Prupe.1G209700_v2.0.a1

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016310
Physical Location & Seq
Reverse (-)
22358982 .. 22360810
1829 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G209700.1

Sequence Viewer

Length: 1257 bp
ATGAAGCCTGCGTGCTTATTTCTGAACAAAATGCCTAAACTCAAACGCCGGCTGCTCCTGACCGTGCTGCTGCTGCTGGCAGTCTCTTCAGCTTCCTGGTTTGCCATCTTTCTCCTTCATTCGTCAGAAGAACAAGGCAGCCCTTCCAATTTGGGTCGTCTCTCAGCTTCTCCTCCCACACCACTTCCTGTAGATTCGGGTCCTTACCACAACTGGCAGCTCTTTGCTGCTGACTTTGAAGACATGATCCAAAGCTTCAAGATTTATGTTTATCCCACCAATTCTGCTTCTTCTTCTTTTGCTTCCTCTGCTTCCATTTTCCTTCCCCACCCAAACCCATTCGATCCAAAACTCGGAAACTACTTCAGCGAGCACATGTTCAAGCTGTCTCTGCTTAGCAGCTCCCTCATCACCACCAACCCAGAAAAAGCCAATCTCTTCTTCCTACCCTTCTCAGTCAATCTCCTCAGAAACGACCCACGTGTCCATTCTGAGCCGTCCATTGCAGATTTTGTTGCCCGATACACCACCAGCATCAGCCAAGATTTGCCCTTCTGGAATGCCTCTCTAGGCTCTGACCATTTCTATGCCTGCTGTCACTCTGTTTGTCGAGAGGCCTCCTCCAAACATGTTGGGTTGCGCAACAATGCCATTCAGCTCACTTGCTCCTCCAGCTACTTCCAAAGATTCTACGTTACCCACAAAGATGTTGCCTTGCCCCAAGTTTGGCCTCGCCCTCCTCAGCATGCCCTCAACCCCCCACATGCCAGGGATAAGCTTGTGTACTTTGCGGGCCGAATTCAAAACTCTAATATCCGGCAGCAGCTGGTAGATTTATGGGGCAATGAGACATACATGGATATATTCCCAGGGCAACCATCTTACCCTTATGAGGAGGGGTTTAGGAGGAGCAAGTATTGCCTCCATGTTAAAGGCTATGAGGTCAACACTGCCAGGGTGAGCGATGCCGTACATTATGGGTGCGTTCCTGTTATAATTTCCAACCACTACGAGCTTCCATTTGCCAATGTATTAGACTGGAGCAAGTTTTCAGTTATTGTCAACAATGGCGATGTTGCCTTGTTGAAGAGGACATTGTTGTCGATAACAAGACGAAAGTACATGAGCATGTACCATAATTTGTGTGAGGTTCGAAGGCATTTTGTTTGGCATGAGACTCCCAAGGGCTATGACTCTTTCTACATGACTGCTTACCAGTTGTGGCTCAAAAGGAGCTCCCTGCGTCTGTCTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

419

Amino Acids

47.83

Weight (kDa)

9.18

Isoelectric Point (pI)

