Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0007732

Physical Location & Seq

Genomic Coordinates Forward (+)

50392726 .. 50396923

Gene Structure 4198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG254200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGGGAGCCTTAGCCAGGAATCGTAAGCGTATAGACGAGTGTCTGAGCTCGAATTCTCCCTTTTCCCCCTATTCTCACATTTCCAAGCGACCCAGATTATTCTCCTCCTCTTCTTCTCCGACGACGACCCGACCCGTATTCTCTTCTAACCGCGCCGTCGCCAGGGTCTCCCGCTACCCAGCCGCGCAGCTCCCGTTGCGTCGAATTCACGCGCCTGTTAAGCCCGAAAAGTTCAGCTCCTCCTCCTCCTGCTCCGGCCGAGGGGACCAGTCGGGTGACGTCACCGTCATGGGCAATTTGTTGCGGCGTTACGCCAATGCGAAGAAGGAAGCTCTTGCCACGTGTAAGAGTAAGAAAAGGGAGGAGGAGGTGATTCAATTGGATGAGGAGGAGGATGATGATCAGAATCGGGTTTCGGAGGATTCGAGCATCGAGGAGGTGGTGGATTTAGGGGAGGATGAGCCGGATGTGCAGGAATTGGAGACCAAGAGGGTGCGATGTGAAGCTCAGGCCACGCATCCGTCGGCTTCTTCGGTGGCTTCGGACTTCACCACATTGACAGTGAATAATACCTGTTTGAAAGTGGAGAGTTCGGAGCAGATGAGGGAGCTGCTGGCCCTGAATCCCGAGGATTTGCCGAGTTACAAGAAGTTGATTGAGGAGTTGGATAGGAAGACTACTCCCAAATTGAAACAATTGGGTTTCGAAATCCAGGTGAATGAGAGTAAGCGGGCCCTGTTTGAGTCTTTGCGGCCAAAGAAGAAACCAGTAGAGGAGGCGCCTCGCGAACCTTTTAACCCGCTCAAAGAAGAGGAGAAGGCTGTGGTTGAGCGAGCATTTTCTTATGCGAATCGGAGGAAGGTCCTTGTAACTCATGAGAACTCAAACATACAAATTACTGGTGAACTTTTGCAGTGCCTTAAACCATGTGCATGGTTGAATGATGAGGTCATAAACGTCTACCTTGAGTTGCTGAAGGAGAGGGAAAAGAGAGATCCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACATTTTTCTACAAAAAGTTAATAGGTGGAAGAAGTGGCTATGATTATAAAGCTGTCAGAAGATGGACTACCCAAAAAAAGCTGGGATACAGCCTCATTGACTGCGACAAAATATTCGTCCCAATCCACAAAGAAATACACTGGTGCTTGGCTGTGATTAATAAGAGAGATCAGAAGTTCCAGTATCTTGACTCGCTCGGAGGACGCGATACCAAAGTGATGCAACTATTGGTATGCATTGAAGCATTTGTCTGGCTTTTGATATGTTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009909 GO:0009911 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0030054 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0055044 GO:0065007 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

433

Amino Acids

49.66

Weight (kDa)

8.83

Isoelectric Point (pI)

