Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13190 AT5G13190 |
| fragaria_vesca | FvH4_4g23080 FvH4_4g23080 |
| malus_domestica | MD13G1126300.v1.1 MD16G1126800.v1.1 |
| prunus_persica | Prupe.1G219100_v2.0.a1 |
| pyrus_communis | pycom13g10980 pycom16g10760 |
| rosa_chinensis | RchiOBHm_Chr4g0429351 |
| rosa_multiflora | Rmu_sc0003708.1_g000047 Rmu_sc0003904.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00370960 |
| rosa_rugosa | Rorug04G0235200 |
| rosa_samantha | Rh4AG291000 Rh4BG296900 Rh4CG312400 Rh4DG293800 |
| rosa_wichuraiana | Rw4G025200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 146 |
| AccII | CGCG | 1 cut(s) | 71 |
| AccIII | TCCGGA | 1 cut(s) | 176 |
| AciI | CCGC | 2 cut(s) | 144, 359 |
| AclWI | GGATC | 4 cut(s) | 67, 338, 356, 369 |
| AfaI | GTAC | 1 cut(s) | 48 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 319 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| AjiI | CACGTC | 1 cut(s) | 190 |
| AjnI | CCWGG | 1 cut(s) | 207 |
| AluBI | AGCT | 2 cut(s) | 215, 387 |
| AluI | AGCT | 2 cut(s) | 215, 387 |
| Alw26I | GTCTC | 2 cut(s) | 129, 284 |
| AlwI | GGATC | 4 cut(s) | 67, 338, 356, 369 |
| Aor13HI | TCCGGA | 1 cut(s) | 176 |
| ApeKI | GCWGC | 2 cut(s) | 212, 252 |
| AspLEI | GCGC | 1 cut(s) | 71 |
| AsuHPI | GGTGA | 2 cut(s) | 34, 338 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BbvI | GCAGC | 2 cut(s) | 224, 239 |
| BccI | CCATC | 1 cut(s) | 19 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 1 cut(s) | 209 |
| BcoDI | GTCTC | 2 cut(s) | 129, 284 |
| BisI | GCNGC | 2 cut(s) | 213, 253 |
| BlsI | GCNGC | 2 cut(s) | 214, 254 |
| Bme1390I | CCNGG | 1 cut(s) | 209 |
| BmgBI | CACGTC | 1 cut(s) | 190 |
| BmiI | GGNNCC | 1 cut(s) | 363 |
| BmrFI | CCNGG | 1 cut(s) | 209 |
| BmsI | GCATC | 3 cut(s) | 117, 222, 239 |
| BsaWI | WCCGGW | 1 cut(s) | 176 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 130, 160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 319 |
| Bse118I | RCCGGY | 1 cut(s) | 19 |
| Bse1I | ACTGG | 1 cut(s) | 377 |
| Bse3DI | GCAATG | 1 cut(s) | 298 |
| BseAI | TCCGGA | 1 cut(s) | 176 |
| BseBI | CCWGG | 1 cut(s) | 209 |
| BseGI | GGATG | 2 cut(s) | 108, 254 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 319 |
| BseMI | GCAATG | 1 cut(s) | 298 |
| BseNI | ACTGG | 1 cut(s) | 377 |
| BseXI | GCAGC | 2 cut(s) | 224, 239 |
| Bsh1236I | CGCG | 1 cut(s) | 71 |
| BsiSI | CCGG | 2 cut(s) | 20, 177 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 319 |
| BsmAI | GTCTC | 2 cut(s) | 129, 284 |
| Bsp13I | TCCGGA | 1 cut(s) | 176 |
