protein trichome birefringence-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06080 AT3G06080 AT5G19160 AT5G19160 |
| fragaria_vesca | FvH4_4g14780 FvH4_4g14780 FvH4_4g14780 |
| malus_domestica | MD13G1185400.v1.1 MD16G1186300.v1.1 |
| prunus_persica | Prupe.1G153100_v2.0.a1 Prupe.1G153100_v2.0.a1 Prupe.1G153100_v2.0.a1 |
| pyrus_communis | pycom13g15990 pycom16g15590 |
| rosa_chinensis | RchiOBHm_Chr4g0417821 |
| rosa_laevigata | RLG00000007899 |
| rosa_multiflora | Rmu_sc0000480.1_g000001 Rmu_sc0018885.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00361240 |
| rosa_rugosa | Rorug04G0149300 |
| rosa_samantha | Rh4CG222600 Rh4DG209600 |
| rosa_wichuraiana | Rw4G017950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1057 |
| AccBSI | CCGCTC | 1 cut(s) | 202 |
| AccII | CGCG | 1 cut(s) | 1355 |
| AciI | CCGC | 4 cut(s) | 70, 202, 472, 916 |
| AclWI | GGATC | 1 cut(s) | 932 |
| AcoI | YGGCCR | 1 cut(s) | 379 |
| AcsI | RAATTY | 2 cut(s) | 626, 751 |
| AcuI | CTGAAG | 1 cut(s) | 681 |
| AcvI | CACGTG | 1 cut(s) | 210 |
| AdeI | CACNNNGTG | 1 cut(s) | 405 |
| AfaI | GTAC | 3 cut(s) | 656, 1199, 1330 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 95, 96, 349, 698, 850 |
| AflIII | ACRYGT | 1 cut(s) | 282 |
| AgsI | TTSAA | 9 cut(s) | 32, 58, 67, 76, 154, 570, 625, 790, 1141 |
| AhlI | ACTAGT | 1 cut(s) | 1325 |
| AjiI | CACGTC | 1 cut(s) | 283 |
| AjnI | CCWGG | 3 cut(s) | 843, 1023, 1264 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 958, 990 |
| AluBI | AGCT | 6 cut(s) | 53, 79, 164, 704, 1042, 1109 |
| AluI | AGCT | 6 cut(s) | 53, 79, 164, 704, 1042, 1109 |
| Alw26I | GTCTC | 2 cut(s) | 126, 899 |
| AlwI | GGATC | 1 cut(s) | 932 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1254 |
| Ama87I | CYCGRG | 1 cut(s) | 951 |
| AoxI | GGCC | 1 cut(s) | 379 |
| ApeKI | GCWGC | 3 cut(s) | 50, 415, 1248 |
| ApoI | RAATTY | 2 cut(s) | 626, 751 |
| AspLEI | GCGC | 2 cut(s) | 1355, 1357 |
| AspS9I | GGNCC | 4 cut(s) | 10, 736, 897, 1208 |
| AsuHPI | GGTGA | 3 cut(s) | 509, 1007, 1013 |
| AsuII | TTCGAA | 1 cut(s) | 964 |
| AsuNHI | GCTAGC | 1 cut(s) | 1042 |
| AvaI | CYCGRG | 1 cut(s) | 951 |
| AvaII | GGWCC | 4 cut(s) | 10, 736, 897, 1208 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 918, 951 |
| BanI | GGYRCC | 1 cut(s) | 1057 |
| BanII | GRGCYC | 1 cut(s) | 90 |
| BbrPI | CACGTG | 1 cut(s) | 210 |
| BbsI | GAAGAC | 3 cut(s) | 537, 824, 1328 |
| BbvI | GCAGC | 3 cut(s) | 62, 427, 1260 |