61.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016310)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g21950
malus_domestica MD13G1135600.v1.1 MD16G1131200.v1.1
prunus_persica Prupe.1G209700_v2.0.a1
pyrus_communis pycom13g11830
rosa_chinensis RchiOBHm_Chr4g0428151
rosa_laevigata RLG00000007175
rosa_multiflora Rmu_sc0004940.1_g000009 Rmu_sc0009599.1_g000009
rosa_roxburghii Rroxscaffold_5G00369880
rosa_rugosa Rorug04G0223000
rosa_samantha Rh4BG285800 Rh4CG301100 Rh4DG282800
rosa_wichuraiana Rw4G024340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 995
AasI GACNNNNNNGTC 2 cut(s) 482, 1099
Acc16I TGCGCA 1 cut(s) 641
AciI CCGC 1 cut(s) 791
AclWI GGATC 2 cut(s) 241, 338
AcsI RAATTY 1 cut(s) 798
AcuI CTGAAG 2 cut(s) 72, 349
AcvI CACGTG 1 cut(s) 482
AfaI GTAC 4 cut(s) 785, 972, 1121, 1133
AfiI CCNNNNNNNGG 3 cut(s) 353, 726, 892
AflIII ACRYGT 3 cut(s) 375, 481, 628
AgsI TTSAA 5 cut(s) 239, 259, 382, 803, 1087
AjnI CCWGG 4 cut(s) 95, 767, 868, 953
AjuI GAANNNNNNNTTGG 2 cut(s) 425, 457
Alw21I GWGCWC 2 cut(s) 375, 1238
Alw26I GTCTC 5 cut(s) 88, 164, 393, 842, 1169
AlwI GGATC 2 cut(s) 241, 338
AlwNI CAGNNNCTG 1 cut(s) 826
AoxI GGCC 3 cut(s) 615, 728, 793
ApoI RAATTY 1 cut(s) 798
AspLEI GCGC 1 cut(s) 642
AspS9I GGNCC 2 cut(s) 200, 793
AsuHPI GGTGA 2 cut(s) 403, 970
AsuII TTCGAA 1 cut(s) 1153
AvaII GGWCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 1238
BbrPI CACGTG 1 cut(s) 482
BbsI GAAGAC 2 cut(s) 246, 1242
Bbv12I GWGCWC 2 cut(s) 375, 1238
BbvCI CCTCAGC 1 cut(s) 741
BccI CCATC 2 cut(s) 113, 886
BceAI ACGGC 2 cut(s) 481, 953
BciT130I CCWGG 4 cut(s) 97, 769, 870, 955
BcoDI GTCTC 5 cut(s) 88, 164, 393, 842, 1169
BfaI CTAG 1 cut(s) 569
BfmI CTRYAG 1 cut(s) 189
BlpI GCTNAGC 1 cut(s) 395
Bme1390I CCNGG 4 cut(s) 97, 769, 870, 955
Bme18I GGWCC 1 cut(s) 200
BmgT120I GGNCC 2 cut(s) 200, 793
BmiI GGNNCC 1 cut(s) 201
BmrFI CCNGG 4 cut(s) 97, 769, 870, 955
BmsI GCATC 2 cut(s) 543, 955
BpiI GAAGAC 2 cut(s) 246, 1242
BplI GAGNNNNNCTC 2 cut(s) 605, 637
BpmI CTGGAG 2 cut(s) 655, 1060
Bpu10I CCTNAGC 1 cut(s) 741
Bpu1102I GCTNAGC 1 cut(s) 395
Bpu14I TTCGAA 1 cut(s) 1153
BsaAI YACGTR 1 cut(s) 482
BsaJI CCNNGG 5 cut(s) 768, 868, 869, 954, 1182
Bsc4I CCNNNNNNNGG 3 cut(s) 353, 726, 892
Bse118I RCCGGY 1 cut(s) 48
Bse1I ACTGG 3 cut(s) 218, 1043, 1216
Bse3DI GCAATG 2 cut(s) 501, 850
