Prupe.1G153100_v2.0.a1

protein trichome birefringence-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
12071046 .. 12075300
4255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G153100.1

Sequence Viewer

Length: 1368 bp
ATGTCTAAGGACCCATCTCACCAGCCTGAGACTGAAACCATGCCATTCTTTGAAGTTTTTAAGAAGTTTAAGCGTTACAAGCTCTTTGAGCCGTCTTTGGGCGTTTTGGGTTTCTTCTTTGCCAGTGTCTGTGTAATTTTGTGCTTCTTCTACTTGGATTATAGAGCTGTGGTTAAAGGGTTTCGGTTCCCGGGTCAATCGGAGCGGTTTATGTGGCTGCAGACAGACAGGTCGGTCAAGGATCCGAGGGTTGAGTTTTTAGAACAAAAGGGTGGTGGATGTGATGTGTTTGAAGGGGATTGGGTGTGGGATGAGTCCTACCCCTTGTATAACTCCAAAGATTGCCGCTTTTTGGATGACGGCTTTAGGTGCACTGAGAATGGCCGGCCTGATTTATTTTATACCAAGTGGAGATGGCAACCCAGACATTGCAACTTGCCTAGATTTGATGCGAAGTTGATGTTAGAAAAACTGCGTGGCAAGCGGCTAGTGTTTGTTGGTGATTCAATTGGAAGAAACCAATGGGAATCACTCCTCTGCATGCTCTCTTCTGTAATTCCTAATAAGGATTCAATCTATGAAGTGAATGGCAACCCAATTACTAAGCACAAAGGGTTCTTGGTGTTCAAATTTAAGGATTTTAACTGCACTGTTGAGTACTACAGGTCTCCATTTCTAGTACTTCAGAGCCGCCGTCCTTCTGGAACTTTACAAAATGTCAGAACAACTATGAAAGTGGATCAAATGGACTGGAATTCTGCAAAGTGGAGAGATGCAGATGTGCTGGTCTTCAACACAGGGCACTGGTGGAATTATGAGAAGACTATAAGAGCGGGTTGTTACTTCCAGGTAGGGGCAGAAGTAAAGATGGAAATGAGCGTAGAAGATGCATATCACAGATCCATGGAGACTGTGTTGCACTGGATAGACACTGAAGTAAATTCAAGCAAGACTCAGGTTTTCTTTCGAACATACGCCCCTGTGCATTTCAGAGGCGGGGATTGGAAGACGGGGGGAAACTGCCACTCGGAGACTCTGCCTGAGCTAGGGTCCTCATTGGTTCCTCCTCAATCTTGGGATCAATTCAGGATAGCCAATGCTGTGCTATCAGCTCACTCAAACACATCAAAGGCAACGGAAATTGATATATTAAACGTAACTCGAATGACTGCACGAAGAAAAGATGGGCATTCGTCTTTGTACTATTTGGGTCCTAAAGTTGGCCCTGCGCCTCTCCATCGCCAAGACTGCAGCCACTGGTGTCTGCCTGGAGTCCCTGACACATGGAATGAGCTACTCTATGCGCTATTCCTAAAGCATGAGATGACTAGCAAATTTAACTCATCAACTTATAGGGCACAGGTATGA

Protein Analysis

456

Amino Acids

53.08

Weight (kDa)

8.68

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 229, 233
AccBSI CCGCTC 2 cut(s) 205, 833
AciI CCGC 6 cut(s) 205, 346, 484, 691, 833, 996
AclWI GGATC 5 cut(s) 236, 249, 747, 894, 1086
AcoI YGGCCR 1 cut(s) 382
AcsI RAATTY 4 cut(s) 629, 754, 940, 1334
AcuI CTGAAG 2 cut(s) 668, 954
AfaI GTAC 3 cut(s) 659, 681, 1202
AfiI CCNNNNNNNGG 5 cut(s) 98, 352, 853, 1046, 1220
AgsI TTSAA 7 cut(s) 53, 293, 507, 573, 628, 793, 945
