Prupe.1G246500_v2.0.a1

Plant protein of unknown function (DUF868)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
25961537 .. 25962463
927 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G246500.1

Sequence Viewer

Length: 927 bp
ATGCATGATCCAATTGGAATTCCTGCTTGCTTTTCATCCGGTACTCAAAGGCCGGTTGATGATCCAAATCCAACGAGCGTGATCAGGGCAGGACAGAGTGTGTTCATGTCAGTGTACAGCACAAAGATAGCTGGTCAGTGCCGTCTGATCACCATCACTTGGTGCAAGAACTTGTTGCTACATGGCCTCTCTGTTTCTGTTCAAGGCCAAGATGGAGACGAAGATTATCGTTGTAAGGTTGAGCTGAAGCCGTGGTACTTTTGGAGGAAGCAAGGCTCCAAGCAATTTCTGGTGGATGGCAGCACAGTTGATGTGGTCTGGGACCTAAAAGCTGCAAAATTCAACGGAGAAACCGAGCCGCGATCGGACTATTATGTTGCTATTGTGTGTGAAGAGGAGGTGGTGTTGCTTGTTGGTGATCAAAAGAAAGATGCATACAGAAGAACAGGTTGCAGGCCATCACTCATAGAACCCATCTTGGTTTCAAGGAAGGAACATTTGTTTGGCAAGAAGAGATACTCAACAAGAATCAAGTTCCATGAAAAGGAAAGCTTTCATGAGATTTTGATTGAGTGCAACAACATCTCTGCCACTGGGGCTGATCCAGAACTGGAGATAAAGATAGATGGGAGCATAGCTCTCCATGTCAAGCACCTCCATTGGAAATTCAGAGGTAATGAGTGTGTTGATATAAACAAAACTAAAGTTGAAGTTTATTGGGATGTTCATGATTGGCTCTTCAGCTCTGGGCCAAGGCATGGAATGTTCATTTTCAAGCCAATATCATCTTCATCACCAGAAACTGCGCAGTCAACCCAAGAACAAGCGTTGACTGAAAAGTCAAGTTGTGCAGCAGAAGAAGAGGATGACAAGGCAGGTGGGTCATCTGTATTTTCCTTATTCGTTTATGCTTGGAAGGTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

309

Amino Acids

34.86

Weight (kDa)