BseBI CCWGG 4 cut(s) 97, 769, 870, 955
BseDI CCNNGG 5 cut(s) 768, 868, 869, 954, 1182
BseLI CCNNNNNNNGG 3 cut(s) 353, 726, 892
BseMI GCAATG 2 cut(s) 501, 850
BseMII CTCAG 5 cut(s) 177, 468, 481, 483, 755
BseNI ACTGG 3 cut(s) 218, 1043, 1216
BseRI GAGGAG 7 cut(s) 162, 455, 610, 658, 729, 908, 922
BshFI GGCC 3 cut(s) 617, 730, 795
BsiHKAI GWGCWC 2 cut(s) 375, 1238
BsiSI CCGG 2 cut(s) 49, 817
BslI CCNNNNNNNGG 3 cut(s) 353, 726, 892
BsmAI GTCTC 5 cut(s) 88, 164, 393, 842, 1169
BsmBI CGTCTC 1 cut(s) 164
BsmI GAATGC 1 cut(s) 565
BsnI GGCC 3 cut(s) 617, 730, 795
Bsp119I TTCGAA 1 cut(s) 1153
Bsp1286I GDGCHC 2 cut(s) 375, 1238
Bsp143I GATC 2 cut(s) 246, 343
Bsp1720I GCTNAGC 1 cut(s) 395
BspACI CCGC 1 cut(s) 791
BspANI GGCC 3 cut(s) 617, 730, 795
BspCNI CTCAG 5 cut(s) 176, 467, 480, 484, 754
BspLI GGNNCC 1 cut(s) 201
BspPI GGATC 2 cut(s) 241, 338
BspT104I TTCGAA 1 cut(s) 1153
BsrDI GCAATG 2 cut(s) 501, 850
BsrFI RCCGGY 1 cut(s) 48
BsrI ACTGG 3 cut(s) 218, 1043, 1216
BssAI RCCGGY 1 cut(s) 48
BssECI CCNNGG 5 cut(s) 768, 868, 869, 954, 1182
BssMI GATC 2 cut(s) 246, 343
BssT1I CCWWGG 1 cut(s) 1182
Bst2UI CCWGG 4 cut(s) 97, 769, 870, 955
Bst4CI ACNGT 1 cut(s) 64
Bst6I CTCTTC 3 cut(s) 91, 443, 1082
BstAPI GCANNNNNTGC 1 cut(s) 918
BstBAI YACGTR 1 cut(s) 482
BstBI TTCGAA 1 cut(s) 1153
BstC8I GCNNGC 8 cut(s) 9, 13, 50, 78, 371, 592, 747, 793
BstDEI CTNAG 6 cut(s) 163, 395, 454, 467, 492, 741
BstHHI GCGC 1 cut(s) 642
BstKTI GATC 2 cut(s) 249, 346
BstMAI GTCTC 5 cut(s) 88, 164, 393, 842, 1169
BstMBI GATC 2 cut(s) 246, 343
BstMWI GCNNNNNNNGC 5 cut(s) 73, 308, 391, 672, 918
BstNI CCWGG 4 cut(s) 97, 769, 870, 955
BstNSI RCATGY 5 cut(s) 379, 632, 749, 767, 1132
BstSCI CCNGG 4 cut(s) 95, 767, 868, 953
BstSFI CTRYAG 1 cut(s) 189
BstV2I GAAGAC 2 cut(s) 246, 1242
BsuRI GGCC 3 cut(s) 617, 730, 795
BtgZI GCGATG 2 cut(s) 978, 1086
BtsI GCAGTG 1 cut(s) 948
BtsIMutI CAGTG 1 cut(s) 948
Cac8I GCNNGC 8 cut(s) 9, 13, 50, 78, 371, 592, 747, 793
CaiI CAGNNNCTG 1 cut(s) 826
CfoI GCGC 1 cut(s) 642
Cfr10I RCCGGY 1 cut(s) 48
Cfr13I GGNCC 2 cut(s) 200, 793
CseI GACGC 1 cut(s) 1232
Csp6I GTAC 4 cut(s) 784, 971, 1120, 1132
CviQI GTAC 4 cut(s) 784, 971, 1120, 1132
DdeI CTNAG 6 cut(s) 163, 395, 454, 467, 492, 741
DpnI GATC 2 cut(s) 248, 345
DpnII GATC 2 cut(s) 246, 343
DrdI GACNNNNNNGTC 2 cut(s) 482, 1099