AjnI CCWGG 2 cut(s) 846, 1267
AluBI AGCT 5 cut(s) 82, 167, 1045, 1112, 1294
AluI AGCT 5 cut(s) 82, 167, 1045, 1112, 1294
Alw21I GWGCWC 1 cut(s) 374
Alw26I GTCTC 4 cut(s) 23, 672, 902, 1025
Alw44I GTGCAC 1 cut(s) 370
AlwI GGATC 5 cut(s) 236, 249, 747, 894, 1086
AlwNI CAGNNNCTG 2 cut(s) 129, 1257
Ama87I CYCGRG 1 cut(s) 190
AoxI GGCC 3 cut(s) 382, 386, 1222
ApaLI GTGCAC 1 cut(s) 370
ApeKI GCWGC 2 cut(s) 217, 1251
ApoI RAATTY 4 cut(s) 629, 754, 940, 1334
AspLEI GCGC 2 cut(s) 1231, 1306
AspS9I GGNCC 4 cut(s) 10, 1050, 1211, 1223
AsuC2I CCSGG 2 cut(s) 191, 192
AsuHPI GGTGA 2 cut(s) 11, 512
AsuII TTCGAA 1 cut(s) 967
AvaI CYCGRG 1 cut(s) 190
AvaII GGWCC 3 cut(s) 10, 1050, 1211
BaeGI GKGCMC 3 cut(s) 374, 804, 1360
BamHI GGATCC 1 cut(s) 241
BbsI GAAGAC 3 cut(s) 781, 827, 1013
Bbv12I GWGCWC 1 cut(s) 374
BbvI GCAGC 2 cut(s) 204, 1263
BccI CCATC 5 cut(s) 22, 408, 862, 1178, 1245
BceAI ACGGC 3 cut(s) 76, 376, 678
BciT130I CCWGG 2 cut(s) 848, 1269
BcnI CCSGG 2 cut(s) 191, 192
BcoDI GTCTC 4 cut(s) 23, 672, 902, 1025
BfaI CTAG 5 cut(s) 441, 488, 677, 1046, 1329
BfmI CTRYAG 3 cut(s) 218, 661, 1249
BisI GCNGC 5 cut(s) 218, 346, 485, 691, 1252
BlsI GCNGC 5 cut(s) 219, 347, 486, 692, 1253
BmcAI AGTACT 2 cut(s) 659, 681
Bme1390I CCNGG 4 cut(s) 191, 192, 848, 1269
Bme18I GGWCC 3 cut(s) 10, 1050, 1211
BmeT110I CYCGRG 1 cut(s) 190
BmgT120I GGNCC 4 cut(s) 10, 1050, 1211, 1223
BmiI GGNNCC 6 cut(s) 12, 188, 243, 1051, 1062, 1212
BmrFI CCNGG 4 cut(s) 191, 192, 848, 1269
BmsI GCATC 3 cut(s) 439, 763, 877
BpiI GAAGAC 3 cut(s) 781, 827, 1013
BpmI CTGGAG 1 cut(s) 1290
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 967
BpuMI CCSGG 2 cut(s) 191, 192
BsaBI GATNNNNATC 1 cut(s) 891
BsaI GGTCTC 1 cut(s) 672
BsaJI CCNNGG 3 cut(s) 190, 245, 903
BsaXI ACNNNNNCTCC 2 cut(s) 899, 929
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 352, 853, 1046, 1220
Bse118I RCCGGY 1 cut(s) 384
Bse1I ACTGG 5 cut(s) 123, 755, 809, 926, 1262
Bse3DI GCAATG 1 cut(s) 427
Bse8I GATNNNNATC 1 cut(s) 891
BseBI CCWGG 2 cut(s) 848, 1269
BseDI CCNNGG 3 cut(s) 190, 245, 903
