Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007732

Physical Location & Seq

Genomic Coordinates Forward (+)

45701930 .. 45705686

Gene Structure 3757 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00364510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGGAGCCTTAGCCAGGAATCGTAAGCGTATAGACGAGTGTCTGAGCTCGAATTCTCCCTTTTCCCCCTATTCTCACATTTCCAAGCGACCCAGATTATTCTCCTCTTCTTCTTCTTCTTCTTCTCCGACGACCCGACCCGTATTCTCTTCTAACCGCGCCGTCGCCAGGGTCTCCCGCTACCCGGCCGCGCAGCTCCCGTTGCGTCGAATTCACGCGCCTGTTAAGCCCGAAAAGTTCGGCTCCTCCTCCTGCTCCGGCCGAGGGGATCAGTCGGGTGACGTCACCGTCATGGGCAACTTGTTGCGGCGCTACGCCAATGCGAAGCAGGAAGCTCTTGCTACGTGTAAGAGTAAGAAAAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCAGAACCGGGTTTCGGAGGATTCGAGCATTGAGGAGGTGGTGGATTTAGGGGAGGATGAGCCGGATGTGCAGGAATTGGAGACCAAGAGGGTGCGATGTGAAGCTCAGGCCACGCAGCCGTCGGCTTCTTCGGTGGCTTCGGACTTCACCGCATTGACAGTGAATAATACCTTTTCGAAAGTGGAGAGTTCGGAGCAGATGAGGGAGTTGCTGGCCCTGAATCCCGAGGATTTGCCGAGTTACAAGAAGTTGATTGAGGAGTTGGATAGGAAGACTACTCCCAAATTGAAACAATTGGGTTTCGAAATCCAGGTGAATGAGAATAGGCGGGCCCTGTTTGAGTCTTTGCGGCCAAAGAAGAAACCAGTAGAGGAGGCGCCTCATGAACCTTTTACCCCTCTCAAAGAAGAGGAAAAGGCTGTGGTTGAGCGAGCATTTTCTCATGTGAATCGGAGGAAGGTCCTTGTAACTCATGAGAACTCAAACATACAAATTACTGGTGAACTTTTGCAGTGCCTTAAACCAAGTGCATGGTTGAATGATGAGGTCATAAACGTCTACCTTGAGTTGCTGAAGGAGAGGGAAAAGAGAGATCCAAAGAAGTTTCTGAAATGTCATTTTTTCAACACATTTTTCTACAAAAAGTTAATAGGTGGAAGAAGTGGCTATGATTATAAAGCTATATTCGTTCCAATCCACAAAGAAATACACTGGTGCTTGGCTGTGATTAATAAGAGAGATCAGAAGTTCCAGTATCTTGACTCACTCGGAGGACGCGATACCAAAGTGATGCAACTATTGGGTAAATACTACGCTGATGAAGTGAAGGAAAAGAGTGGGAAAGACATTGATGTGAGTTCTTGGGAATTTGAATGTGTCGAAGACCTTCCTGAGCAGGAGAATGGGTTTGATTGTGGCGTATTCATGATCAAGTATGCTGACTTTTACAGTAGGGGATTGGATCTCTGTTTCCACCAGATTAATGACCAATGCCTGCATCCTCTTGACAATGTTGATGCCGCTCACCATGAGAGCTTCAGCTTTTGTTTGCATGATTTTGAGATTTGTCCTTGTGGAGGTGATTCCTGTCAGGACATTGTTAGTAGAGTACAGAGCAAATTGCATATAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006464 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009909 GO:0009911 GO:0009987 GO:0016787 GO:0016926 GO:0016929 GO:0018193 GO:0018205 GO:0019538 GO:0019783 GO:0030054 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0055044 GO:0065007 GO:0070011 GO:0070122 GO:0070137 GO:0070138 GO:0070139 GO:0070140 GO:0070646 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