| Bsp143I | GATC | 4 cut(s) | 72, 194, 343, 361 |
| BspACI | CCGC | 2 cut(s) | 144, 359 |
| BspEI | TCCGGA | 1 cut(s) | 176 |
| BspFNI | CGCG | 1 cut(s) | 71 |
| BspLI | GGNNCC | 1 cut(s) | 363 |
| BspPI | GGATC | 4 cut(s) | 67, 338, 356, 369 |
| BsrBI | CCGCTC | 1 cut(s) | 146 |
| BsrDI | GCAATG | 1 cut(s) | 298 |
| BsrFI | RCCGGY | 1 cut(s) | 19 |
| BsrI | ACTGG | 1 cut(s) | 377 |
| BssAI | RCCGGY | 1 cut(s) | 19 |
| BssMI | GATC | 4 cut(s) | 72, 194, 343, 361 |
| Bst2UI | CCWGG | 1 cut(s) | 209 |
| Bst4CI | ACNGT | 2 cut(s) | 167, 278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 3 cut(s) | 67, 226, 399 |
| BstF5I | GGATG | 2 cut(s) | 108, 254 |
| BstFNI | CGCG | 1 cut(s) | 71 |
| BstHHI | GCGC | 1 cut(s) | 71 |
| BstKTI | GATC | 4 cut(s) | 75, 197, 346, 364 |
| BstMAI | GTCTC | 2 cut(s) | 129, 284 |
| BstMBI | GATC | 4 cut(s) | 72, 194, 343, 361 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 221, 309, 398 |
| BstNI | CCWGG | 1 cut(s) | 209 |
| BstSCI | CCNGG | 1 cut(s) | 207 |
| BstUI | CGCG | 1 cut(s) | 71 |
| BstV1I | GCAGC | 2 cut(s) | 224, 239 |
| BstX2I | RGATCY | 2 cut(s) | 343, 361 |
| BstYI | RGATCY | 2 cut(s) | 343, 361 |
| BtrI | CACGTC | 1 cut(s) | 190 |
| BtsCI | GGATG | 2 cut(s) | 108, 254 |
| BtsI | GCAGTG | 1 cut(s) | 392 |
| BtsIMutI | CAGTG | 2 cut(s) | 370, 392 |
| Cac8I | GCNNGC | 3 cut(s) | 67, 226, 399 |
| CfoI | GCGC | 1 cut(s) | 71 |
| Cfr10I | RCCGGY | 1 cut(s) | 19 |
| Csp6I | GTAC | 1 cut(s) | 47 |
| CviAII | CATG | 3 cut(s) | 229, 270, 402 |
| CviJI | RGCY | 6 cut(s) | 19, 202, 207, 215, 224, 387 |
| CviKI_1 | RGCY | 6 cut(s) | 19, 202, 207, 215, 224, 387 |
| CviQI | GTAC | 1 cut(s) | 47 |
| DpnI | GATC | 4 cut(s) | 74, 196, 345, 363 |
| DpnII | GATC | 4 cut(s) | 72, 194, 343, 361 |
| EcoRII | CCWGG | 1 cut(s) | 207 |
| FaeI | CATG | 3 cut(s) | 232, 273, 405 |
| FaiI | YATR | 6 cut(s) | 93, 230, 239, 271, 288, 403 |
| FatI | CATG | 3 cut(s) | 228, 269, 401 |
| FauI | CCCGC | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 2 cut(s) | 213, 253 |
| FokI | GGATG | 2 cut(s) | 95, 261 |
| Fsp4HI | GCNGC | 2 cut(s) | 213, 253 |
| GlaI | GCGC | 1 cut(s) | 70 |
| GluI | GCNGC | 2 cut(s) | 213, 253 |
| HapII | CCGG | 2 cut(s) | 20, 177 |
| HhaI | GCGC | 1 cut(s) | 71 |
| Hin1II | CATG | 3 cut(s) | 232, 273, 405 |
| Hin6I | GCGC | 1 cut(s) | 69 |
| HinP1I | GCGC | 1 cut(s) | 69 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HpaII | CCGG | 2 cut(s) | 20, 177 |
| HphI | GGTGA | 2 cut(s) | 34, 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 13, 163 |
