Prupe.1G260600_v2.0.a1

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013490
Physical Location & Seq
Reverse (-)
26949708 .. 26953567
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G260600.2

Sequence Viewer

Length: 1233 bp
ATGCCGACTAACCGATCGAAATCGGAGAAGCATGAAGCTACGAAGCAGCTCCGGCGAGACCCTTACGAGGTCCTTGGTGTCACTAGGAATTCCACCGACCAGGAAATCAAAAGCGCTTACCGAAAAATGGCTCTCAAGTACCATCCCGATAAAAATGCAAATGACCCTAAAGCAGCTGATATGTTTAAGGAGGTCACCTTTTCTTATAATATCTTGTCTGATCCAGACAAACGGCGCCAGTATGACACAGCTGGCTTTCAGGCTGTTGAATCAGAAAGTCAAGACTTGGAGCTAGATCTTTCAAGTTTGGGCGCTGTAAATACCATGTTTGCTGCCCTTTTTAGTAAACTTGGGGTGCCAATAAAGACCACCGTATCAGCTACTGTCTTGGAGGAGGCACTAAATGGCGTAGTCACAATCCGTCCACTTCCATTGGGGCAGGCTATAACAAAAAAGGTTGAAAAGCAATGTGCTCACTTCTATGCTGTTACAATAACGGAAGCGGACGCTAGGGCTGGATTTGTGTGCCAAGTGCAGTCGTCTGACAAAAGCAAGTTCAAGTTATTGTATTTTGATCAGGAAGAGACTGGTGGATTGAGCCTTTGCCTACAGGAGGACAGTGCAAAAACAGGGAAGGTTACATCTGCTGGGATGTATTTTCTCGGTTTCCCTGTATATCGGTTGGATCAAACATTGAACTCGATGGCTGCTGCAAAGGATCCTGATGCTGCATTTTTCAAAAAGCTGGATGGGTTTCAGCCATGTGAATTGACTGAACTGAAAGCAGGCACCCATGTGTTTGCTGTTTATGGTGACAATTTTTTCAAAAGTGCAAGCTACACAATAGAAGCTCTTTCTTGTGGACCTTTTACAGAAGAGAAGGAAAATTTGAGAGCCGTGGAAGCTCAAATACTAACAAAAAGAGTGGAGTTGTCGAAATTTGAAACCGAGTACAGAGAGGTTCTGGCACAATTTACAGAGATGACGTCTAGATACACACAAGAAATGCAAGAGATTGATGAGCTTCTCAGGCAGAGGAATGAAATTTATGCTTCATATACAATTGCTCCACCAATGAAGCGGAGTTCAAGTAGGAGTAGGAATAAGGGTCAGTCTAAGGAGGTCAACGAAGAAGGTCAAGTGAGAGATAAGAAATCTACATTTAGAGATCGTTCTAAGAGGAAAAAATGGTTCAACATTCACTTAAAGGTCGACAAAAGAAAACCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0033993 GO:0042221 GO:0050896 GO:0097305 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

411

Amino Acids

46.48

Weight (kDa)