| BccI | CCATC | 6 cut(s) | 22, 284, 350, 405, 859, 1175 |
| BceAI | ACGGC | 2 cut(s) | 366, 672 |
| BciT130I | CCWGG | 3 cut(s) | 845, 1025, 1266 |
| BcoDI | GTCTC | 2 cut(s) | 126, 899 |
| BcuI | ACTAGT | 1 cut(s) | 1325 |
| BfaI | CTAG | 3 cut(s) | 231, 1043, 1326 |
| BfmI | CTRYAG | 3 cut(s) | 48, 658, 930 |
| BglII | AGATCT | 1 cut(s) | 662 |
| BisI | GCNGC | 3 cut(s) | 51, 416, 1249 |
| BlsI | GCNGC | 3 cut(s) | 52, 417, 1250 |
| BmcAI | AGTACT | 1 cut(s) | 656 |
| Bme1390I | CCNGG | 3 cut(s) | 845, 1025, 1266 |
| Bme18I | GGWCC | 4 cut(s) | 10, 736, 897, 1208 |
| BmeT110I | CYCGRG | 1 cut(s) | 951 |
| BmgBI | CACGTC | 1 cut(s) | 283 |
| BmgT120I | GGNCC | 4 cut(s) | 10, 736, 897, 1208 |
| BmiI | GGNNCC | 4 cut(s) | 12, 1015, 1059, 1209 |
| BmrFI | CCNGG | 3 cut(s) | 845, 1025, 1266 |
| BmsI | GCATC | 5 cut(s) | 329, 436, 760, 874, 1349 |
| BmtI | GCTAGC | 1 cut(s) | 1046 |
| BpiI | GAAGAC | 3 cut(s) | 537, 824, 1328 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 676, 708, 1031, 1063 |
| BpmI | CTGGAG | 1 cut(s) | 1287 |
| Bpu10I | CCTNAGC | 2 cut(s) | 171, 1038 |
| Bpu14I | TTCGAA | 1 cut(s) | 964 |
| BsaAI | YACGTR | 1 cut(s) | 210 |
| BsaBI | GATNNNNATC | 1 cut(s) | 888 |
| BsaWI | WCCGGW | 1 cut(s) | 188 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 958, 988, 994, 1024 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 95, 96, 349, 698, 850 |
| Bse118I | RCCGGY | 1 cut(s) | 1236 |
| Bse1I | ACTGG | 3 cut(s) | 517, 806, 1259 |
| Bse3DI | GCAATG | 3 cut(s) | 229, 1031, 1137 |
| Bse8I | GATNNNNATC | 1 cut(s) | 888 |
| BseBI | CCWGG | 3 cut(s) | 845, 1025, 1266 |
| BseGI | GGATG | 3 cut(s) | 313, 344, 358 |
| BseJI | GATNNNNATC | 1 cut(s) | 888 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 95, 96, 349, 698, 850 |
| BseMI | GCAATG | 3 cut(s) | 229, 1031, 1137 |
| BseMII | CTCAG | 2 cut(s) | 9, 1029 |
| BseNI | ACTGG | 3 cut(s) | 517, 806, 1259 |
| BsePI | GCGCGC | 1 cut(s) | 1353 |
| BseRI | GAGGAG | 1 cut(s) | 278 |
| BseXI | GCAGC | 3 cut(s) | 62, 427, 1260 |
| BsgI | GTGCAG | 2 cut(s) | 628, 701 |
| Bsh1236I | CGCG | 1 cut(s) | 1355 |
| BshFI | GGCC | 1 cut(s) | 381 |
| BshNI | GGYRCC | 1 cut(s) | 1057 |
| BsiHKCI | CYCGRG | 1 cut(s) | 951 |
| BsiSI | CCGG | 2 cut(s) | 189, 1237 |
| BslFI | GGGAC | 1 cut(s) | 488 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 95, 96, 349, 698, 850 |
| BsmAI | GTCTC | 2 cut(s) | 126, 899 |
| BsmFI | GGGAC | 1 cut(s) | 488 |
