Prupe.1G196300_v2.0.a1

Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
18731442 .. 18733860
2419 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G196300.1

Sequence Viewer

Length: 1053 bp
ATGAAGAAGATGATAGCTCTAGGGTTTGAGGGTTCAGCCAACAAGATTGGCGTTGGGGTTGTCACCTTAGATGGCACAATTTTGTCAAACCCACGCCACACATACATTACCCCTCCCGGCCAAGGGTTCCTTCCCCGCGAAACTGCACAACACCATCTCCAACACATTCTCCCCCTGATTAAATCTGCTCTGGAAACTGCCCAAATAACGCCCAAGGAAATTGATTGCCTTTGTTACACCAAGGGTCCTGGCATGGGAGCACCATTACAAGTTGCTGCTATTGTTGTTAGGGTTCTTTCACAGCTTTGGAAGAAGCCCATTGTTGCAGTTAATCATTGCGTTGCACATATTGAGATGGGAAGGATTGTGACAGGTGCAGATGATCCTGTTGTGTTGTATGTCAGTGGTGGGAACACACAGGTAATTGCATACAGTGAAGGGAGGTATCGAATCTTTGGAGAGACCATTGATATCGCTGTTGGAAATTGCTTGGATCGGTTCGCCAGGGTATTAACACTCTCCAATGACCCAAGCCCTGGATATAACATTGAGCAGCTTGCAAAGAAAGGAGAACAGTATATAGACCTTCCTTATGCTGTGAAAGGGATGGATGTGTCTTTTAGTGGAATTTTGAGCTACATTGAAGCCACTGCTGTGGAGAAGCTCAAGAATAGCGAGTGCACCCCTGCAGATCTATGCTACTCACTCCAGGAAAATGTGTTTGCAATGCTTGTGGAGATAACGGAGCGTGCAATGGCACATTGTGACAAGAAAGATGTCCTTATTGTTGGCGGTGTAGGTTGCAATGAACGCTTGCAAGAGATGATGAGAACTATGTGCTCTGAACGGGGTGGAAGGTTGTTTGCAACTGATGATAGGTATTGTATTGATAACGGTGCCATGATTGCTTATACTGGTCTTCTTGCTTTTGTTCATGGCGCATCAACTCTGTTTGAGGAATCTACTTTTACGCAACGTTTCCGAACTGATGAAGTGGAAGCAATCTGGAGACTAAAAGAGGAGTCAGAAAAACTTAAACGGCTTCATGGATGA

Protein Analysis

351

Amino Acids

38.55

Weight (kDa)

6.02

Isoelectric Point (pI)