510

Amino Acids

58.25

Weight (kDa)

5.81

Isoelectric Point (pI)

67.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	311 - 350	1.4e-06	Ulp1 protease family, C-terminal catalytic domain
Peptidase_C48	PF02902	357 - 461	3.1e-24	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15880 AT4G15880
fragaria_vesca	FvH4_4g18241 FvH4_4g18241 FvH4_4g18241
malus_domestica	MD13G1167800.v1.1 MD16G1167200.v1.1
prunus_persica	Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1 Prupe.1G135200_v2.0.a1
pyrus_communis	pycom13g14350 pycom16g14120
rosa_chinensis	RchiOBHm_Chr4g0422391
rosa_laevigata	RLG00000007613
rosa_multiflora	Rmu_sc0040163.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364510
rosa_rugosa	Rorug04G0179800 Rorug04G0179900
rosa_samantha	Rh4AG239200 Rh4AG239600 Rh4BG242800 Rh4CG254200 Rh4DG238300
rosa_wichuraiana	Rw4G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1074
AasI	GACNNNNNNGTC	1 cut(s)	287
AatII	GACGTC	1 cut(s)	285
AccB1I	GGYRCC	1 cut(s)	775
AccBSI	CCGCTC	1 cut(s)	1421
AccI	GTMKAC	1 cut(s)	957
AccII	CGCG	4 cut(s)	159, 191, 218, 1176
AciI	CCGC	8 cut(s)	157, 178, 189, 307, 549, 727, 748, 1419
AclWI	GGATC	4 cut(s)	276, 405, 986, 1368
AcoI	YGGCCR	3 cut(s)	186, 259, 749
AcsI	RAATTY	3 cut(s)	52, 210, 1265
AcuI	CTGAAG	2 cut(s)	992, 1420
AcyI	GRCGYC	2 cut(s)	282, 776
AfaI	GTAC	1 cut(s)	1509
AfiI	CCNNNNNNNGG	6 cut(s)	15, 168, 184, 264, 412, 1475
AflIII	ACRYGT	1 cut(s)	344
AgsI	TTSAA	4 cut(s)	688, 937, 1024, 1271
AjnI	CCWGG	3 cut(s)	14, 167, 708
AluBI	AGCT	7 cut(s)	48, 196, 335, 503, 1079, 1434, 1440
AluI	AGCT	7 cut(s)	48, 196, 335, 503, 1079, 1434, 1440
Alw21I	GWGCWC	1 cut(s)	50
Alw26I	GTCTC	2 cut(s)	178, 473
AlwI	GGATC	4 cut(s)	276, 405, 986, 1368
Ama87I	CYCGRG	1 cut(s)	623
AoxI	GGCC	6 cut(s)	186, 259, 507, 612, 729, 749
ApaI	GGGCCC	1 cut(s)	733
ApeKI	GCWGC	2 cut(s)	193, 514
ApoI	RAATTY	3 cut(s)	52, 210, 1265
AseI	ATTAAT	2 cut(s)	1128, 1380
Asp700I	GAANNNNTTC	1 cut(s)	1284
AspLEI	GCGC	5 cut(s)	161, 193, 220, 312, 778
AspS9I	GGNCC	4 cut(s)	613, 729, 730, 859
AsuC2I	CCSGG	2 cut(s)	185, 407