| BsmI | GAATGC | 1 cut(s) | 1342 |
| BsnI | GGCC | 1 cut(s) | 381 |
| BsoBI | CYCGRG | 1 cut(s) | 951 |
| Bsp119I | TTCGAA | 1 cut(s) | 964 |
| Bsp1286I | GDGCHC | 1 cut(s) | 90 |
| Bsp143I | GATC | 3 cut(s) | 662, 714, 937 |
| BspACI | CCGC | 4 cut(s) | 70, 202, 472, 916 |
| BspANI | GGCC | 1 cut(s) | 381 |
| BspCNI | CTCAG | 2 cut(s) | 10, 1030 |
| BspFNI | CGCG | 1 cut(s) | 1355 |
| BspLI | GGNNCC | 4 cut(s) | 12, 1015, 1059, 1209 |
| BspMAI | CTGCAG | 2 cut(s) | 52, 934 |
| BspOI | GCTAGC | 1 cut(s) | 1046 |
| BspPI | GGATC | 1 cut(s) | 932 |
| BspT104I | TTCGAA | 1 cut(s) | 964 |
| BspT107I | GGYRCC | 1 cut(s) | 1057 |
| BsrBI | CCGCTC | 1 cut(s) | 202 |
| BsrDI | GCAATG | 3 cut(s) | 229, 1031, 1137 |
| BsrFI | RCCGGY | 1 cut(s) | 1236 |
| BsrI | ACTGG | 3 cut(s) | 517, 806, 1259 |
| BssAI | RCCGGY | 1 cut(s) | 1236 |
| BssHII | GCGCGC | 1 cut(s) | 1353 |
| BssMI | GATC | 3 cut(s) | 662, 714, 937 |
| Bst2UI | CCWGG | 3 cut(s) | 845, 1025, 1266 |
| Bst4CI | ACNGT | 4 cut(s) | 649, 910, 1305, 1333 |
| Bst6I | CTCTTC | 1 cut(s) | 1054 |
| BstBAI | YACGTR | 1 cut(s) | 210 |
| BstBI | TTCGAA | 1 cut(s) | 964 |
| BstC8I | GCNNGC | 4 cut(s) | 539, 1044, 1238, 1355 |
| BstDEI | CTNAG | 5 cut(s) | 6, 18, 171, 1038, 1217 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 696 |
| BstF5I | GGATG | 3 cut(s) | 313, 344, 358 |
| BstFNI | CGCG | 1 cut(s) | 1355 |
| BstHHI | GCGC | 2 cut(s) | 1355, 1357 |
| BstKTI | GATC | 3 cut(s) | 665, 717, 940 |
| BstMAI | GTCTC | 2 cut(s) | 126, 899 |
| BstMBI | GATC | 3 cut(s) | 662, 714, 937 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 76, 85, 478, 1270 |
| BstNI | CCWGG | 3 cut(s) | 845, 1025, 1266 |
| BstNSI | RCATGY | 1 cut(s) | 541 |
| BstSCI | CCNGG | 3 cut(s) | 843, 1023, 1264 |
| BstSFI | CTRYAG | 3 cut(s) | 48, 658, 930 |
| BstUI | CGCG | 1 cut(s) | 1355 |
| BstV1I | GCAGC | 3 cut(s) | 62, 427, 1260 |
| BstV2I | GAAGAC | 3 cut(s) | 537, 824, 1328 |
| BstX2I | RGATCY | 2 cut(s) | 662, 937 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1281 |
| BstYI | RGATCY | 2 cut(s) | 662, 937 |
| BsuRI | GGCC | 1 cut(s) | 381 |
| BtrI | CACGTC | 1 cut(s) | 283 |
| BtsCI | GGATG | 3 cut(s) | 313, 344, 358 |
| BtsI | GCAGTG | 1 cut(s) | 45 |
| BtsIMutI | CAGTG | 7 cut(s) | 45, 524, 645, 799, 1252, 1301, 1338 |
| Cac8I | GCNNGC | 4 cut(s) | 539, 1044, 1238, 1355 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1254 |
| CfoI | GCGC | 2 cut(s) | 1355, 1357 |
| Cfr10I | RCCGGY | 1 cut(s) | 1236 |