32.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014229)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G22720 AT4G22720
fragaria_vesca FvH4_3g16550 FvH4_3g16550
malus_domestica MD17G1219400.v1.1
prunus_persica Prupe.1G196300_v2.0.a1
pyrus_communis pycom17g22410
rosa_chinensis RchiOBHm_Chr1g0331181
rosa_laevigata RLG00000029747
rosa_multiflora Rmu_sc0005711.1_g000004
rosa_roxburghii Rroxscaffold_4G00319280
rosa_rugosa Rorug01G0092100
rosa_samantha Rh1AG116100 Rh1BG087800 Rh1CG111600 Rh1DG120500
rosa_wichuraiana Rw1G009330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 896
AccB7I CCANNNNNTGG 1 cut(s) 536
AccII CGCG 1 cut(s) 138
AciI CCGC 2 cut(s) 136, 792
AclI AACGTT 1 cut(s) 976
AclWI GGATC 2 cut(s) 377, 501
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 1 cut(s) 627
AdeI CACNNNGTG 1 cut(s) 764
AfiI CCNNNNNNNGG 4 cut(s) 122, 123, 254, 536
AgsI TTSAA 1 cut(s) 644
AjnI CCWGG 4 cut(s) 247, 503, 535, 708
AjuI GAANNNNNNNTTGG 2 cut(s) 114, 146
AleI CACNNNNGTG 1 cut(s) 653
AluBI AGCT 5 cut(s) 17, 304, 556, 636, 664
AluI AGCT 5 cut(s) 17, 304, 556, 636, 664
Alw21I GWGCWC 3 cut(s) 262, 683, 842
Alw26I GTCTC 2 cut(s) 455, 1003
Alw44I GTGCAC 1 cut(s) 679
AlwI GGATC 2 cut(s) 377, 501
AoxI GGCC 1 cut(s) 118
ApaLI GTGCAC 1 cut(s) 679
ApeKI GCWGC 2 cut(s) 275, 553
ApoI RAATTY 1 cut(s) 627
AspLEI GCGC 1 cut(s) 941
AspS9I GGNCC 1 cut(s) 245
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 55
AvaII GGWCC 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 683
BanI GGYRCC 1 cut(s) 896
BbsI GAAGAC 1 cut(s) 911
Bbv12I GWGCWC 3 cut(s) 262, 683, 842
BbvI GCAGC 2 cut(s) 262, 565
BccI CCATC 4 cut(s) 65, 162, 349, 601
BciT130I CCWGG 4 cut(s) 249, 505, 537, 710
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 2 cut(s) 455, 1003
BfaI CTAG 1 cut(s) 20
BfmI CTRYAG 1 cut(s) 687
BglII AGATCT 1 cut(s) 691
BisI GCNGC 2 cut(s) 276, 554
BlsI GCNGC 2 cut(s) 277, 555
Bme1390I CCNGG 5 cut(s) 117, 249, 505, 537, 710
Bme18I GGWCC 1 cut(s) 245
BmgT120I GGNCC 1 cut(s) 245
BmiI GGNNCC 3 cut(s) 128, 246, 898
BmrFI CCNGG 5 cut(s) 117, 249, 505, 537, 710
BmsI GCATC 1 cut(s) 950
BpiI GAAGAC 1 cut(s) 911
BpmI CTGGAG 2 cut(s) 692, 1027
BpuEI CTTGAG 1 cut(s) 650
BpuMI CCSGG 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 455
BsaJI CCNNGG 5 cut(s) 121, 213, 240, 504, 535
BsaXI ACNNNNNCTCC 4 cut(s) 141, 153, 171, 183
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 123, 254, 536
Bse1I ACTGG 1 cut(s) 919
Bse3DI GCAATG 4 cut(s) 334, 732, 759, 811
BseBI CCWGG 4 cut(s) 249, 505, 537, 710
BseDI CCNNGG 5 cut(s) 121, 213, 240, 504, 535
BseGI GGATG 2 cut(s) 612, 616
BseLI CCNNNNNNNGG 4 cut(s) 122, 123, 254, 536
BseMI GCAATG 4 cut(s) 334, 732, 759, 811
BseNI ACTGG 1 cut(s) 919
BseRI GAGGAG 1 cut(s) 1034
BseSI GKGCMC 1 cut(s) 683
BseXI GCAGC 2 cut(s) 262, 565
BsgI GTGCAG 2 cut(s) 129, 396
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 1 cut(s) 120
BshNI GGYRCC 1 cut(s) 896