AsuHPI	GGTGA	7 cut(s)	277, 290, 538, 724, 911, 1415, 1490
AsuII	TTCGAA	2 cut(s)	575, 702
AvaI	CYCGRG	1 cut(s)	623
AvaII	GGWCC	1 cut(s)	859
BaeGI	GKGCMC	1 cut(s)	733
BaeI	ACNNNNGTAYC	2 cut(s)	1170, 1203
BanI	GGYRCC	1 cut(s)	775
BanII	GRGCYC	2 cut(s)	50, 733
BbsI	GAAGAC	2 cut(s)	677, 1287
Bbv12I	GWGCWC	1 cut(s)	50
BbvI	GCAGC	2 cut(s)	205, 526
BceAI	ACGGC	2 cut(s)	146, 502
BciT130I	CCWGG	3 cut(s)	16, 169, 710
BclI	TGATCA	1 cut(s)	1326
BcnI	CCSGG	2 cut(s)	185, 407
BcoDI	GTCTC	2 cut(s)	178, 473
BfaI	CTAG	1 cut(s)	1531
BfoI	RGCGCY	2 cut(s)	313, 779
BisI	GCNGC	6 cut(s)	189, 194, 308, 515, 749, 1419
BlsI	GCNGC	6 cut(s)	190, 195, 309, 516, 750, 1420
Bme1390I	CCNGG	5 cut(s)	16, 169, 185, 407, 710
Bme18I	GGWCC	1 cut(s)	859
BmeT110I	CYCGRG	1 cut(s)	623
BmgT120I	GGNCC	4 cut(s)	613, 729, 730, 859
BmiI	GGNNCC	4 cut(s)	7, 244, 731, 777
BmrFI	CCNGG	5 cut(s)	16, 169, 185, 407, 710
BmsI	GCATC	3 cut(s)	1179, 1405, 1405
BoxI	GACNNNNGTC	1 cut(s)	39
BpiI	GAAGAC	2 cut(s)	677, 1287
Bpu10I	CCTNAGC	3 cut(s)	10, 504, 1290
Bpu14I	TTCGAA	2 cut(s)	575, 702
BpuEI	CTTGAG	1 cut(s)	983
BpuMI	CCSGG	2 cut(s)	185, 407
BsaAI	YACGTR	1 cut(s)	345
BsaHI	GRCGYC	2 cut(s)	282, 776
BsaI	GGTCTC	2 cut(s)	178, 473
BsaJI	CCNNGG	3 cut(s)	168, 262, 624
BsaXI	ACNNNNNCTCC	2 cut(s)	1289, 1319
Bsc4I	CCNNNNNNNGG	6 cut(s)	15, 168, 184, 264, 412, 1475
Bse1I	ACTGG	4 cut(s)	764, 901, 1115, 1150
BseBI	CCWGG	3 cut(s)	16, 169, 710
BseDI	CCNNGG	3 cut(s)	168, 262, 624
BseGI	GGATG	3 cut(s)	460, 469, 1396
BseLI	CCNNNNNNNGG	6 cut(s)	15, 168, 184, 264, 412, 1475
BseMII	CTCAG	3 cut(s)	35, 518, 1281
BseNI	ACTGG	4 cut(s)	764, 901, 1115, 1150
BseSI	GKGCMC	1 cut(s)	733
BseX3I	CGGCCG	2 cut(s)	186, 259
BseXI	GCAGC	2 cut(s)	205, 526
BsgI	GTGCAG	1 cut(s)	488
Bsh1236I	CGCG	4 cut(s)	159, 191, 218, 1176
Bsh1285I	CGRYCG	2 cut(s)	189, 262
BshFI	GGCC	6 cut(s)	188, 261, 509, 614, 731, 751
BshNI	GGYRCC	1 cut(s)	775
BsiEI	CGRYCG	2 cut(s)	189, 262
BsiHKAI	GWGCWC	1 cut(s)	50
BsiHKCI	CYCGRG	1 cut(s)	623
BsiSI	CCGG	4 cut(s)	185, 258, 406, 461
BslI	CCNNNNNNNGG	6 cut(s)	15, 168, 184, 264, 412, 1475
BsmAI	GTCTC	2 cut(s)	178, 473
BsnI	GGCC	6 cut(s)	188, 261, 509, 614, 731, 751
Bso31I	GGTCTC	2 cut(s)	178, 473