| Cfr13I | GGNCC | 4 cut(s) | 10, 736, 897, 1208 |
| Csp6I | GTAC | 3 cut(s) | 655, 1198, 1329 |
| CviAII | CATG | 4 cut(s) | 37, 538, 1281, 1316 |
| CviQI | GTAC | 3 cut(s) | 655, 1198, 1329 |
| DdeI | CTNAG | 5 cut(s) | 6, 18, 171, 1038, 1217 |
| DpnI | GATC | 3 cut(s) | 664, 716, 939 |
| DpnII | GATC | 3 cut(s) | 662, 714, 937 |
| DraI | TTTAAA | 1 cut(s) | 1311 |
| DraIII | CACNNNGTG | 1 cut(s) | 405 |
| EaeI | YGGCCR | 1 cut(s) | 379 |
| Eam1104I | CTCTTC | 1 cut(s) | 1054 |
| EarI | CTCTTC | 1 cut(s) | 1054 |
| Eco24I | GRGCYC | 1 cut(s) | 90 |
| Eco47I | GGWCC | 4 cut(s) | 10, 736, 897, 1208 |
| Eco57I | CTGAAG | 1 cut(s) | 681 |
| Eco72I | CACGTG | 1 cut(s) | 210 |
| Eco88I | CYCGRG | 1 cut(s) | 951 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 696 |
| EcoO109I | RGGNCCY | 2 cut(s) | 10, 1208 |
| EcoRI | GAATTC | 1 cut(s) | 751 |
| EcoRII | CCWGG | 3 cut(s) | 843, 1023, 1264 |
| EcoT22I | ATGCAT | 2 cut(s) | 539, 1342 |
| EcoT38I | GRGCYC | 1 cut(s) | 90 |
| FaeI | CATG | 4 cut(s) | 40, 541, 1284, 1319 |
| FaqI | GGGAC | 1 cut(s) | 488 |
| FatI | CATG | 4 cut(s) | 36, 537, 1280, 1315 |
| FauI | CCCGC | 1 cut(s) | 465 |
| FauNDI | CATATG | 1 cut(s) | 970 |
| Fnu4HI | GCNGC | 3 cut(s) | 51, 416, 1249 |
| FokI | GGATG | 3 cut(s) | 320, 351, 365 |
| FriOI | GRGCYC | 1 cut(s) | 90 |
| Fsp4HI | GCNGC | 3 cut(s) | 51, 416, 1249 |
| FspBI | CTAG | 3 cut(s) | 231, 1043, 1326 |
| GlaI | GCGC | 2 cut(s) | 1354, 1356 |
| GluI | GCNGC | 3 cut(s) | 51, 416, 1249 |
| GsuI | CTGGAG | 1 cut(s) | 1287 |
| HaeIII | GGCC | 1 cut(s) | 381 |
| HapII | CCGG | 2 cut(s) | 189, 1237 |
| HhaI | GCGC | 2 cut(s) | 1355, 1357 |
| Hin1II | CATG | 4 cut(s) | 40, 541, 1284, 1319 |
| Hin6I | GCGC | 2 cut(s) | 1353, 1355 |
| HinP1I | GCGC | 2 cut(s) | 1353, 1355 |
| HpaII | CCGG | 2 cut(s) | 189, 1237 |
| HphI | GGTGA | 3 cut(s) | 509, 1007, 1013 |
| Hpy166II | GTNNAC | 1 cut(s) | 207 |
| Hpy188I | TCNGA | 5 cut(s) | 19, 199, 719, 989, 1173 |
| Hpy188III | TCNNGA | 4 cut(s) | 58, 386, 699, 756 |
| Hpy8I | GTNNAC | 1 cut(s) | 207 |
| HpyAV | CCTTC | 1 cut(s) | 705 |
| HpyCH4III | ACNGT | 4 cut(s) | 649, 910, 1305, 1333 |
| HpyCH4IV | ACGT | 2 cut(s) | 209, 282 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 76, 85, 478, 1270 |
| HpyF3I | CTNAG | 5 cut(s) | 6, 18, 171, 1038, 1217 |
| HpySE526I | ACGT | 2 cut(s) | 209, 282 |
| Hsp92II | CATG | 4 cut(s) | 40, 541, 1284, 1319 |
| HspAI | GCGC | 2 cut(s) | 1353, 1355 |