BseGI GGATG 3 cut(s) 284, 316, 361
BseJI GATNNNNATC 1 cut(s) 891
BseLI CCNNNNNNNGG 5 cut(s) 98, 352, 853, 1046, 1220
BseMI GCAATG 1 cut(s) 427
BseMII CTCAG 4 cut(s) 18, 366, 968, 1032
BseNI ACTGG 5 cut(s) 123, 755, 809, 926, 1262
BseRI GAGGAG 2 cut(s) 524, 1056
BseSI GKGCMC 3 cut(s) 374, 804, 1360
BseXI GCAGC 2 cut(s) 204, 1263
BsgI GTGCAG 2 cut(s) 631, 1155
BshFI GGCC 3 cut(s) 384, 388, 1224
BsiHKAI GWGCWC 1 cut(s) 374
BsiHKCI CYCGRG 1 cut(s) 190
BsiSI CCGG 2 cut(s) 191, 385
BslFI GGGAC 1 cut(s) 1259
BslI CCNNNNNNNGG 5 cut(s) 98, 352, 853, 1046, 1220
BsmAI GTCTC 4 cut(s) 23, 672, 902, 1025
BsmFI GGGAC 1 cut(s) 1259
BsmI GAATGC 1 cut(s) 1189
BsnI GGCC 3 cut(s) 384, 388, 1224
Bso31I GGTCTC 1 cut(s) 672
BsoBI CYCGRG 1 cut(s) 190
Bsp119I TTCGAA 1 cut(s) 967
Bsp1286I GDGCHC 3 cut(s) 374, 804, 1360
Bsp143I GATC 4 cut(s) 241, 739, 899, 1078
Bsp19I CCATGG 1 cut(s) 903
BspACI CCGC 6 cut(s) 205, 346, 484, 691, 833, 996
BspANI GGCC 3 cut(s) 384, 388, 1224
BspCNI CTCAG 4 cut(s) 19, 367, 967, 1033
BspLI GGNNCC 6 cut(s) 12, 188, 243, 1051, 1062, 1212
BspMAI CTGCAG 2 cut(s) 222, 1253
BspPI GGATC 5 cut(s) 236, 249, 747, 894, 1086
BspT104I TTCGAA 1 cut(s) 967
BspTNI GGTCTC 1 cut(s) 672
BsrBI CCGCTC 2 cut(s) 205, 833
BsrDI GCAATG 1 cut(s) 427
BsrFI RCCGGY 1 cut(s) 384
BsrI ACTGG 5 cut(s) 123, 755, 809, 926, 1262
BssAI RCCGGY 1 cut(s) 384
BssECI CCNNGG 3 cut(s) 190, 245, 903
BssMI GATC 4 cut(s) 241, 739, 899, 1078
BssT1I CCWWGG 1 cut(s) 903
Bst2UI CCWGG 2 cut(s) 848, 1269
Bst4CI ACNGT 2 cut(s) 652, 913
Bst6I CTCTTC 1 cut(s) 553
BstBI TTCGAA 1 cut(s) 967
BstC8I GCNNGC 3 cut(s) 386, 482, 542
BstDEI CTNAG 6 cut(s) 6, 27, 375, 603, 954, 1041
BstDSI CCRYGG 1 cut(s) 903
BstENI CCTNNNNNAGG 1 cut(s) 1044
BstF5I GGATG 3 cut(s) 284, 316, 361
BstHHI GCGC 2 cut(s) 1231, 1306
BstKTI GATC 4 cut(s) 244, 742, 902, 1081
BstMAI GTCTC 4 cut(s) 23, 672, 902, 1025
BstMBI GATC 4 cut(s) 241, 739, 899, 1078
BstMWI GCNNNNNNNGC 5 cut(s) 79, 88, 369, 481, 1248
BstNI CCWGG 2 cut(s) 848, 1269
BstNSI RCATGY 1 cut(s) 544
BstSCI CCNGG 4 cut(s) 189, 190, 846, 1267