64.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	312 - 416	6.6e-25	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15880 AT4G15880
fragaria_vesca	FvH4_4g18241 FvH4_4g18241 FvH4_4g18241
malus_domestica	MD13G1167800.v1.1 MD16G1167200.v1.1
prunus_persica	Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1
pyrus_communis	pycom13g14350 pycom16g14120
rosa_chinensis	RchiOBHm_Chr4g0422391
rosa_laevigata	RLG00000007613
rosa_multiflora	Rmu_sc0040163.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364510
rosa_rugosa	Rorug04G0179800 Rorug04G0179900
rosa_samantha	Rh4AG239200 Rh4AG239600 Rh4BG242800 Rh4CG254200 Rh4DG238300
rosa_wichuraiana	Rw4G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1077
AasI	GACNNNNNNGTC	1 cut(s)	284
AatII	GACGTC	1 cut(s)	282
AccB1I	GGYRCC	1 cut(s)	778
AccBSI	CCGCTC	1 cut(s)	802
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	5 cut(s)	153, 185, 212, 786, 1236
AciI	CCGC	7 cut(s)	151, 172, 183, 304, 730, 751, 800
AclWI	GGATC	1 cut(s)	989
AcoI	YGGCCR	2 cut(s)	256, 752
AcsI	RAATTY	2 cut(s)	52, 204
AcuI	CTGAAG	1 cut(s)	995
AcvI	CACGTG	1 cut(s)	342
AcyI	GRCGYC	2 cut(s)	279, 779
AfiI	CCNNNNNNNGG	3 cut(s)	15, 162, 261
AflIII	ACRYGT	1 cut(s)	341
AgsI	TTSAA	6 cut(s)	377, 580, 691, 940, 1027, 1271
AjnI	CCWGG	3 cut(s)	14, 161, 711
AluBI	AGCT	8 cut(s)	48, 190, 237, 332, 506, 610, 1082, 1111
AluI	AGCT	8 cut(s)	48, 190, 237, 332, 506, 610, 1082, 1111
Alw21I	GWGCWC	1 cut(s)	50
Alw26I	GTCTC	2 cut(s)	172, 476
AlwI	GGATC	1 cut(s)	989
Ama87I	CYCGRG	1 cut(s)	626
AoxI	GGCC	5 cut(s)	256, 510, 615, 732, 752
ApaI	GGGCCC	1 cut(s)	736
ApeKI	GCWGC	2 cut(s)	187, 610
ApoI	RAATTY	2 cut(s)	52, 204
ArsI	GACNNNNNNTTYG	4 cut(s)	1127, 1131, 1159, 1163
AseI	ATTAAT	1 cut(s)	1188
AspLEI	GCGC	4 cut(s)	155, 187, 214, 781
AspS9I	GGNCC	5 cut(s)	265, 616, 732, 733, 862
AsuHPI	GGTGA	6 cut(s)	274, 287, 382, 541, 727, 914
AsuII	TTCGAA	1 cut(s)	705
AvaI	CYCGRG	1 cut(s)	626
AvaII	GGWCC	2 cut(s)	265, 862
BaeGI	GKGCMC	1 cut(s)	736
BaeI	ACNNNNGTAYC	2 cut(s)	1230, 1263
BanI	GGYRCC	1 cut(s)	778
BanII	GRGCYC	2 cut(s)	50, 736
BarI	GAAGNNNNNNTAC	2 cut(s)	1081, 1113
BbrPI	CACGTG	1 cut(s)	342
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	1 cut(s)	50
BbvI	GCAGC	2 cut(s)	199, 597
BccI	CCATC	1 cut(s)	1086
BceAI	ACGGC	1 cut(s)	140
BciT130I	CCWGG	3 cut(s)	16, 163, 713
BciVI	GTATCC	1 cut(s)	1109
BclI	TGATCA	1 cut(s)	400
BcoDI	GTCTC	2 cut(s)	172, 476
BfoI	RGCGCY	1 cut(s)	782
BfuI	GTATCC	1 cut(s)	1109