BsiHKAI GWGCWC 3 cut(s) 262, 683, 842
BsiSI CCGG 1 cut(s) 117
BslI CCNNNNNNNGG 4 cut(s) 122, 123, 254, 536
BsmAI GTCTC 2 cut(s) 455, 1003
BsnI GGCC 1 cut(s) 120
Bso31I GGTCTC 1 cut(s) 455
Bsp1286I GDGCHC 3 cut(s) 262, 683, 842
Bsp143I GATC 3 cut(s) 382, 493, 691
BspACI CCGC 2 cut(s) 136, 792
BspANI GGCC 1 cut(s) 120
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 3 cut(s) 128, 246, 898
BspMAI CTGCAG 1 cut(s) 691
BspPI GGATC 2 cut(s) 377, 501
BspT107I GGYRCC 1 cut(s) 896
BspTNI GGTCTC 1 cut(s) 455
BsrDI GCAATG 4 cut(s) 334, 732, 759, 811
BsrI ACTGG 1 cut(s) 919
BssECI CCNNGG 5 cut(s) 121, 213, 240, 504, 535
BssMI GATC 3 cut(s) 382, 493, 691
BssT1I CCWWGG 3 cut(s) 121, 213, 240
Bst2UI CCWGG 4 cut(s) 249, 505, 537, 710
Bst4CI ACNGT 3 cut(s) 434, 576, 896
BstC8I GCNNGC 3 cut(s) 558, 750, 815
BstDEI CTNAG 1 cut(s) 67
BstF5I GGATG 2 cut(s) 612, 616
BstFNI CGCG 1 cut(s) 138
BstHHI GCGC 1 cut(s) 941
BstKTI GATC 3 cut(s) 385, 496, 694
BstMAI GTCTC 2 cut(s) 455, 1003
BstMBI GATC 3 cut(s) 382, 493, 691
BstMWI GCNNNNNNNGC 2 cut(s) 810, 905
BstNI CCWGG 4 cut(s) 249, 505, 537, 710
BstSCI CCNGG 5 cut(s) 115, 247, 503, 535, 708
BstSFI CTRYAG 1 cut(s) 687
BstSLI GKGCMC 1 cut(s) 683
BstUI CGCG 1 cut(s) 138
BstV1I GCAGC 2 cut(s) 262, 565
BstV2I GAAGAC 1 cut(s) 911
BstX2I RGATCY 1 cut(s) 691
BstXI CCANNNNNNTGG 1 cut(s) 655
BstYI RGATCY 1 cut(s) 691
BsuRI GGCC 1 cut(s) 120
BtsCI GGATG 2 cut(s) 612, 616
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 3 cut(s) 409, 439, 648
Cac8I GCNNGC 3 cut(s) 558, 750, 815
CfoI GCGC 1 cut(s) 941
Cfr13I GGNCC 1 cut(s) 245
CspCI CAANNNNNGTGG 2 cut(s) 714, 749
CviAII CATG 4 cut(s) 253, 901, 935, 1046
DdeI CTNAG 1 cut(s) 67
DpnI GATC 3 cut(s) 384, 495, 693
DpnII GATC 3 cut(s) 382, 493, 691
DraIII CACNNNGTG 1 cut(s) 764
EaeI YGGCCR 1 cut(s) 118
Eco130I CCWWGG 3 cut(s) 121, 213, 240
Eco31I GGTCTC 1 cut(s) 455
Eco32I GATATC 1 cut(s) 472
Eco47I GGWCC 1 cut(s) 245
EcoO109I RGGNCCY 1 cut(s) 245
EcoRII CCWGG 4 cut(s) 247, 503, 535, 708
EcoRV GATATC 1 cut(s) 472
EcoT14I CCWWGG 3 cut(s) 121, 213, 240
ErhI CCWWGG 3 cut(s) 121, 213, 240
FaeI CATG 4 cut(s) 256, 904, 938, 1049
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 765, 797
FatI CATG 4 cut(s) 252, 900, 934, 1045
FauI CCCGC 1 cut(s) 143
Fnu4HI GCNGC 2 cut(s) 276, 554
FokI GGATG 2 cut(s) 619, 623
Fsp4HI GCNGC 2 cut(s) 276, 554
FspBI CTAG 1 cut(s) 20
GlaI GCGC 1 cut(s) 940
GluI GCNGC 2 cut(s) 276, 554
GsuI CTGGAG 2 cut(s) 692, 1027
HaeIII GGCC 1 cut(s) 120
HapII CCGG 1 cut(s) 117
HhaI GCGC 1 cut(s) 941
Hin1II CATG 4 cut(s) 256, 904, 938, 1049
Hin6I GCGC 1 cut(s) 939
HinP1I GCGC 1 cut(s) 939
HinfI GANTC 3 cut(s) 450, 959, 1022
HpaII CCGG 1 cut(s) 117
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 1 cut(s) 681
Hpy188I TCNGA 3 cut(s) 844, 983, 1027
Hpy188III TCNNGA 3 cut(s) 191, 667, 1006
Hpy8I GTNNAC 1 cut(s) 681
HpyAV CCTTC 5 cut(s) 140, 354, 431, 596, 849