6.09

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014723)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 866
AasI GACNNNNNNGTC 1 cut(s) 838
Acc16I TGCGCA 1 cut(s) 807
Acc36I ACCTGC 1 cut(s) 866
AccB7I CCANNNNNTGG 2 cut(s) 159, 758
AccII CGCG 1 cut(s) 361
AciI CCGC 1 cut(s) 359
AclWI GGATC 3 cut(s) 2, 56, 596
AcsI RAATTY 3 cut(s) 18, 338, 665
AcuI CTGAAG 2 cut(s) 266, 724
AdeI CACNNNGTG 1 cut(s) 162
AfaI GTAC 3 cut(s) 43, 116, 257
AfiI CCNNNNNNNGG 3 cut(s) 159, 544, 758
AgsI TTSAA 5 cut(s) 203, 343, 486, 710, 775
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 772, 804
AluBI AGCT 6 cut(s) 131, 244, 332, 552, 638, 744
AluI AGCT 6 cut(s) 131, 244, 332, 552, 638, 744
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 3 cut(s) 2, 56, 596
AlwNI CAGNNNCTG 1 cut(s) 803
AoxI GGCC 5 cut(s) 50, 184, 205, 455, 749
ApeKI GCWGC 3 cut(s) 300, 332, 851
ApoI RAATTY 3 cut(s) 18, 338, 665
Asp700I GAANNNNTTC 1 cut(s) 552
AspLEI GCGC 1 cut(s) 808
AspS9I GGNCC 2 cut(s) 322, 749
AsuHPI GGTGA 3 cut(s) 142, 428, 786
AvaII GGWCC 1 cut(s) 322
BarI GAAGNNNNNNTAC 2 cut(s) 239, 271
BbvI GCAGC 3 cut(s) 312, 319, 863
BccI CCATC 6 cut(s) 161, 206, 290, 466, 482, 620
BceAI ACGGC 2 cut(s) 126, 235
BclI TGATCA 3 cut(s) 81, 147, 418
BcoDI GTCTC 1 cut(s) 210
BfuAI ACCTGC 1 cut(s) 866
BglI GCCNNNNNGGC 1 cut(s) 596
BisI GCNGC 4 cut(s) 301, 333, 359, 852
BlsI GCNGC 4 cut(s) 302, 334, 360, 853
Bme18I GGWCC 1 cut(s) 322
BmgT120I GGNCC 2 cut(s) 322, 749
BmiI GGNNCC 2 cut(s) 277, 323
BmrI ACTGGG 1 cut(s) 603
BmsI GCATC 1 cut(s) 421
BmuI ACTGGG 1 cut(s) 603
BplI GAGNNNNNCTC 2 cut(s) 622, 654
BpmI CTGGAG 1 cut(s) 632
BsaBI GATNNNNATC 2 cut(s) 66, 152
BsaJI CCNNGG 2 cut(s) 251, 752
BsaWI WCCGGW 1 cut(s) 38
BsaXI ACNNNNNCTCC 2 cut(s) 389, 419
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 544, 758
Bse118I RCCGGY 1 cut(s) 52
Bse1I ACTGG 2 cut(s) 598, 615
Bse8I GATNNNNATC 2 cut(s) 66, 152
BseDI CCNNGG 2 cut(s) 251, 752
BseGI GGATG 4 cut(s) 35, 301, 727, 871
BseJI GATNNNNATC 2 cut(s) 66, 152
BseLI CCNNNNNNNGG 3 cut(s) 159, 544, 758
BseNI ACTGG 2 cut(s) 598, 615
BseRI GAGGAG 1 cut(s) 410
BseXI GCAGC 3 cut(s) 312, 319, 863
BsgI GTGCAG 1 cut(s) 870
Bsh1236I CGCG 1 cut(s) 361
Bsh1285I CGRYCG 1 cut(s) 365
BshFI GGCC 5 cut(s) 52, 186, 207, 457, 751
BsiEI CGRYCG 1 cut(s) 365
BsiSI CCGG 2 cut(s) 39, 53
BslFI GGGAC 1 cut(s) 335
BslI CCNNNNNNNGG 3 cut(s) 159, 544, 758
BsmAI GTCTC 1 cut(s) 210
BsmBI CGTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 335
BsnI GGCC 5 cut(s) 52, 186, 207, 457, 751
Bsp1407I TGTACA 1 cut(s) 114
Bsp143I GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
BspACI CCGC 1 cut(s) 359
BspANI GGCC 5 cut(s) 52, 186, 207, 457, 751
BspFNI CGCG 1 cut(s) 361
BspHI TCATGA 2 cut(s) 556, 727