BisI	GCNGC	5 cut(s)	183, 188, 305, 611, 752
BlsI	GCNGC	5 cut(s)	184, 189, 306, 612, 753
Bme1390I	CCNGG	3 cut(s)	16, 163, 713
Bme18I	GGWCC	2 cut(s)	265, 862
BmeT110I	CYCGRG	1 cut(s)	626
BmgT120I	GGNCC	5 cut(s)	265, 616, 732, 733, 862
BmiI	GGNNCC	4 cut(s)	7, 266, 734, 780
BmrFI	CCNGG	3 cut(s)	16, 163, 713
BmsI	GCATC	3 cut(s)	438, 526, 1239
BoxI	GACNNNNGTC	1 cut(s)	39
BpiI	GAAGAC	1 cut(s)	680
Bpu10I	CCTNAGC	2 cut(s)	10, 507
Bpu14I	TTCGAA	1 cut(s)	705
BpuEI	CTTGAG	1 cut(s)	986
BsaAI	YACGTR	1 cut(s)	342
BsaBI	GATNNNNATC	2 cut(s)	399, 405
BsaHI	GRCGYC	2 cut(s)	279, 779
BsaI	GGTCTC	2 cut(s)	172, 476
BsaJI	CCNNGG	3 cut(s)	162, 259, 627
Bsc4I	CCNNNNNNNGG	3 cut(s)	15, 162, 261
Bse1I	ACTGG	5 cut(s)	268, 767, 904, 1175, 1210
Bse8I	GATNNNNATC	2 cut(s)	399, 405
BseBI	CCWGG	3 cut(s)	16, 163, 713
BseDI	CCNNGG	3 cut(s)	162, 259, 627
BseGI	GGATG	5 cut(s)	388, 400, 463, 472, 517
BseJI	GATNNNNATC	2 cut(s)	399, 405
BseLI	CCNNNNNNNGG	3 cut(s)	15, 162, 261
BseMII	CTCAG	2 cut(s)	35, 521
BseNI	ACTGG	5 cut(s)	268, 767, 904, 1175, 1210
BseSI	GKGCMC	1 cut(s)	736
BseX3I	CGGCCG	1 cut(s)	256
BseXI	GCAGC	2 cut(s)	199, 597
BseYI	CCCAGC	2 cut(s)	178, 1111
BsgI	GTGCAG	1 cut(s)	491
Bsh1236I	CGCG	5 cut(s)	153, 185, 212, 786, 1236
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	5 cut(s)	258, 512, 617, 734, 754
BshNI	GGYRCC	1 cut(s)	778
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	1 cut(s)	50
BsiHKCI	CYCGRG	1 cut(s)	626
BsiSI	CCGG	2 cut(s)	255, 464
BslFI	GGGAC	2 cut(s)	278, 1133
BslI	CCNNNNNNNGG	3 cut(s)	15, 162, 261
BsmAI	GTCTC	2 cut(s)	172, 476
BsmFI	GGGAC	2 cut(s)	278, 1133
BsnI	GGCC	5 cut(s)	258, 512, 617, 734, 754
Bso31I	GGTCTC	2 cut(s)	172, 476
BsoBI	CYCGRG	1 cut(s)	626
Bsp119I	TTCGAA	1 cut(s)	705
Bsp120I	GGGCCC	1 cut(s)	732
Bsp1286I	GDGCHC	2 cut(s)	50, 736
Bsp143I	GATC	3 cut(s)	400, 994, 1198
Bsp68I	TCGCGA	1 cut(s)	786
BspACI	CCGC	7 cut(s)	151, 172, 183, 304, 730, 751, 800
BspANI	GGCC	5 cut(s)	258, 512, 617, 734, 754
BspCNI	CTCAG	2 cut(s)	36, 520
BspFNI	CGCG	5 cut(s)	153, 185, 212, 786, 1236
BspHI	TCATGA	1 cut(s)	874
BspLI	GGNNCC	4 cut(s)	7, 266, 734, 780
BspPI	GGATC	1 cut(s)	989
BspT104I	TTCGAA	1 cut(s)	705
BspT107I	GGYRCC	1 cut(s)	778
BspTNI	GGTCTC	2 cut(s)	172, 476
BsrBI	CCGCTC	1 cut(s)	802
BsrI	ACTGG	5 cut(s)	268, 767, 904, 1175, 1210
BssECI	CCNNGG	3 cut(s)	162, 259, 627
BssMI	GATC	3 cut(s)	400, 994, 1198
BssNI	GRCGYC	2 cut(s)	279, 779
Bst2UI	CCWGG	3 cut(s)	16, 163, 713
Bst4CI	ACNGT	2 cut(s)	286, 562