BstSFI CTRYAG 3 cut(s) 218, 661, 1249
BstSLI GKGCMC 3 cut(s) 374, 804, 1360
BstV1I GCAGC 2 cut(s) 204, 1263
BstV2I GAAGAC 3 cut(s) 781, 827, 1013
BstX2I RGATCY 2 cut(s) 241, 899
BstYI RGATCY 2 cut(s) 241, 899
BsuRI GGCC 3 cut(s) 384, 388, 1224
BtgI CCRYGG 1 cut(s) 903
BtgZI GCGATG 1 cut(s) 1223
BtsCI GGATG 3 cut(s) 284, 316, 361
BtsIMutI CAGTG 7 cut(s) 130, 372, 648, 802, 919, 930, 1255
Cac8I GCNNGC 3 cut(s) 386, 482, 542
CaiI CAGNNNCTG 2 cut(s) 129, 1257
CfoI GCGC 2 cut(s) 1231, 1306
Cfr10I RCCGGY 1 cut(s) 384
Cfr13I GGNCC 4 cut(s) 10, 1050, 1211, 1223
Cfr9I CCCGGG 1 cut(s) 190
Csp6I GTAC 3 cut(s) 658, 680, 1201
CviAII CATG 5 cut(s) 40, 541, 904, 1284, 1319
CviQI GTAC 3 cut(s) 658, 680, 1201
DdeI CTNAG 6 cut(s) 6, 27, 375, 603, 954, 1041
DpnI GATC 4 cut(s) 243, 741, 901, 1080
DpnII GATC 4 cut(s) 241, 739, 899, 1078
DrdI GACNNNNNNGTC 2 cut(s) 229, 233
DseDI GACNNNNNNGTC 2 cut(s) 229, 233
EaeI YGGCCR 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 553
EarI CTCTTC 1 cut(s) 553
Eco130I CCWWGG 1 cut(s) 903
Eco31I GGTCTC 1 cut(s) 672
Eco47I GGWCC 3 cut(s) 10, 1050, 1211
Eco57I CTGAAG 2 cut(s) 668, 954
Eco88I CYCGRG 1 cut(s) 190
EcoNI CCTNNNNNAGG 1 cut(s) 1044
EcoO109I RGGNCCY 3 cut(s) 10, 1050, 1211
EcoRI GAATTC 1 cut(s) 754
EcoRII CCWGG 2 cut(s) 846, 1267
EcoT14I CCWWGG 1 cut(s) 903
EcoT22I ATGCAT 1 cut(s) 892
ErhI CCWWGG 1 cut(s) 903
FaeI CATG 5 cut(s) 43, 544, 907, 1287, 1322
FaqI GGGAC 1 cut(s) 1259
FatI CATG 5 cut(s) 39, 540, 903, 1283, 1318
FauI CCCGC 2 cut(s) 826, 989
Fnu4HI GCNGC 5 cut(s) 218, 346, 485, 691, 1252
FokI GGATG 3 cut(s) 291, 323, 368
FseI GGCCGGCC 1 cut(s) 388
Fsp4HI GCNGC 5 cut(s) 218, 346, 485, 691, 1252
FspBI CTAG 5 cut(s) 441, 488, 677, 1046, 1329
GlaI GCGC 2 cut(s) 1230, 1305
GluI GCNGC 5 cut(s) 218, 346, 485, 691, 1252
GsuI CTGGAG 1 cut(s) 1290
HaeIII GGCC 3 cut(s) 384, 388, 1224
HapII CCGG 2 cut(s) 191, 385
HhaI GCGC 2 cut(s) 1231, 1306
Hin1II CATG 5 cut(s) 43, 544, 907, 1287, 1322
Hin6I GCGC 2 cut(s) 1229, 1304
HinP1I GCGC 2 cut(s) 1229, 1304
HinfI GANTC 7 cut(s) 314, 503, 527, 569, 952, 1033, 1272
HpaII CCGG 2 cut(s) 191, 385