8.75

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013490)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24120
fragaria_vesca FvH4_4g35120
malus_domestica MD13G1086100.v1.1 MD16G1085500.v1.1
prunus_persica Prupe.1G260600_v2.0.a1 Prupe.1G260600_v2.0.a1
pyrus_communis pycom16g07390
rosa_chinensis RchiOBHm_Chr4g0444721
rosa_laevigata RLG00000005809
rosa_multiflora Rmu_sc0012443.1_g000009
rosa_roxburghii Rroxscaffold_5G00385230
rosa_rugosa Rorug04G0354700 Rorug04G0354800 Rorug04G0354900
rosa_samantha Rh4BG426600 Rh4CG441400 Rh4DG422400
rosa_wichuraiana Rw4G035650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AatII GACGTC 1 cut(s) 989
AccB1I GGYRCC 3 cut(s) 234, 355, 788
AccI GTMKAC 1 cut(s) 1212
AciI CCGC 2 cut(s) 503, 1081
AclWI GGATC 4 cut(s) 215, 693, 713, 726
AcsI RAATTY 4 cut(s) 88, 886, 938, 1044
AcyI GRCGYC 2 cut(s) 235, 986
AfaI GTAC 2 cut(s) 140, 953
AfeI AGCGCT 1 cut(s) 115
AfiI CCNNNNNNNGG 3 cut(s) 67, 127, 613
AjnI CCWGG 1 cut(s) 99
AleI CACNNNNGTG 1 cut(s) 794
Alw21I GWGCWC 1 cut(s) 475
Alw26I GTCTC 2 cut(s) 51, 578
AlwI GGATC 4 cut(s) 215, 693, 713, 726
AlwNI CAGNNNCTG 1 cut(s) 383
Aor51HI AGCGCT 1 cut(s) 115
ApeKI GCWGC 6 cut(s) 46, 173, 332, 707, 710, 728
ApoI RAATTY 4 cut(s) 88, 886, 938, 1044
AspLEI GCGC 3 cut(s) 116, 237, 314
AspS9I GGNCC 2 cut(s) 70, 863
AsuHPI GGTGA 2 cut(s) 187, 824
AvaII GGWCC 2 cut(s) 70, 863
BaeI ACNNNNGTAYC 2 cut(s) 357, 390
BamHI GGATCC 1 cut(s) 718
BanI GGYRCC 3 cut(s) 234, 355, 788
BarI GAAGNNNNNNTAC 2 cut(s) 894, 926
Bbv12I GWGCWC 1 cut(s) 475
BbvI GCAGC 6 cut(s) 58, 185, 319, 694, 697, 715
BccI CCATC 3 cut(s) 150, 697, 743
BceAI ACGGC 2 cut(s) 248, 881
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BciT130I CCWGG 1 cut(s) 101
BclI TGATCA 1 cut(s) 574
BcoDI GTCTC 2 cut(s) 51, 578
BfaI CTAG 4 cut(s) 84, 293, 510, 990
BfmI CTRYAG 1 cut(s) 608
BfoI RGCGCY 3 cut(s) 117, 238, 315
BglII AGATCT 1 cut(s) 295
BisI GCNGC 6 cut(s) 47, 174, 333, 708, 711, 729
BlsI GCNGC 6 cut(s) 48, 175, 334, 709, 712, 730
Bme1390I CCNGG 1 cut(s) 101
Bme18I GGWCC 2 cut(s) 70, 863
BmgT120I GGNCC 2 cut(s) 70, 863
BmiI GGNNCC 4 cut(s) 236, 357, 720, 790
BmrFI CCNGG 1 cut(s) 101
BmsI GCATC 1 cut(s) 715
BpuEI CTTGAG 1 cut(s) 119
BsaBI GATNNNNATC 1 cut(s) 19
BsaHI GRCGYC 2 cut(s) 235, 986
BsaI GGTCTC 1 cut(s) 51
BsaJI CCNNGG 2 cut(s) 73, 897
BsaXI ACNNNNNCTCC 4 cut(s) 1051, 1075, 1081, 1105
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 127, 613
Bse1I ACTGG 2 cut(s) 238, 592
Bse3DI GCAATG 1 cut(s) 473
Bse8I GATNNNNATC 1 cut(s) 19
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 2 cut(s) 73, 897
BseGI GGATG 3 cut(s) 142, 657, 754
BseJI GATNNNNATC 1 cut(s) 19
BseLI CCNNNNNNNGG 3 cut(s) 67, 127, 613
BseMI GCAATG 1 cut(s) 473
BseMII CTCAG 1 cut(s) 1042
BseNI ACTGG 2 cut(s) 238, 592
BseRI GAGGAG 1 cut(s) 407
BseXI GCAGC 6 cut(s) 58, 185, 319, 694, 697, 715
BseYI CCCAGC 1 cut(s) 647
BsgI GTGCAG 1 cut(s) 554
Bsh1285I CGRYCG 1 cut(s) 17
BshNI GGYRCC 3 cut(s) 234, 355, 788
BsiEI CGRYCG 1 cut(s) 17
BsiHKAI GWGCWC 1 cut(s) 475
BsiSI CCGG 1 cut(s) 52
BslI CCNNNNNNNGG 3 cut(s) 67, 127, 613
BsmAI GTCTC 2 cut(s) 51, 578
Bso31I GGTCTC 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 475
Bsp143I GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
BspACI CCGC 2 cut(s) 503, 1081
BspCNI CTCAG 1 cut(s) 1041
BspLI GGNNCC 4 cut(s) 236, 357, 720, 790
BspPI GGATC 4 cut(s) 215, 693, 713, 726
BspT107I GGYRCC 3 cut(s) 234, 355, 788
BspTNI GGTCTC 1 cut(s) 51
BsrDI GCAATG 1 cut(s) 473
BsrI ACTGG 2 cut(s) 238, 592
BssECI CCNNGG 2 cut(s) 73, 897