Bst6I	CTCTTC	3 cut(s)	115, 148, 804
BstACI	GRCGYC	2 cut(s)	279, 779
BstBAI	YACGTR	1 cut(s)	342
BstBI	TTCGAA	1 cut(s)	705
BstC8I	GCNNGC	3 cut(s)	615, 732, 834
BstDEI	CTNAG	3 cut(s)	10, 44, 507
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	5 cut(s)	388, 400, 463, 472, 517
BstFNI	CGCG	5 cut(s)	153, 185, 212, 786, 1236
BstH2I	RGCGCY	1 cut(s)	782
BstHHI	GCGC	4 cut(s)	155, 187, 214, 781
BstKTI	GATC	3 cut(s)	403, 997, 1201
BstMAI	GTCTC	2 cut(s)	172, 476
BstMBI	GATC	3 cut(s)	400, 994, 1198
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	3 cut(s)	196, 220, 469
BstNI	CCWGG	3 cut(s)	16, 163, 713
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	3 cut(s)	14, 161, 711
BstSLI	GKGCMC	1 cut(s)	736
BstUI	CGCG	5 cut(s)	153, 185, 212, 786, 1236
BstV1I	GCAGC	2 cut(s)	199, 597
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	1 cut(s)	994
BstXI	CCANNNNNNTGG	1 cut(s)	933
BstYI	RGATCY	1 cut(s)	994
BstZI	CGGCCG	1 cut(s)	256
BsuI	GTATCC	1 cut(s)	1109
BsuRI	GGCC	5 cut(s)	258, 512, 617, 734, 754
BtgZI	GCGATG	1 cut(s)	511
BtsCI	GGATG	5 cut(s)	388, 400, 463, 472, 517
BtsI	GCAGTG	1 cut(s)	920
BtsIMutI	CAGTG	3 cut(s)	567, 920, 1168
BtuMI	TCGCGA	1 cut(s)	786
Cac8I	GCNNGC	3 cut(s)	615, 732, 834
CciI	TCATGA	1 cut(s)	874
CfoI	GCGC	4 cut(s)	155, 187, 214, 781
Cfr13I	GGNCC	5 cut(s)	265, 616, 732, 733, 862
CseI	GACGC	2 cut(s)	188, 1242
CviAII	CATG	4 cut(s)	289, 875, 927, 933
DdeI	CTNAG	3 cut(s)	10, 44, 507
DinI	GGCGCC	1 cut(s)	780
DpnI	GATC	3 cut(s)	402, 996, 1200
DpnII	GATC	3 cut(s)	400, 994, 1198
DrdI	GACNNNNNNGTC	1 cut(s)	284
DseDI	GACNNNNNNGTC	1 cut(s)	284
EaeI	YGGCCR	2 cut(s)	256, 752
EagI	CGGCCG	1 cut(s)	256
Eam1104I	CTCTTC	3 cut(s)	115, 148, 804
EarI	CTCTTC	3 cut(s)	115, 148, 804
Ecl136II	GAGCTC	1 cut(s)	48
EclXI	CGGCCG	1 cut(s)	256
Eco24I	GRGCYC	2 cut(s)	50, 736
Eco31I	GGTCTC	2 cut(s)	172, 476
Eco47I	GGWCC	2 cut(s)	265, 862
Eco52I	CGGCCG	1 cut(s)	256
Eco53kI	GAGCTC	1 cut(s)	48
Eco57I	CTGAAG	1 cut(s)	995
Eco72I	CACGTG	1 cut(s)	342
Eco88I	CYCGRG	1 cut(s)	626
EcoICRI	GAGCTC	1 cut(s)	48
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	733, 862
EcoRI	GAATTC	2 cut(s)	52, 204
EcoRII	CCWGG	3 cut(s)	14, 161, 711
EcoT22I	ATGCAT	1 cut(s)	1268
EcoT38I	GRGCYC	2 cut(s)	50, 736
EgeI	GGCGCC	1 cut(s)	780
EheI	GGCGCC	1 cut(s)	780
FaeI	CATG	4 cut(s)	292, 878, 930, 936
FaqI	GGGAC	2 cut(s)	278, 1133
FatI	CATG	4 cut(s)	288, 874, 926, 932
FauI	CCCGC	3 cut(s)	179, 723, 807
FbaI	TGATCA	1 cut(s)	400