BsoBI	CYCGRG	1 cut(s)	623
Bsp119I	TTCGAA	2 cut(s)	575, 702
Bsp120I	GGGCCC	1 cut(s)	729
Bsp1286I	GDGCHC	2 cut(s)	50, 733
Bsp143I	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
BspACI	CCGC	8 cut(s)	157, 178, 189, 307, 549, 727, 748, 1419
BspANI	GGCC	6 cut(s)	188, 261, 509, 614, 731, 751
BspCNI	CTCAG	3 cut(s)	36, 517, 1282
BspFNI	CGCG	4 cut(s)	159, 191, 218, 1176
BspHI	TCATGA	3 cut(s)	781, 871, 1323
BspLI	GGNNCC	4 cut(s)	7, 244, 731, 777
BspPI	GGATC	4 cut(s)	276, 405, 986, 1368
BspT104I	TTCGAA	2 cut(s)	575, 702
BspT107I	GGYRCC	1 cut(s)	775
BspTNI	GGTCTC	2 cut(s)	178, 473
BsrBI	CCGCTC	1 cut(s)	1421
BsrI	ACTGG	4 cut(s)	764, 901, 1115, 1150
BssECI	CCNNGG	3 cut(s)	168, 262, 624
BssMI	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
BssNI	GRCGYC	2 cut(s)	282, 776
Bst2UI	CCWGG	3 cut(s)	16, 169, 710
Bst4CI	ACNGT	3 cut(s)	289, 559, 1349
Bst6I	CTCTTC	3 cut(s)	112, 154, 801
BstACI	GRCGYC	2 cut(s)	282, 776
BstBAI	YACGTR	1 cut(s)	345
BstBI	TTCGAA	2 cut(s)	575, 702
BstC8I	GCNNGC	4 cut(s)	612, 729, 831, 1394
BstDEI	CTNAG	4 cut(s)	10, 44, 504, 1290
BstENI	CCTNNNNNAGG	2 cut(s)	13, 1473
BstF5I	GGATG	3 cut(s)	460, 469, 1396
BstFNI	CGCG	4 cut(s)	159, 191, 218, 1176
BstH2I	RGCGCY	2 cut(s)	313, 779
BstHHI	GCGC	5 cut(s)	161, 193, 220, 312, 778
BstKTI	GATC	6 cut(s)	271, 400, 994, 1141, 1329, 1363
BstMAI	GTCTC	2 cut(s)	178, 473
BstMBI	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
BstMCI	CGRYCG	2 cut(s)	189, 262
BstMWI	GCNNNNNNNGC	3 cut(s)	202, 226, 466
BstNI	CCWGG	3 cut(s)	16, 169, 710
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	5 cut(s)	14, 167, 183, 405, 708
BstSLI	GKGCMC	1 cut(s)	733
BstUI	CGCG	4 cut(s)	159, 191, 218, 1176
BstV1I	GCAGC	2 cut(s)	205, 526
BstV2I	GAAGAC	2 cut(s)	677, 1287
BstX2I	RGATCY	2 cut(s)	991, 1360
BstXI	CCANNNNNNTGG	1 cut(s)	930
BstYI	RGATCY	2 cut(s)	991, 1360
BstZI	CGGCCG	2 cut(s)	186, 259
BsuRI	GGCC	6 cut(s)	188, 261, 509, 614, 731, 751
BtgZI	GCGATG	1 cut(s)	508
BtsCI	GGATG	3 cut(s)	460, 469, 1396
BtsI	GCAGTG	1 cut(s)	917
BtsIMutI	CAGTG	3 cut(s)	564, 917, 1108
Cac8I	GCNNGC	4 cut(s)	612, 729, 831, 1394
CciI	TCATGA	3 cut(s)	781, 871, 1323
CfoI	GCGC	5 cut(s)	161, 193, 220, 312, 778