HphI GGTGA 2 cut(s) 11, 512
Hpy166II GTNNAC 1 cut(s) 372
Hpy188I TCNGA 6 cut(s) 202, 246, 687, 722, 992, 1030
Hpy188III TCNNGA 2 cut(s) 702, 1087
Hpy8I GTNNAC 1 cut(s) 372
HpyAV CCTTC 2 cut(s) 287, 708
HpyCH4III ACNGT 2 cut(s) 652, 913
HpyCH4IV ACGT 1 cut(s) 1155
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 88, 369, 481, 1248
HpyF3I CTNAG 6 cut(s) 6, 27, 375, 603, 954, 1041
HpySE526I ACGT 1 cut(s) 1155
Hsp92II CATG 5 cut(s) 43, 544, 907, 1287, 1322
HspAI GCGC 2 cut(s) 1229, 1304
KroI GCCGGC 1 cut(s) 384
KroNI GCCGGC 1 cut(s) 386
Kzo9I GATC 4 cut(s) 241, 739, 899, 1078
LmnI GCTCC 1 cut(s) 202
Lsp1109I GCAGC 2 cut(s) 204, 1263
LweI GCATC 3 cut(s) 439, 763, 877
MaeI CTAG 5 cut(s) 441, 488, 677, 1046, 1329
MaeII ACGT 1 cut(s) 1155
MaeIII GTNAC 3 cut(s) 74, 839, 1156
MalI GATC 4 cut(s) 243, 741, 901, 1080
MbiI CCGCTC 2 cut(s) 205, 833
MboI GATC 4 cut(s) 241, 739, 899, 1078
MboII GAAGA 9 cut(s) 106, 139, 525, 540, 781, 832, 896, 1018, 1188
MfeI CAATTG 1 cut(s) 507
MflI RGATCY 2 cut(s) 241, 899
MhlI GDGCHC 3 cut(s) 374, 804, 1360
MlyI GAGTC 4 cut(s) 323, 946, 1027, 1281
MnlI CCTC 7 cut(s) 240, 545, 986, 1063, 1074, 1077, 1242
Mph1103I ATGCAT 1 cut(s) 892
MroNI GCCGGC 1 cut(s) 384
MseI TTAA 7 cut(s) 60, 69, 174, 633, 642, 1151, 1338
MslI CAYNNNNRTG 1 cut(s) 1363
MspI CCGG 2 cut(s) 191, 385
MspR9I CCNGG 4 cut(s) 191, 192, 848, 1269
MunI CAATTG 1 cut(s) 507
Mva1269I GAATGC 1 cut(s) 1189
MvaI CCWGG 2 cut(s) 848, 1269
MwoI GCNNNNNNNGC 5 cut(s) 79, 88, 369, 481, 1248
NaeI GCCGGC 1 cut(s) 386
NciI CCSGG 2 cut(s) 191, 192
NcoI CCATGG 1 cut(s) 903
NdeII GATC 4 cut(s) 241, 739, 899, 1078
NgoMIV GCCGGC 1 cut(s) 384
NlaIII CATG 5 cut(s) 43, 544, 907, 1287, 1322
NlaIV GGNNCC 6 cut(s) 12, 188, 243, 1051, 1062, 1212
NsiI ATGCAT 1 cut(s) 892
NspI RCATGY 1 cut(s) 544
NspV TTCGAA 1 cut(s) 967
PaeI GCATGC 1 cut(s) 544
PctI GAATGC 1 cut(s) 1189
PdiI GCCGGC 1 cut(s) 386
PfeI GAWTC 3 cut(s) 503, 527, 569
PkrI GCNGC 5 cut(s) 219, 347, 486, 692, 1253
PleI GAGTC 4 cut(s) 322, 946, 1027, 1280
PpsI GAGTC 4 cut(s) 322, 946, 1027, 1280