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	5 cut(s)	183, 188, 305, 611, 752
FokI	GGATG	5 cut(s)	395, 407, 470, 479, 504
FriOI	GRGCYC	2 cut(s)	50, 736
Fsp4HI	GCNGC	5 cut(s)	183, 188, 305, 611, 752
GlaI	GCGC	4 cut(s)	154, 186, 213, 780
GluI	GCNGC	5 cut(s)	183, 188, 305, 611, 752
GsaI	CCCAGC	2 cut(s)	182, 1115
HaeII	RGCGCY	1 cut(s)	782
HaeIII	GGCC	5 cut(s)	258, 512, 617, 734, 754
HapII	CCGG	2 cut(s)	255, 464
HgaI	GACGC	2 cut(s)	188, 1242
HhaI	GCGC	4 cut(s)	155, 187, 214, 781
Hin1I	GRCGYC	2 cut(s)	279, 779
Hin1II	CATG	4 cut(s)	292, 878, 930, 936
Hin6I	GCGC	4 cut(s)	153, 185, 212, 779
HinP1I	GCGC	4 cut(s)	153, 185, 212, 779
HinfI	GANTC	8 cut(s)	19, 373, 406, 422, 622, 743, 850, 1220
HpaII	CCGG	2 cut(s)	255, 464
HphI	GGTGA	6 cut(s)	274, 287, 382, 541, 727, 914
Hpy166II	GTNNAC	2 cut(s)	905, 961
Hpy188III	TCNNGA	4 cut(s)	626, 785, 875, 1217
Hpy8I	GTNNAC	2 cut(s)	905, 961
Hpy99I	CGWCG	5 cut(s)	124, 127, 161, 204, 526
HpyAV	CCTTC	4 cut(s)	319, 811, 853, 970
HpyCH4III	ACNGT	2 cut(s)	286, 562
HpyCH4IV	ACGT	3 cut(s)	279, 341, 957
HpyCH4V	TGCA	5 cut(s)	472, 913, 932, 1252, 1266
HpyF10VI	GCNNNNNNNGC	3 cut(s)	196, 220, 469
HpyF3I	CTNAG	3 cut(s)	10, 44, 507
HpySE526I	ACGT	3 cut(s)	279, 341, 957
Hsp92I	GRCGYC	2 cut(s)	279, 779
Hsp92II	CATG	4 cut(s)	292, 878, 930, 936
HspAI	GCGC	4 cut(s)	153, 185, 212, 779
KasI	GGCGCC	1 cut(s)	778
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	3 cut(s)	400, 994, 1198
LmnI	GCTCC	6 cut(s)	5, 195, 242, 257, 595, 607
Lsp1109I	GCAGC	2 cut(s)	199, 597
LweI	GCATC	3 cut(s)	438, 526, 1239
MaeII	ACGT	3 cut(s)	279, 341, 957
MaeIII	GTNAC	5 cut(s)	275, 280, 308, 641, 868
MalI	GATC	3 cut(s)	402, 996, 1200
MbiI	CCGCTC	1 cut(s)	802
MboI	GATC	3 cut(s)	400, 994, 1198
MfeI	CAATTG	2 cut(s)	377, 695
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	2 cut(s)	50, 736
MluCI	AATT	8 cut(s)	52, 204, 295, 377, 476, 686, 695, 894
Mly113I	GGCGCC	1 cut(s)	779
MlyI	GAGTC	2 cut(s)	752, 1214
MmeI	TCCRAC	2 cut(s)	143, 645
Mph1103I	ATGCAT	1 cut(s)	1268
MseI	TTAA	5 cut(s)	219, 795, 921, 1049, 1188
MslI	CAYNNNNRTG	2 cut(s)	287, 931
MspI	CCGG	2 cut(s)	255, 464
MspR9I	CCNGG	3 cut(s)	16, 163, 713
MunI	CAATTG	2 cut(s)	377, 695
MvaI	CCWGG	3 cut(s)	16, 163, 713
MvnI	CGCG	5 cut(s)	153, 185, 212, 786, 1236
MwoI	GCNNNNNNNGC	3 cut(s)	196, 220, 469
NarI	GGCGCC	1 cut(s)	779
NdeII	GATC	3 cut(s)	400, 994, 1198
NlaIII	CATG	4 cut(s)	292, 878, 930, 936
NlaIV	GGNNCC	4 cut(s)	7, 266, 734, 780
NmeAIII	GCCGAG	2 cut(s)	284, 663