| KroI | GCCGGC | 1 cut(s) | 1236 |
| KroNI | GCCGGC | 1 cut(s) | 1238 |
| Kzo9I | GATC | 3 cut(s) | 662, 714, 937 |
| LmnI | GCTCC | 4 cut(s) | 199, 701, 979, 1013 |
| Lsp1109I | GCAGC | 3 cut(s) | 62, 427, 1260 |
| LweI | GCATC | 5 cut(s) | 329, 436, 760, 874, 1349 |
| MaeI | CTAG | 3 cut(s) | 231, 1043, 1326 |
| MaeII | ACGT | 2 cut(s) | 209, 282 |
| MaeIII | GTNAC | 4 cut(s) | 278, 836, 1019, 1153 |
| MalI | GATC | 3 cut(s) | 664, 716, 939 |
| MbiI | CCGCTC | 1 cut(s) | 202 |
| MboI | GATC | 3 cut(s) | 662, 714, 937 |
| MboII | GAAGA | 6 cut(s) | 103, 537, 829, 893, 1041, 1333 |
| MfeI | CAATTG | 1 cut(s) | 1160 |
| MflI | RGATCY | 2 cut(s) | 662, 937 |
| MhlI | GDGCHC | 1 cut(s) | 90 |
| MluCI | AATT | 7 cut(s) | 154, 424, 594, 626, 751, 808, 1160 |
| MlyI | GAGTC | 5 cut(s) | 236, 320, 943, 1061, 1084 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| Mph1103I | ATGCAT | 2 cut(s) | 539, 1342 |
| MroNI | GCCGGC | 1 cut(s) | 1236 |
| MseI | TTAA | 4 cut(s) | 455, 630, 1148, 1310 |
| MslI | CAYNNNNRTG | 1 cut(s) | 532 |
| MspI | CCGG | 2 cut(s) | 189, 1237 |
| MspR9I | CCNGG | 3 cut(s) | 845, 1025, 1266 |
| MunI | CAATTG | 1 cut(s) | 1160 |
| Mva1269I | GAATGC | 1 cut(s) | 1342 |
| MvaI | CCWGG | 3 cut(s) | 845, 1025, 1266 |
| MvnI | CGCG | 1 cut(s) | 1355 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 76, 85, 478, 1270 |
| NaeI | GCCGGC | 1 cut(s) | 1238 |
| NdeI | CATATG | 1 cut(s) | 970 |
| NdeII | GATC | 3 cut(s) | 662, 714, 937 |
| NgoMIV | GCCGGC | 1 cut(s) | 1236 |
| NheI | GCTAGC | 1 cut(s) | 1042 |
| NlaIII | CATG | 4 cut(s) | 40, 541, 1284, 1319 |
| NlaIV | GGNNCC | 4 cut(s) | 12, 1015, 1059, 1209 |
| NmuCI | GTSAC | 2 cut(s) | 278, 1019 |
| NsiI | ATGCAT | 2 cut(s) | 539, 1342 |
| NspI | RCATGY | 1 cut(s) | 541 |
| NspV | TTCGAA | 1 cut(s) | 964 |
| PaeI | GCATGC | 1 cut(s) | 541 |
| PauI | GCGCGC | 1 cut(s) | 1353 |
| PctI | GAATGC | 1 cut(s) | 1342 |
| PdiI | GCCGGC | 1 cut(s) | 1238 |
| PfeI | GAWTC | 5 cut(s) | 108, 133, 500, 524, 566 |
| PfoI | TCCNGGA | 1 cut(s) | 843 |
| PkrI | GCNGC | 3 cut(s) | 52, 417, 1250 |
| PleI | GAGTC | 5 cut(s) | 235, 319, 943, 1061, 1083 |
| PmaCI | CACGTG | 1 cut(s) | 210 |
| PmlI | CACGTG | 1 cut(s) | 210 |
| PpsI | GAGTC | 5 cut(s) | 235, 319, 943, 1061, 1083 |
| Ppu21I | YACGTR | 1 cut(s) | 210 |
| PpuMI | RGGWCCY | 2 cut(s) | 10, 1208 |
| Psp5II | RGGWCCY | 2 cut(s) | 10, 1208 |
| Psp6I | CCWGG | 3 cut(s) | 843, 1023, 1264 |
| PspCI | CACGTG | 1 cut(s) | 210 |