HpyCH4III ACNGT 3 cut(s) 434, 576, 896
HpyCH4IV ACGT 1 cut(s) 976
HpyF10VI GCNNNNNNNGC 2 cut(s) 810, 905
HpyF3I CTNAG 1 cut(s) 67
HpySE526I ACGT 1 cut(s) 976
Hsp92II CATG 4 cut(s) 256, 904, 938, 1049
HspAI GCGC 1 cut(s) 939
Kzo9I GATC 3 cut(s) 382, 493, 691
LmnI GCTCC 2 cut(s) 257, 745
Lsp1109I GCAGC 2 cut(s) 262, 565
LweI GCATC 1 cut(s) 950
MaeI CTAG 1 cut(s) 20
MaeII ACGT 1 cut(s) 976
MaeIII GTNAC 4 cut(s) 61, 233, 367, 764
MalI GATC 3 cut(s) 384, 495, 693
MboI GATC 3 cut(s) 382, 493, 691
MboII GAAGA 4 cut(s) 16, 19, 322, 911
MflI RGATCY 1 cut(s) 691
MhlI GDGCHC 3 cut(s) 262, 683, 842
MluCI AATT 5 cut(s) 78, 219, 423, 484, 627
MlyI GAGTC 1 cut(s) 1031
MmeI TCCRAC 2 cut(s) 184, 460
MnlI CCTC 5 cut(s) 22, 123, 435, 949, 1012
MseI TTAA 4 cut(s) 180, 330, 512, 1035
MslI CAYNNNNRTG 1 cut(s) 653
MspI CCGG 1 cut(s) 117
MspR9I CCNGG 5 cut(s) 117, 249, 505, 537, 710
MvaI CCWGG 4 cut(s) 249, 505, 537, 710
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 2 cut(s) 810, 905
NciI CCSGG 1 cut(s) 117
NdeII GATC 3 cut(s) 382, 493, 691
NlaIII CATG 4 cut(s) 256, 904, 938, 1049
NlaIV GGNNCC 3 cut(s) 128, 246, 898
NmuCI GTSAC 3 cut(s) 61, 367, 764
OliI CACNNNNGTG 1 cut(s) 653
PfeI GAWTC 2 cut(s) 450, 959
PflMI CCANNNNNTGG 1 cut(s) 536
PfoI TCCNGGA 1 cut(s) 708
PkrI GCNGC 2 cut(s) 277, 555
PleI GAGTC 1 cut(s) 1030
PpsI GAGTC 1 cut(s) 1030
PpuMI RGGWCCY 1 cut(s) 245
Psp1406I AACGTT 1 cut(s) 976
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 4 cut(s) 247, 503, 535, 708
PspGI CCWGG 4 cut(s) 247, 503, 535, 708
PspN4I GGNNCC 3 cut(s) 128, 246, 898
PspPI GGNCC 1 cut(s) 245
PspPPI RGGWCCY 1 cut(s) 245
PstI CTGCAG 1 cut(s) 691
PsuI RGATCY 1 cut(s) 691
RseI CAYNNNNRTG 1 cut(s) 653
SaqAI TTAA 4 cut(s) 180, 330, 512, 1035
SatI GCNGC 2 cut(s) 276, 554
Sau3AI GATC 3 cut(s) 382, 493, 691
Sau96I GGNCC 1 cut(s) 245
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 5 cut(s) 117, 249, 505, 537, 710
SduI GDGCHC 3 cut(s) 262, 683, 842
SfaNI GCATC 1 cut(s) 950
SfcI CTRYAG 1 cut(s) 687
SinI GGWCC 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 653
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
Sse9I AATT 5 cut(s) 78, 219, 423, 484, 627
SsiI CCGC 2 cut(s) 136, 792
SspMI CTAG 1 cut(s) 20
StyD4I CCNGG 5 cut(s) 115, 247, 503, 535, 708
StyI CCWWGG 3 cut(s) 121, 213, 240
TaaI ACNGT 3 cut(s) 434, 576, 896
TaiI ACGT 1 cut(s) 979
TaqI TCGA 1 cut(s) 448
TasI AATT 5 cut(s) 78, 219, 423, 484, 627
TfiI GAWTC 2 cut(s) 450, 959
Tru1I TTAA 4 cut(s) 180, 330, 512, 1035
Tru9I TTAA 4 cut(s) 180, 330, 512, 1035
TscAI CASTG 3 cut(s) 409, 439, 655
TseFI GTSAC 3 cut(s) 61, 367, 764
TseI GCWGC 2 cut(s) 275, 553
Tsp45I GTSAC 3 cut(s) 61, 367, 764
TspDTI ATGAA 5 cut(s) 17, 822, 923, 1005, 1034
TspGWI ACGGA 1 cut(s) 758
TspRI CASTG 3 cut(s) 409, 439, 655
Van91I CCANNNNNTGG 1 cut(s) 536
VneI GTGCAC 1 cut(s) 679
VpaK11BI GGWCC 1 cut(s) 245
XapI RAATTY 1 cut(s) 627
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.