Cfr13I	GGNCC	4 cut(s)	613, 729, 730, 859
CseI	GACGC	2 cut(s)	194, 1182
Csp6I	GTAC	1 cut(s)	1508
CviAII	CATG	8 cut(s)	292, 782, 842, 872, 930, 1324, 1427, 1451
CviQI	GTAC	1 cut(s)	1508
DdeI	CTNAG	4 cut(s)	10, 44, 504, 1290
DinI	GGCGCC	1 cut(s)	777
DpnI	GATC	6 cut(s)	270, 399, 993, 1140, 1328, 1362
DpnII	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
DrdI	GACNNNNNNGTC	1 cut(s)	287
DseDI	GACNNNNNNGTC	1 cut(s)	287
EaeI	YGGCCR	3 cut(s)	186, 259, 749
EagI	CGGCCG	2 cut(s)	186, 259
Eam1104I	CTCTTC	3 cut(s)	112, 154, 801
EarI	CTCTTC	3 cut(s)	112, 154, 801
Ecl136II	GAGCTC	1 cut(s)	48
EclXI	CGGCCG	2 cut(s)	186, 259
Eco24I	GRGCYC	2 cut(s)	50, 733
Eco31I	GGTCTC	2 cut(s)	178, 473
Eco47I	GGWCC	1 cut(s)	859
Eco52I	CGGCCG	2 cut(s)	186, 259
Eco53kI	GAGCTC	1 cut(s)	48
Eco57I	CTGAAG	2 cut(s)	992, 1420
Eco88I	CYCGRG	1 cut(s)	623
EcoICRI	GAGCTC	1 cut(s)	48
EcoNI	CCTNNNNNAGG	2 cut(s)	13, 1473
EcoO109I	RGGNCCY	2 cut(s)	730, 859
EcoRI	GAATTC	2 cut(s)	52, 210
EcoRII	CCWGG	3 cut(s)	14, 167, 708
EcoT38I	GRGCYC	2 cut(s)	50, 733
EgeI	GGCGCC	1 cut(s)	777
EheI	GGCGCC	1 cut(s)	777
FaeI	CATG	8 cut(s)	295, 785, 845, 875, 933, 1327, 1430, 1454
FatI	CATG	8 cut(s)	291, 781, 841, 871, 929, 1323, 1426, 1450
FauI	CCCGC	2 cut(s)	185, 720
FbaI	TGATCA	1 cut(s)	1326
FblI	GTMKAC	1 cut(s)	957
Fnu4HI	GCNGC	6 cut(s)	189, 194, 308, 515, 749, 1419
FokI	GGATG	3 cut(s)	467, 476, 1383
FriOI	GRGCYC	2 cut(s)	50, 733
Fsp4HI	GCNGC	6 cut(s)	189, 194, 308, 515, 749, 1419
FspBI	CTAG	1 cut(s)	1531
GlaI	GCGC	5 cut(s)	160, 192, 219, 311, 777
GluI	GCNGC	6 cut(s)	189, 194, 308, 515, 749, 1419
HaeII	RGCGCY	2 cut(s)	313, 779
HaeIII	GGCC	6 cut(s)	188, 261, 509, 614, 731, 751
HapII	CCGG	4 cut(s)	185, 258, 406, 461
HgaI	GACGC	2 cut(s)	194, 1182
HhaI	GCGC	5 cut(s)	161, 193, 220, 312, 778
Hin1I	GRCGYC	2 cut(s)	282, 776
Hin1II	CATG	8 cut(s)	295, 785, 845, 875, 933, 1327, 1430, 1454
Hin6I	GCGC	5 cut(s)	159, 191, 218, 310, 776
HinP1I	GCGC	5 cut(s)	159, 191, 218, 310, 776
HinfI	GANTC	7 cut(s)	19, 419, 619, 740, 847, 1160, 1481
HpaII	CCGG	4 cut(s)	185, 258, 406, 461
HphI	GGTGA	7 cut(s)	277, 290, 538, 724, 911, 1415, 1490
Hpy166II	GTNNAC	2 cut(s)	902, 958
Hpy188III	TCNNGA	8 cut(s)	623, 782, 872, 1157, 1289, 1324, 1403, 1490