| PspGI | CCWGG | 3 cut(s) | 843, 1023, 1264 |
| PspN4I | GGNNCC | 4 cut(s) | 12, 1015, 1059, 1209 |
| PspPI | GGNCC | 4 cut(s) | 10, 736, 897, 1208 |
| PspPPI | RGGWCCY | 2 cut(s) | 10, 1208 |
| PstI | CTGCAG | 2 cut(s) | 52, 934 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1254 |
| PsuI | RGATCY | 2 cut(s) | 662, 937 |
| PteI | GCGCGC | 1 cut(s) | 1353 |
| RsaI | GTAC | 3 cut(s) | 656, 1199, 1330 |
| RsaNI | GTAC | 3 cut(s) | 655, 1198, 1329 |
| RseI | CAYNNNNRTG | 1 cut(s) | 532 |
| SaqAI | TTAA | 4 cut(s) | 455, 630, 1148, 1310 |
| SatI | GCNGC | 3 cut(s) | 51, 416, 1249 |
| Sau3AI | GATC | 3 cut(s) | 662, 714, 937 |
| Sau96I | GGNCC | 4 cut(s) | 10, 736, 897, 1208 |
| ScaI | AGTACT | 1 cut(s) | 656 |
| SchI | GAGTC | 5 cut(s) | 236, 320, 943, 1061, 1084 |
| ScrFI | CCNGG | 3 cut(s) | 845, 1025, 1266 |
| SduI | GDGCHC | 1 cut(s) | 90 |
| SfaNI | GCATC | 5 cut(s) | 329, 436, 760, 874, 1349 |
| SfcI | CTRYAG | 3 cut(s) | 48, 658, 930 |
| SfuI | TTCGAA | 1 cut(s) | 964 |
| SinI | GGWCC | 4 cut(s) | 10, 736, 897, 1208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 532 |
| SpeI | ACTAGT | 1 cut(s) | 1325 |
| SphI | GCATGC | 1 cut(s) | 541 |
| Sse9I | AATT | 7 cut(s) | 154, 424, 594, 626, 751, 808, 1160 |
| SsiI | CCGC | 4 cut(s) | 70, 202, 472, 916 |
| SspMI | CTAG | 3 cut(s) | 231, 1043, 1326 |
| StyD4I | CCNGG | 3 cut(s) | 843, 1023, 1264 |
| TaaI | ACNGT | 4 cut(s) | 649, 910, 1305, 1333 |
| TaiI | ACGT | 2 cut(s) | 212, 285 |
| TaqI | TCGA | 1 cut(s) | 964 |
| TasI | AATT | 7 cut(s) | 154, 424, 594, 626, 751, 808, 1160 |
| TatI | WGTACW | 3 cut(s) | 654, 1197, 1328 |
| TfiI | GAWTC | 5 cut(s) | 108, 133, 500, 524, 566 |
| Tru1I | TTAA | 4 cut(s) | 455, 630, 1148, 1310 |
| Tru9I | TTAA | 4 cut(s) | 455, 630, 1148, 1310 |
| TscAI | CASTG | 7 cut(s) | 52, 524, 652, 806, 1259, 1308, 1338 |
| TseFI | GTSAC | 2 cut(s) | 278, 1019 |
| TseI | GCWGC | 3 cut(s) | 50, 415, 1248 |
| Tsp45I | GTSAC | 2 cut(s) | 278, 1019 |
| TspDTI | ATGAA | 5 cut(s) | 591, 1041, 1148, 1179, 1302 |
| TspRI | CASTG | 7 cut(s) | 52, 524, 652, 806, 1259, 1308, 1338 |
| VpaK11BI | GGWCC | 4 cut(s) | 10, 736, 897, 1208 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 696 |
| XapI | RAATTY | 2 cut(s) | 626, 751 |
| XceI | RCATGY | 1 cut(s) | 541 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 907 |
| XspI | CTAG | 3 cut(s) | 231, 1043, 1326 |
| ZrmI | AGTACT | 1 cut(s) | 656 |
| Zsp2I | ATGCAT | 2 cut(s) | 539, 1342 |