNRTG	3 cut(s)	293, 946, 1466
MspI	CCGG	3 cut(s)	261, 274, 479
MspR9I	CCNGG	4 cut(s)	16, 178, 728, 1451
MunI	CAATTG	2 cut(s)	392, 710
MvaI	CCWGG	4 cut(s)	16, 178, 728, 1451
MvnI	CGCG	5 cut(s)	168, 200, 227, 801, 1251
MwoI	GCNNNNNNNGC	3 cut(s)	211, 235, 484
NarI	GGCGCC	1 cut(s)	794
NdeII	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
NlaIII	CATG	5 cut(s)	298, 893, 945, 951, 1402
NlaIV	GGNNCC	5 cut(s)	7, 272, 749, 795, 1486
NmeAIII	GCCGAG	1 cut(s)	290
NmuCI	GTSAC	2 cut(s)	281, 286
NruI	TCGCGA	1 cut(s)	801
NspV	TTCGAA	1 cut(s)	720
PagI	TCATGA	2 cut(s)	889, 1398
PaqCI	CACCTGC	1 cut(s)	604
PcsI	WCGNNNNNNNCGW	3 cut(s)	137, 437, 1248
PdmI	GAANNNNTTC	1 cut(s)	1359
PfeI	GAWTC	6 cut(s)	19, 388, 421, 437, 637, 865
PinAI	ACCGGT	1 cut(s)	273
PkrI	GCNGC	5 cut(s)	199, 204, 312, 534, 627
PleI	GAGTC	2 cut(s)	766, 1229
PluTI	GGCGCC	1 cut(s)	797
PmaCI	CACGTG	1 cut(s)	348
PmlI	CACGTG	1 cut(s)	348
PpsI	GAGTC	2 cut(s)	766, 1229
Ppu21I	YACGTR	2 cut(s)	348, 1518
PpuMI	RGGWCCY	1 cut(s)	877
PshAI	GACNNNNGTC	1 cut(s)	39
PshBI	ATTAAT	1 cut(s)	1203
PsiI	TTATAA	1 cut(s)	1092
Psp124BI	GAGCTC	1 cut(s)	50
Psp5II	RGGWCCY	1 cut(s)	877
Psp6I	CCWGG	4 cut(s)	14, 176, 726, 1449
PspCI	CACGTG	1 cut(s)	348
PspFI	CCCAGC	2 cut(s)	193, 1126
PspGI	CCWGG	4 cut(s)	14, 176, 726, 1449
PspN4I	GGNNCC	5 cut(s)	7, 272, 749, 795, 1486
PspOMI	GGGCCC	1 cut(s)	747
PspPI	GGNCC	5 cut(s)	271, 631, 747, 748, 877
PspPPI	RGGWCCY	1 cut(s)	877
PstNI	CAGNNNCTG	1 cut(s)	255
PsuI	RGATCY	2 cut(s)	1009, 1435
RruI	TCGCGA	1 cut(s)	801
RseI	CAYNNNNRTG	3 cut(s)	293, 946, 1466
SacI	GAGCTC	1 cut(s)	50
SaqAI	TTAA	4 cut(s)	234, 936, 1064, 1203
SatI	GCNGC	5 cut(s)	198, 203, 311, 533, 626
Sau3AI	GATC	5 cut(s)	415, 1009, 1213, 1401, 1435
Sau96I	GGNCC	5 cut(s)	271, 631, 747, 748, 877
SchI	GAGTC	2 cut(s)	767, 1229
ScrFI	CCNGG	4 cut(s)	16, 178, 728, 1451
SduI	GDGCHC	2 cut(s)	50, 751
SexAI	ACCWGGT	1 cut(s)	1449
SfaNI	GCATC	3 cut(s)	453, 1254, 1458
SfoI	GGCGCC	1 cut(s)	795
SfuI	TTCGAA	1 cut(s)	720
SinI	GGWCC	2 cut(s)	271, 877
SmiMI	CAYNNNNRTG	3 cut(s)	293, 946, 1466
SmlI	CTYRAG	1 cut(s)	980
SmoI	CTYRAG	1 cut(s)	980
Sse9I	AATT	9 cut(s)	52, 219, 301, 392, 491, 701, 710, 909, 1340
SsiI	CCGC	5 cut(s)	166, 187, 198, 310, 745
SspDI	GGCGCC	1 cut(s)	793
SspI	AATATT	1 cut(s)	1158
SstI	GAGCTC	1 cut(s)	50
StyD4I	CCNGG	4 cut(s)	14, 176, 726, 1449
TaaI	ACNGT	3 cut(s)	292, 577, 1424
TaiI	ACGT	5 cut(s)	288, 350, 975, 1323, 1520
TaqI	TCGA	6 cut(s)	50, 217, 440, 447, 720, 1353
TasI	AATT	9 cut(s)	52, 219, 301, 392, 491, 701, 710, 909, 1340
TauI	GCSGC	2 cut(s)	200, 313
TfiI	GAWTC	6 cut(s)	19, 388, 421, 437, 637, 865
Tru1I	TTAA	4 cut(s)	234, 936, 1064, 1203
Tru9I	TTAA	4 cut(s)	234, 936, 1064, 1203
TscAI	CASTG	3 cut(s)	582, 935, 1190
TseFI	GTSAC	2 cut(s)	281, 286
TseI	GCWGC	3 cut(s)	202, 532, 625
Tsp45I	GTSAC	2 cut(s)	281, 286
TspDTI	ATGAA	3 cut(s)	348, 1308, 1387
TspRI	CASTG	3 cut(s)	582, 935, 1190
VpaK11BI	GGWCC	2 cut(s)	271, 877
VspI	ATTAAT	1 cut(s)	1203
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	3 cut(s)	52, 219, 1340
XmiI	GTMKAC	1 cut(s)	975
XmnI	GAANNNNTTC	1 cut(s)	1359
ZraI	GACGTC	1 cut(s)	286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.