| Hpy188I | TCNGA | 2 cut(s) | 194, 343 |
| Hpy188III | TCNNGA | 1 cut(s) | 177 |
| Hpy8I | GTNNAC | 2 cut(s) | 13, 163 |
| Hpy99I | CGWCG | 1 cut(s) | 47 |
| HpyAV | CCTTC | 3 cut(s) | 160, 276, 313 |
| HpyCH4III | ACNGT | 2 cut(s) | 167, 278 |
| HpyCH4IV | ACGT | 2 cut(s) | 42, 189 |
| HpyCH4V | TGCA | 3 cut(s) | 228, 392, 401 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 221, 309, 398 |
| HpySE526I | ACGT | 2 cut(s) | 42, 189 |
| Hsp92II | CATG | 3 cut(s) | 232, 273, 405 |
| HspAI | GCGC | 1 cut(s) | 69 |
| Kpn2I | TCCGGA | 1 cut(s) | 176 |
| Kzo9I | GATC | 4 cut(s) | 72, 194, 343, 361 |
| LmnI | GCTCC | 1 cut(s) | 151 |
| LpnPI | CCDG | 7 cut(s) | 33, 51, 190, 194, 221, 268, 358 |
| Lsp1109I | GCAGC | 2 cut(s) | 224, 239 |
| LweI | GCATC | 3 cut(s) | 117, 222, 239 |
| MaeII | ACGT | 2 cut(s) | 42, 189 |
| MalI | GATC | 4 cut(s) | 74, 196, 345, 363 |
| MbiI | CCGCTC | 1 cut(s) | 146 |
| MboI | GATC | 4 cut(s) | 72, 194, 343, 361 |
| MflI | RGATCY | 2 cut(s) | 343, 361 |
| MluCI | AATT | 1 cut(s) | 172 |
| MnlI | CCTC | 1 cut(s) | 375 |
| MroI | TCCGGA | 1 cut(s) | 176 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspI | CCGG | 2 cut(s) | 20, 177 |
| MspR9I | CCNGG | 1 cut(s) | 209 |
| MvaI | CCWGG | 1 cut(s) | 209 |
| MvnI | CGCG | 1 cut(s) | 71 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 221, 309, 398 |
| NdeII | GATC | 4 cut(s) | 72, 194, 343, 361 |
| NlaIII | CATG | 3 cut(s) | 232, 273, 405 |
| NlaIV | GGNNCC | 1 cut(s) | 363 |
| PfeI | GAWTC | 1 cut(s) | 52 |
| PkrI | GCNGC | 2 cut(s) | 214, 254 |
| Psp6I | CCWGG | 1 cut(s) | 207 |
| PspGI | CCWGG | 1 cut(s) | 207 |
| PspN4I | GGNNCC | 1 cut(s) | 363 |
| PsuI | RGATCY | 2 cut(s) | 343, 361 |
| PvuII | CAGCTG | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 48 |
| RsaNI | GTAC | 1 cut(s) | 47 |
| SatI | GCNGC | 2 cut(s) | 213, 253 |
| Sau3AI | GATC | 4 cut(s) | 72, 194, 343, 361 |
| ScrFI | CCNGG | 1 cut(s) | 209 |
| SetI | ASST | 6 cut(s) | 12, 45, 192, 217, 324, 389 |
| SfaNI | GCATC | 3 cut(s) | 117, 222, 239 |
| Sse9I | AATT | 1 cut(s) | 172 |
| SsiI | CCGC | 2 cut(s) | 144, 359 |
| StyD4I | CCNGG | 1 cut(s) | 207 |
| TaaI | ACNGT | 2 cut(s) | 167, 278 |
| TaiI | ACGT | 2 cut(s) | 45, 192 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TasI | AATT | 1 cut(s) | 172 |
| TfiI | GAWTC | 1 cut(s) | 52 |
| TscAI | CASTG | 2 cut(s) | 377, 399 |
| TseI | GCWGC | 2 cut(s) | 212, 252 |
| TspDTI | ATGAA | 1 cut(s) | 258 |
| TspGWI | ACGGA | 1 cut(s) | 24 |
| TspRI | CASTG | 2 cut(s) | 377, 399 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 320 |