DseDI GACNNNNNNGTC 2 cut(s) 482, 1099
Eam1104I CTCTTC 3 cut(s) 91, 443, 1082
EarI CTCTTC 3 cut(s) 91, 443, 1082
Ecl136II GAGCTC 1 cut(s) 1236
Eco130I CCWWGG 1 cut(s) 1182
Eco147I AGGCCT 1 cut(s) 617
Eco24I GRGCYC 1 cut(s) 1238
Eco47I GGWCC 1 cut(s) 200
Eco53kI GAGCTC 1 cut(s) 1236
Eco57I CTGAAG 2 cut(s) 72, 349
Eco72I CACGTG 1 cut(s) 482
EcoICRI GAGCTC 1 cut(s) 1236
EcoO109I RGGNCCY 1 cut(s) 200
EcoRI GAATTC 1 cut(s) 798
EcoRII CCWGG 4 cut(s) 95, 767, 868, 953
EcoT14I CCWWGG 1 cut(s) 1182
EcoT38I GRGCYC 1 cut(s) 1238
ErhI CCWWGG 1 cut(s) 1182
Esp3I CGTCTC 1 cut(s) 164
FauI CCCGC 1 cut(s) 784
FriOI GRGCYC 1 cut(s) 1238
FspBI CTAG 1 cut(s) 569
FspI TGCGCA 1 cut(s) 641
GlaI GCGC 1 cut(s) 641
GsuI CTGGAG 2 cut(s) 655, 1060
HaeIII GGCC 3 cut(s) 617, 730, 795
HapII CCGG 2 cut(s) 49, 817
HgaI GACGC 1 cut(s) 1232
HhaI GCGC 1 cut(s) 642
Hin6I GCGC 1 cut(s) 640
HinP1I GCGC 1 cut(s) 640
HincII GTYRAC 2 cut(s) 946, 1063
HindII GTYRAC 2 cut(s) 946, 1063
HindIII AAGCTT 2 cut(s) 253, 776
HinfI GANTC 4 cut(s) 194, 687, 1177, 1193
HpaII CCGG 2 cut(s) 49, 817
HphI GGTGA 2 cut(s) 403, 970
Hpy166II GTNNAC 3 cut(s) 784, 946, 1063
Hpy188I TCNGA 6 cut(s) 24, 127, 356, 470, 493, 577
Hpy188III TCNNGA 4 cut(s) 58, 259, 556, 611
Hpy8I GTNNAC 3 cut(s) 784, 946, 1063
HpyAV CCTTC 6 cut(s) 125, 153, 332, 460, 562, 1149
HpyCH4III ACNGT 1 cut(s) 64
HpyCH4IV ACGT 2 cut(s) 481, 693
HpyCH4V TGCA 1 cut(s) 506
HpyF10VI GCNNNNNNNGC 5 cut(s) 73, 308, 391, 672, 918
HpyF3I CTNAG 6 cut(s) 163, 395, 454, 467, 492, 741
HpySE526I ACGT 2 cut(s) 481, 693
HspAI GCGC 1 cut(s) 640
KroI GCCGGC 1 cut(s) 48
KroNI GCCGGC 1 cut(s) 50
Kzo9I GATC 2 cut(s) 246, 343
LmnI GCTCC 7 cut(s) 60, 407, 671, 909, 1041, 1233, 1241
LweI GCATC 2 cut(s) 543, 955
MaeI CTAG 1 cut(s) 569
MaeII ACGT 2 cut(s) 481, 693
MaeIII GTNAC 2 cut(s) 596, 694
MalI GATC 2 cut(s) 248, 345
MboI GATC 2 cut(s) 246, 343
MboII GAAGA 9 cut(s) 78, 140, 251, 282, 285, 430, 433, 1099, 1242
MhlI GDGCHC 2 cut(s) 375, 1238
MluCI AATT 5 cut(s) 148, 280, 798, 996, 1138
MlyI GAGTC 2 cut(s) 1171, 1187
MmeI TCCRAC 1 cut(s) 1026
MroNI GCCGGC 1 cut(s) 48
MseI TTAA 1 cut(s) 930
MslI CAYNNNNRTG 3 cut(s) 585, 705, 1127
MspA1I CMGCKG 1 cut(s) 826
MspI CCGG 2 cut(s) 49, 817
MspR9I CCNGG 4 cut(s) 97, 769, 870, 955
Mva1269I GAATGC 1 cut(s) 565