Hpy8I	GTNNAC	2 cut(s)	902, 958
Hpy99I	CGWCG	4 cut(s)	133, 167, 210, 523
HpyAV	CCTTC	4 cut(s)	850, 967, 1219, 1295
HpyCH4III	ACNGT	3 cut(s)	289, 559, 1349
HpyCH4IV	ACGT	3 cut(s)	282, 344, 954
HpyCH4V	TGCA	7 cut(s)	469, 910, 929, 1192, 1396, 1450, 1522
HpyF10VI	GCNNNNNNNGC	3 cut(s)	202, 226, 466
HpyF3I	CTNAG	4 cut(s)	10, 44, 504, 1290
HpySE526I	ACGT	3 cut(s)	282, 344, 954
Hsp92I	GRCGYC	2 cut(s)	282, 776
Hsp92II	CATG	8 cut(s)	295, 785, 845, 875, 933, 1327, 1430, 1454
HspAI	GCGC	5 cut(s)	159, 191, 218, 310, 776
KasI	GGCGCC	1 cut(s)	775
Ksp22I	TGATCA	1 cut(s)	1326
Kzo9I	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
LmnI	GCTCC	5 cut(s)	5, 201, 248, 260, 592
Lsp1109I	GCAGC	2 cut(s)	205, 526
LweI	GCATC	3 cut(s)	1179, 1405, 1405
MaeI	CTAG	1 cut(s)	1531
MaeII	ACGT	3 cut(s)	282, 344, 954
MaeIII	GTNAC	4 cut(s)	278, 283, 638, 865
MalI	GATC	6 cut(s)	270, 399, 993, 1140, 1328, 1362
MbiI	CCGCTC	1 cut(s)	1421
MboI	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
MfeI	CAATTG	1 cut(s)	692
MflI	RGATCY	2 cut(s)	991, 1360
MhlI	GDGCHC	2 cut(s)	50, 733
MluCI	AATT	8 cut(s)	52, 210, 473, 683, 692, 891, 1265, 1517
Mly113I	GGCGCC	1 cut(s)	776
MlyI	GAGTC	2 cut(s)	749, 1154
MmeI	TCCRAC	2 cut(s)	152, 642
MroXI	GAANNNNTTC	1 cut(s)	1284
MseI	TTAA	5 cut(s)	225, 918, 1046, 1128, 1380
MslI	CAYNNNNRTG	2 cut(s)	290, 1250
MspI	CCGG	4 cut(s)	185, 258, 406, 461
MspR9I	CCNGG	5 cut(s)	16, 169, 185, 407, 710
MunI	CAATTG	1 cut(s)	692
MvaI	CCWGG	3 cut(s)	16, 169, 710
MvnI	CGCG	4 cut(s)	159, 191, 218, 1176
MwoI	GCNNNNNNNGC	3 cut(s)	202, 226, 466
NarI	GGCGCC	1 cut(s)	776
NciI	CCSGG	2 cut(s)	185, 407
NdeII	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
NlaIII	CATG	8 cut(s)	295, 785, 845, 875, 933, 1327, 1430, 1454
NlaIV	GGNNCC	4 cut(s)	7, 244, 731, 777
NmeAIII	GCCGAG	2 cut(s)	287, 660
NmuCI	GTSAC	2 cut(s)	278, 283
NspV	TTCGAA	2 cut(s)	575, 702
PagI	TCATGA	3 cut(s)	781, 871, 1323
PcsI	WCGNNNNNNNCGW	2 cut(s)	419, 1173
PdmI	GAANNNNTTC	1 cut(s)	1284
PfeI	GAWTC	5 cut(s)	19, 419, 619, 847, 1481
PkrI	GCNGC	6 cut(s)	190, 195, 309, 516, 750, 1420
PleI	GAGTC	2 cut(s)	748, 1154
PluTI	GGCGCC	1 cut(s)	779
PpsI	GAGTC	2 cut(s)	748, 1154