NmuCI	GTSAC	2 cut(s)	275, 280
NruI	TCGCGA	1 cut(s)	786
NsiI	ATGCAT	1 cut(s)	1268
NspV	TTCGAA	1 cut(s)	705
PagI	TCATGA	1 cut(s)	874
PcsI	WCGNNNNNNNCGW	2 cut(s)	422, 1233
PfeI	GAWTC	6 cut(s)	19, 373, 406, 422, 622, 850
PkrI	GCNGC	5 cut(s)	184, 189, 306, 612, 753
PleI	GAGTC	2 cut(s)	751, 1214
PluTI	GGCGCC	1 cut(s)	782
PmaCI	CACGTG	1 cut(s)	342
PmlI	CACGTG	1 cut(s)	342
PpsI	GAGTC	2 cut(s)	751, 1214
Ppu21I	YACGTR	1 cut(s)	342
PpuMI	RGGWCCY	1 cut(s)	862
PshAI	GACNNNNGTC	1 cut(s)	39
PshBI	ATTAAT	1 cut(s)	1188
PsiI	TTATAA	1 cut(s)	1077
Psp124BI	GAGCTC	1 cut(s)	50
Psp5II	RGGWCCY	1 cut(s)	862
Psp6I	CCWGG	3 cut(s)	14, 161, 711
PspCI	CACGTG	1 cut(s)	342
PspFI	CCCAGC	2 cut(s)	178, 1111
PspGI	CCWGG	3 cut(s)	14, 161, 711
PspN4I	GGNNCC	4 cut(s)	7, 266, 734, 780
PspOMI	GGGCCC	1 cut(s)	732
PspPI	GGNCC	5 cut(s)	265, 616, 732, 733, 862
PspPPI	RGGWCCY	1 cut(s)	862
PsuI	RGATCY	1 cut(s)	994
RruI	TCGCGA	1 cut(s)	786
RseI	CAYNNNNRTG	2 cut(s)	287, 931
SacI	GAGCTC	1 cut(s)	50
SaqAI	TTAA	5 cut(s)	219, 795, 921, 1049, 1188
SatI	GCNGC	5 cut(s)	183, 188, 305, 611, 752
Sau3AI	GATC	3 cut(s)	400, 994, 1198
Sau96I	GGNCC	5 cut(s)	265, 616, 732, 733, 862
SchI	GAGTC	2 cut(s)	752, 1214
ScrFI	CCNGG	3 cut(s)	16, 163, 713
SduI	GDGCHC	2 cut(s)	50, 736
SfaNI	GCATC	3 cut(s)	438, 526, 1239
SfoI	GGCGCC	1 cut(s)	780
SfuI	TTCGAA	1 cut(s)	705
SinI	GGWCC	2 cut(s)	265, 862
SmiMI	CAYNNNNRTG	2 cut(s)	287, 931
SmlI	CTYRAG	1 cut(s)	965
SmoI	CTYRAG	1 cut(s)	965
Sse9I	AATT	8 cut(s)	52, 204, 295, 377, 476, 686, 695, 894
SsiI	CCGC	7 cut(s)	151, 172, 183, 304, 730, 751, 800
SspDI	GGCGCC	1 cut(s)	778
SspI	AATATT	1 cut(s)	1143
SstI	GAGCTC	1 cut(s)	50
StyD4I	CCNGG	3 cut(s)	14, 161, 711
TaaI	ACNGT	2 cut(s)	286, 562
TaiI	ACGT	3 cut(s)	282, 344, 960
TaqI	TCGA	5 cut(s)	50, 202, 425, 432, 705
TasI	AATT	8 cut(s)	52, 204, 295, 377, 476, 686, 695, 894
TauI	GCSGC	3 cut(s)	185, 307, 754
TfiI	GAWTC	6 cut(s)	19, 373, 406, 422, 622, 850
Tru1I	TTAA	5 cut(s)	219, 795, 921, 1049, 1188
Tru9I	TTAA	5 cut(s)	219, 795, 921, 1049, 1188
TscAI	CASTG	3 cut(s)	567, 920, 1175
TseFI	GTSAC	2 cut(s)	275, 280
TseI	GCWGC	2 cut(s)	187, 610
Tsp45I	GTSAC	2 cut(s)	275, 280
TspGWI	ACGGA	1 cut(s)	510
TspRI	CASTG	3 cut(s)	567, 920, 1175
VpaK11BI	GGWCC	2 cut(s)	265, 862
VspI	ATTAAT	1 cut(s)	1188
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	2 cut(s)	52, 204
XmiI	GTMKAC	1 cut(s)	960
ZraI	GACGTC	1 cut(s)	280
Zsp2I	ATGCAT	1 cut(s)	1268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.