MvaI CCWGG 4 cut(s) 97, 769, 870, 955
MwoI GCNNNNNNNGC 5 cut(s) 73, 308, 391, 672, 918
NaeI GCCGGC 1 cut(s) 50
NdeII GATC 2 cut(s) 246, 343
NgoMIV GCCGGC 1 cut(s) 48
NlaIV GGNNCC 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 596
NsbI TGCGCA 1 cut(s) 641
NspI RCATGY 5 cut(s) 379, 632, 749, 767, 1132
NspV TTCGAA 1 cut(s) 1153
PaeI GCATGC 1 cut(s) 749
PasI CCCWGGG 1 cut(s) 869
PceI AGGCCT 1 cut(s) 617
PciI ACATGT 2 cut(s) 375, 628
PctI GAATGC 1 cut(s) 565
PdiI GCCGGC 1 cut(s) 50
PfeI GAWTC 2 cut(s) 194, 687
PleI GAGTC 2 cut(s) 1171, 1187
PmaCI CACGTG 1 cut(s) 482
PmlI CACGTG 1 cut(s) 482
PpsI GAGTC 2 cut(s) 1171, 1187
Ppu21I YACGTR 1 cut(s) 482
PpuMI RGGWCCY 1 cut(s) 200
PscI ACATGT 2 cut(s) 375, 628
PsiI TTATAA 1 cut(s) 995
Psp124BI GAGCTC 1 cut(s) 1238
Psp5II RGGWCCY 1 cut(s) 200
Psp6I CCWGG 4 cut(s) 95, 767, 868, 953
PspCI CACGTG 1 cut(s) 482
PspGI CCWGG 4 cut(s) 95, 767, 868, 953
PspN4I GGNNCC 1 cut(s) 201
PspPI GGNCC 2 cut(s) 200, 793
PspPPI RGGWCCY 1 cut(s) 200
PstNI CAGNNNCTG 1 cut(s) 826
PvuII CAGCTG 1 cut(s) 826
RsaI GTAC 4 cut(s) 785, 972, 1121, 1133
RsaNI GTAC 4 cut(s) 784, 971, 1120, 1132
RseI CAYNNNNRTG 3 cut(s) 585, 705, 1127
SacI GAGCTC 1 cut(s) 1238
SaqAI TTAA 1 cut(s) 930
Sau3AI GATC 2 cut(s) 246, 343
Sau96I GGNCC 2 cut(s) 200, 793
SchI GAGTC 2 cut(s) 1171, 1187
ScrFI CCNGG 4 cut(s) 97, 769, 870, 955
SduI GDGCHC 2 cut(s) 375, 1238
SfaNI GCATC 2 cut(s) 543, 955
SfcI CTRYAG 1 cut(s) 189
SfuI TTCGAA 1 cut(s) 1153
SinI GGWCC 1 cut(s) 200
SmiMI CAYNNNNRTG 3 cut(s) 585, 705, 1127
SphI GCATGC 1 cut(s) 749
Sse9I AATT 5 cut(s) 148, 280, 798, 996, 1138
SseBI AGGCCT 1 cut(s) 617
SsiI CCGC 1 cut(s) 791
SspMI CTAG 1 cut(s) 569
SstI GAGCTC 1 cut(s) 1238
StuI AGGCCT 1 cut(s) 617
StyD4I CCNGG 4 cut(s) 95, 767, 868, 953
StyI CCWWGG 1 cut(s) 1182
TaaI ACNGT 1 cut(s) 64
TaiI ACGT 2 cut(s) 484, 696
TaqI TCGA 4 cut(s) 342, 610, 1103, 1153
TasI AATT 5 cut(s) 148, 280, 798, 996, 1138
TatI WGTACW 2 cut(s) 783, 1119
TfiI GAWTC 2 cut(s) 194, 687
Tru1I TTAA 1 cut(s) 930
Tru9I TTAA 1 cut(s) 930
TscAI CASTG 1 cut(s) 955
TseFI GTSAC 1 cut(s) 596
Tsp45I GTSAC 1 cut(s) 596
TspDTI ATGAA 2 cut(s) 17, 107
TspRI CASTG 1 cut(s) 955
VpaK11BI GGWCC 1 cut(s) 200
XapI RAATTY 1 cut(s) 798
XceI RCATGY 5 cut(s) 379, 632, 749, 767, 1132
XspI CTAG 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.