BspLI GGNNCC 2 cut(s) 277, 323
BspMI ACCTGC 1 cut(s) 866
BspPI GGATC 3 cut(s) 2, 56, 596
BspQI GCTCTTC 1 cut(s) 743
BsrFI RCCGGY 1 cut(s) 52
BsrGI TGTACA 1 cut(s) 114
BsrI ACTGG 2 cut(s) 598, 615
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 2 cut(s) 251, 752
BssMI GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
BssT1I CCWWGG 1 cut(s) 752
Bst4CI ACNGT 1 cut(s) 307
Bst6I CTCTTC 4 cut(s) 387, 506, 743, 855
BstAUI TGTACA 1 cut(s) 114
BstC8I GCNNGC 2 cut(s) 28, 455
BstDSI CCRYGG 1 cut(s) 251
BstF5I GGATG 4 cut(s) 35, 301, 727, 871
BstFNI CGCG 1 cut(s) 361
BstHHI GCGC 1 cut(s) 808
BstKTI GATC 7 cut(s) 10, 64, 84, 150, 365, 421, 604
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
BstMCI CGRYCG 1 cut(s) 365
BstMWI GCNNNNNNNGC 1 cut(s) 596
BstUI CGCG 1 cut(s) 361
BstV1I GCAGC 3 cut(s) 312, 319, 863
BsuRI GGCC 5 cut(s) 52, 186, 207, 457, 751
BtgI CCRYGG 1 cut(s) 251
BtsCI GGATG 4 cut(s) 35, 301, 727, 871
BtsIMutI CAGTG 3 cut(s) 117, 143, 591
BveI ACCTGC 1 cut(s) 866
Cac8I GCNNGC 2 cut(s) 28, 455
CaiI CAGNNNCTG 1 cut(s) 803
CciI TCATGA 2 cut(s) 556, 727
CfoI GCGC 1 cut(s) 808
Cfr10I RCCGGY 1 cut(s) 52
Cfr13I GGNCC 2 cut(s) 322, 749
Csp6I GTAC 3 cut(s) 42, 115, 256
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviAII CATG 8 cut(s) 5, 106, 182, 539, 557, 644, 728, 758
CviQI GTAC 3 cut(s) 42, 115, 256
DpnI GATC 7 cut(s) 9, 63, 83, 149, 364, 420, 603
DpnII GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
DraIII CACNNNGTG 1 cut(s) 162
DrdI GACNNNNNNGTC 1 cut(s) 838
DseDI GACNNNNNNGTC 1 cut(s) 838
Eam1104I CTCTTC 4 cut(s) 387, 506, 743, 855
EarI CTCTTC 4 cut(s) 387, 506, 743, 855
Eco130I CCWWGG 1 cut(s) 752
Eco47I GGWCC 1 cut(s) 322
Eco57I CTGAAG 2 cut(s) 266, 724
EcoO109I RGGNCCY 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 18
EcoT14I CCWWGG 1 cut(s) 752
EcoT22I ATGCAT 2 cut(s) 6, 436
ErhI CCWWGG 1 cut(s) 752
Esp3I CGTCTC 1 cut(s) 210
FaeI CATG 8 cut(s) 8, 109, 185, 542, 560, 647, 731, 761
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 1 cut(s) 335
FatI CATG 8 cut(s) 4, 105, 181, 538, 556, 643, 727, 757
FbaI TGATCA 3 cut(s) 81, 147, 418
Fnu4HI GCNGC 4 cut(s) 301, 333, 359, 852
FokI GGATG 4 cut(s) 22, 308, 734, 878
Fsp4HI GCNGC 4 cut(s) 301, 333, 359, 852
FspI TGCGCA 1 cut(s) 807
GlaI GCGC 1 cut(s) 807
GluI GCNGC 4 cut(s) 301, 333, 359, 852
GsuI CTGGAG 1 cut(s) 632
HaeIII GGCC 5 cut(s) 52, 186, 207, 457, 751
HapII CCGG 2 cut(s) 39, 53
HhaI GCGC 1 cut(s) 808
Hin1II CATG 8 cut(s) 8, 109, 185, 542, 560, 647, 731, 761
Hin6I GCGC 1 cut(s) 806
HinP1I GCGC 1 cut(s) 806
HincII GTYRAC 2 cut(s) 813, 831
HindII GTYRAC 2 cut(s) 813, 831
HindIII AAGCTT 1 cut(s) 550
HinfI GANTC 1 cut(s) 528
HpaII CCGG 2 cut(s) 39, 53
HphI GGTGA 3 cut(s) 142, 428, 786