Ppu21I	YACGTR	1 cut(s)	345
PpuMI	RGGWCCY	1 cut(s)	859
PshAI	GACNNNNGTC	1 cut(s)	39
PshBI	ATTAAT	2 cut(s)	1128, 1380
PsiI	TTATAA	1 cut(s)	1074
Psp124BI	GAGCTC	1 cut(s)	50
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	3 cut(s)	14, 167, 708
PspGI	CCWGG	3 cut(s)	14, 167, 708
PspN4I	GGNNCC	4 cut(s)	7, 244, 731, 777
PspOMI	GGGCCC	1 cut(s)	729
PspPI	GGNCC	4 cut(s)	613, 729, 730, 859
PspPPI	RGGWCCY	1 cut(s)	859
PsuI	RGATCY	2 cut(s)	991, 1360
RsaI	GTAC	1 cut(s)	1509
RsaNI	GTAC	1 cut(s)	1508
RseI	CAYNNNNRTG	2 cut(s)	290, 1250
SacI	GAGCTC	1 cut(s)	50
SaqAI	TTAA	5 cut(s)	225, 918, 1046, 1128, 1380
SatI	GCNGC	6 cut(s)	189, 194, 308, 515, 749, 1419
Sau3AI	GATC	6 cut(s)	268, 397, 991, 1138, 1326, 1360
Sau96I	GGNCC	4 cut(s)	613, 729, 730, 859
SchI	GAGTC	2 cut(s)	749, 1154
ScrFI	CCNGG	5 cut(s)	16, 169, 185, 407, 710
SduI	GDGCHC	2 cut(s)	50, 733
SfaNI	GCATC	3 cut(s)	1179, 1405, 1405
SfoI	GGCGCC	1 cut(s)	777
SfuI	TTCGAA	2 cut(s)	575, 702
SinI	GGWCC	1 cut(s)	859
SmiMI	CAYNNNNRTG	2 cut(s)	290, 1250
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
Sse9I	AATT	8 cut(s)	52, 210, 473, 683, 692, 891, 1265, 1517
SsiI	CCGC	8 cut(s)	157, 178, 189, 307, 549, 727, 748, 1419
SspDI	GGCGCC	1 cut(s)	775
SspMI	CTAG	1 cut(s)	1531
SstI	GAGCTC	1 cut(s)	50
StyD4I	CCNGG	5 cut(s)	14, 167, 183, 405, 708
TaaI	ACNGT	3 cut(s)	289, 559, 1349
TaiI	ACGT	3 cut(s)	285, 347, 957
TaqI	TCGA	6 cut(s)	50, 208, 422, 575, 702, 1278
TasI	AATT	8 cut(s)	52, 210, 473, 683, 692, 891, 1265, 1517
TatI	WGTACW	1 cut(s)	1507
TauI	GCSGC	4 cut(s)	191, 310, 751, 1421
TfiI	GAWTC	5 cut(s)	19, 419, 619, 847, 1481
Tru1I	TTAA	5 cut(s)	225, 918, 1046, 1128, 1380
Tru9I	TTAA	5 cut(s)	225, 918, 1046, 1128, 1380
TscAI	CASTG	3 cut(s)	564, 917, 1115
TseFI	GTSAC	2 cut(s)	278, 283
TseI	GCWGC	2 cut(s)	193, 514
Tsp45I	GTSAC	2 cut(s)	278, 283
TspDTI	ATGAA	3 cut(s)	798, 1233, 1312
TspRI	CASTG	3 cut(s)	564, 917, 1115
VpaK11BI	GGWCC	1 cut(s)	859
VspI	ATTAAT	2 cut(s)	1128, 1380
XagI	CCTNNNNNAGG	2 cut(s)	13, 1473
XapI	RAATTY	3 cut(s)	52, 210, 1265
XmiI	GTMKAC	1 cut(s)	957
XmnI	GAANNNNTTC	1 cut(s)	1284
XspI	CTAG	1 cut(s)	1531
ZraI	GACGTC	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.