PpuMI RGGWCCY 3 cut(s) 10, 1050, 1211
Psp5II RGGWCCY 3 cut(s) 10, 1050, 1211
Psp6I CCWGG 2 cut(s) 846, 1267
PspGI CCWGG 2 cut(s) 846, 1267
PspN4I GGNNCC 6 cut(s) 12, 188, 243, 1051, 1062, 1212
PspPI GGNCC 4 cut(s) 10, 1050, 1211, 1223
PspPPI RGGWCCY 3 cut(s) 10, 1050, 1211
PstI CTGCAG 2 cut(s) 222, 1253
PstNI CAGNNNCTG 2 cut(s) 129, 1257
PsuI RGATCY 2 cut(s) 241, 899
RigI GGCCGGCC 1 cut(s) 388
RsaI GTAC 3 cut(s) 659, 681, 1202
RsaNI GTAC 3 cut(s) 658, 680, 1201
RseI CAYNNNNRTG 1 cut(s) 1363
SaqAI TTAA 7 cut(s) 60, 69, 174, 633, 642, 1151, 1338
SatI GCNGC 5 cut(s) 218, 346, 485, 691, 1252
Sau3AI GATC 4 cut(s) 241, 739, 899, 1078
Sau96I GGNCC 4 cut(s) 10, 1050, 1211, 1223
ScaI AGTACT 2 cut(s) 659, 681
SchI GAGTC 4 cut(s) 323, 946, 1027, 1281
ScrFI CCNGG 4 cut(s) 191, 192, 848, 1269
SduI GDGCHC 3 cut(s) 374, 804, 1360
SfaNI GCATC 3 cut(s) 439, 763, 877
SfcI CTRYAG 3 cut(s) 218, 661, 1249
SfuI TTCGAA 1 cut(s) 967
SinI GGWCC 3 cut(s) 10, 1050, 1211
SmaI CCCGGG 1 cut(s) 192
SmiMI CAYNNNNRTG 1 cut(s) 1363
SphI GCATGC 1 cut(s) 544
SsiI CCGC 6 cut(s) 205, 346, 484, 691, 833, 996
SspMI CTAG 5 cut(s) 441, 488, 677, 1046, 1329
StyD4I CCNGG 4 cut(s) 189, 190, 846, 1267
StyI CCWWGG 1 cut(s) 903
TaaI ACNGT 2 cut(s) 652, 913
TaiI ACGT 1 cut(s) 1158
TaqI TCGA 2 cut(s) 967, 1162
TaqII GACCGA 1 cut(s) 223
TatI WGTACW 3 cut(s) 657, 679, 1200
TauI GCSGC 3 cut(s) 348, 487, 693
TfiI GAWTC 3 cut(s) 503, 527, 569
Tru1I TTAA 7 cut(s) 60, 69, 174, 633, 642, 1151, 1338
Tru9I TTAA 7 cut(s) 60, 69, 174, 633, 642, 1151, 1338
TscAI CASTG 7 cut(s) 130, 379, 655, 809, 926, 937, 1262
TseI GCWGC 2 cut(s) 217, 1251
TspDTI ATGAA 2 cut(s) 594, 746
TspGWI ACGGA 1 cut(s) 1151
TspMI CCCGGG 1 cut(s) 190
TspRI CASTG 7 cut(s) 130, 379, 655, 809, 926, 937, 1262
VneI GTGCAC 1 cut(s) 370
VpaK11BI GGWCC 3 cut(s) 10, 1050, 1211
XagI CCTNNNNNAGG 1 cut(s) 1044
XapI RAATTY 4 cut(s) 629, 754, 940, 1334
XceI RCATGY 1 cut(s) 544
XmaI CCCGGG 1 cut(s) 190
XspI CTAG 5 cut(s) 441, 488, 677, 1046, 1329
ZrmI AGTACT 2 cut(s) 659, 681
Zsp2I ATGCAT 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.