Hpy166II GTNNAC 3 cut(s) 115, 813, 831
Hpy188I TCNGA 3 cut(s) 147, 367, 671
Hpy188III TCNNGA 3 cut(s) 557, 605, 728
Hpy8I GTNNAC 3 cut(s) 115, 813, 831
HpyAV CCTTC 2 cut(s) 484, 910
HpyCH4III ACNGT 1 cut(s) 307
HpyCH4V TGCA 7 cut(s) 4, 165, 335, 434, 453, 576, 851
HpyF10VI GCNNNNNNNGC 1 cut(s) 596
Hsp92II CATG 8 cut(s) 8, 109, 185, 542, 560, 647, 731, 761
HspAI GCGC 1 cut(s) 806
Ksp22I TGATCA 3 cut(s) 81, 147, 418
Kzo9I GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
LguI GCTCTTC 1 cut(s) 743
LmnI GCTCC 2 cut(s) 281, 630
Lsp1109I GCAGC 3 cut(s) 312, 319, 863
LweI GCATC 1 cut(s) 421
MalI GATC 7 cut(s) 9, 63, 83, 149, 364, 420, 603
MboI GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
MboII GAAGA 8 cut(s) 233, 404, 453, 523, 730, 780, 869, 872
MfeI CAATTG 1 cut(s) 12
MluCI AATT 5 cut(s) 12, 18, 284, 338, 665
MmeI TCCRAC 1 cut(s) 95
MnlI CCTC 7 cut(s) 197, 258, 388, 391, 665, 665, 856
Mph1103I ATGCAT 2 cut(s) 6, 436
MroXI GAANNNNTTC 1 cut(s) 552
MslI CAYNNNNRTG 1 cut(s) 110
MspI CCGG 2 cut(s) 39, 53
MunI CAATTG 1 cut(s) 12
MvnI CGCG 1 cut(s) 361
MwoI GCNNNNNNNGC 1 cut(s) 596
NdeII GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
NlaIII CATG 8 cut(s) 8, 109, 185, 542, 560, 647, 731, 761
NlaIV GGNNCC 2 cut(s) 277, 323
NsbI TGCGCA 1 cut(s) 807
NsiI ATGCAT 2 cut(s) 6, 436
PagI TCATGA 2 cut(s) 556, 727
PaqCI CACCTGC 1 cut(s) 866
PciSI GCTCTTC 1 cut(s) 743
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 1 cut(s) 528
PflMI CCANNNNNTGG 2 cut(s) 159, 758
PkrI GCNGC 4 cut(s) 302, 334, 360, 853
Ple19I CGATCG 1 cut(s) 365
PpuMI RGGWCCY 1 cut(s) 322
Psp5II RGGWCCY 1 cut(s) 322
PspN4I GGNNCC 2 cut(s) 277, 323
PspPI GGNCC 2 cut(s) 322, 749
PspPPI RGGWCCY 1 cut(s) 322
PstNI CAGNNNCTG 1 cut(s) 803
PvuI CGATCG 1 cut(s) 365
RsaI GTAC 3 cut(s) 43, 116, 257
RsaNI GTAC 3 cut(s) 42, 115, 256
RseI CAYNNNNRTG 1 cut(s) 110
SapI GCTCTTC 1 cut(s) 743
SatI GCNGC 4 cut(s) 301, 333, 359, 852
Sau3AI GATC 7 cut(s) 7, 61, 81, 147, 362, 418, 601
Sau96I GGNCC 2 cut(s) 322, 749
SfaNI GCATC 1 cut(s) 421
SinI GGWCC 1 cut(s) 322
SmiMI CAYNNNNRTG 1 cut(s) 110
Sse9I AATT 5 cut(s) 12, 18, 284, 338, 665
SsiI CCGC 1 cut(s) 359
StyI CCWWGG 1 cut(s) 752
TaaI ACNGT 1 cut(s) 307
TasI AATT 5 cut(s) 12, 18, 284, 338, 665
TatI WGTACW 1 cut(s) 114
TauI GCSGC 1 cut(s) 361
TfiI GAWTC 1 cut(s) 528
TscAI CASTG 3 cut(s) 117, 143, 598
TseI GCWGC 3 cut(s) 300, 332, 851
TspDTI ATGAA 7 cut(s) 24, 94, 545, 555, 716, 757, 780
TspGWI ACGGA 1 cut(s) 360
TspRI CASTG 3 cut(s) 117, 143, 598
Van91I CCANNNNNTGG 2 cut(s) 159, 758
VpaK11BI GGWCC 1 cut(s) 322
XapI RAATTY 3 cut(s) 18, 338, 665
XcmI CCANNNNNNNNNTGG 1 cut(s) 286
XmnI GAANNNNTTC 1 cut(s) 552
Zsp2I ATGCAT 2 cut(s) 6, 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.