BssMI GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
BssNI GRCGYC 2 cut(s) 235, 986
BssT1I CCWWGG 1 cut(s) 73
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 3 cut(s) 373, 385, 620
Bst6I CTCTTC 2 cut(s) 576, 870
BstACI GRCGYC 2 cut(s) 235, 986
BstC8I GCNNGC 4 cut(s) 253, 441, 787, 835
BstDEI CTNAG 3 cut(s) 1028, 1116, 1176
BstDSI CCRYGG 1 cut(s) 897
BstEII GGTNACC 1 cut(s) 193
BstENI CCTNNNNNAGG 1 cut(s) 611
BstF5I GGATG 3 cut(s) 142, 657, 754
BstH2I RGCGCY 3 cut(s) 117, 238, 315
BstHHI GCGC 3 cut(s) 116, 237, 314
BstKTI GATC 7 cut(s) 17, 223, 298, 577, 688, 721, 1171
BstMAI GTCTC 2 cut(s) 51, 578
BstMBI GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
BstMCI CGRYCG 1 cut(s) 17
BstMWI GCNNNNNNNGC 3 cut(s) 52, 902, 1030
BstNI CCWGG 1 cut(s) 101
BstPI GGTNACC 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 99
BstSFI CTRYAG 1 cut(s) 608
BstV1I GCAGC 6 cut(s) 58, 185, 319, 694, 697, 715
BstX2I RGATCY 2 cut(s) 295, 718
BstYI RGATCY 2 cut(s) 295, 718
BtgI CCRYGG 1 cut(s) 897
BtsCI GGATG 3 cut(s) 142, 657, 754
BtsIMutI CAGTG 1 cut(s) 625
Cac8I GCNNGC 4 cut(s) 253, 441, 787, 835
CaiI CAGNNNCTG 1 cut(s) 383
CfoI GCGC 3 cut(s) 116, 237, 314
Cfr13I GGNCC 2 cut(s) 70, 863
CseI GACGC 1 cut(s) 515
Csp6I GTAC 2 cut(s) 139, 952
CspCI CAANNNNNGTGG 4 cut(s) 414, 449, 906, 941
CviAII CATG 4 cut(s) 32, 325, 762, 794
CviQI GTAC 2 cut(s) 139, 952
DdeI CTNAG 3 cut(s) 1028, 1116, 1176
DinI GGCGCC 1 cut(s) 236
DpnI GATC 7 cut(s) 16, 222, 297, 576, 687, 720, 1170
DpnII GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
Eam1104I CTCTTC 2 cut(s) 576, 870
EarI CTCTTC 2 cut(s) 576, 870
Eco130I CCWWGG 1 cut(s) 73
Eco31I GGTCTC 1 cut(s) 51
Eco47I GGWCC 2 cut(s) 70, 863
Eco47III AGCGCT 1 cut(s) 115
Eco91I GGTNACC 1 cut(s) 193
EcoNI CCTNNNNNAGG 1 cut(s) 611
EcoO109I RGGNCCY 1 cut(s) 70
EcoO65I GGTNACC 1 cut(s) 193
EcoRI GAATTC 1 cut(s) 88
EcoRII CCWGG 1 cut(s) 99
EcoT14I CCWWGG 1 cut(s) 73
EgeI GGCGCC 1 cut(s) 236
EheI GGCGCC 1 cut(s) 236
ErhI CCWWGG 1 cut(s) 73
FaeI CATG 4 cut(s) 35, 328, 765, 797
FalI AAGNNNNNCTT 1 cut(s) 1210
FatI CATG 4 cut(s) 31, 324, 761, 793
FbaI TGATCA 1 cut(s) 574
FblI GTMKAC 1 cut(s) 1212
Fnu4HI GCNGC 6 cut(s) 47, 174, 333, 708, 711, 729
FokI GGATG 3 cut(s) 129, 664, 761
Fsp4HI GCNGC 6 cut(s) 47, 174, 333, 708, 711, 729
FspBI CTAG 4 cut(s) 84, 293, 510, 990
GlaI GCGC 3 cut(s) 115, 236, 313
GluI GCNGC 6 cut(s) 47, 174, 333, 708, 711, 729
GsaI CCCAGC 1 cut(s) 651
HaeII RGCGCY 3 cut(s) 117, 238, 315
HapII CCGG 1 cut(s) 52
HgaI GACGC 1 cut(s) 515
HhaI GCGC 3 cut(s) 116, 237, 314
Hin1I GRCGYC 2 cut(s) 235, 986
Hin1II CATG 4 cut(s) 35, 328, 765, 797
Hin6I GCGC 3 cut(s) 114, 235, 312
HinP1I GCGC 3 cut(s) 114, 235, 312
HincII GTYRAC 2 cut(s) 1126, 1213
HindII GTYRAC 2 cut(s) 1126, 1213
HinfI GANTC 1 cut(s) 269
HpaII CCGG 1 cut(s) 52
HphI GGTGA 2 cut(s) 187, 824
Hpy166II GTNNAC 5 cut(s) 347, 425, 863, 1126, 1213
Hpy188I TCNGA 4 cut(s) 25, 220, 274, 544
Hpy188III TCNNGA 6 cut(s) 146, 224, 281, 578, 722, 990
Hpy8I GTNNAC 5 cut(s) 347, 425, 863, 1126, 1213
HpyAV CCTTC 3 cut(s) 628, 874, 1127
HpyCH4III ACNGT 3 cut(s) 373, 385, 620
HpyCH4IV ACGT 1 cut(s) 986
HpyCH4V TGCA 7 cut(s) 158, 535, 623, 713, 731, 833, 1009
HpyF10VI GCNNNNNNNGC 3 cut(s) 52, 902, 1030
HpyF3I CTNAG 3 cut(s) 1028, 1116, 1176
HpySE526I ACGT 1 cut(s) 986
Hsp92I GRCGYC 2 cut(s) 235, 986
Hsp92II CATG 4 cut(s) 35, 328, 765, 797
HspAI GCGC 3 cut(s) 114, 235, 312
KasI GGCGCC 1 cut(s) 234
Ksp22I TGATCA 1 cut(s) 574
Kzo9I GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
LmnI GCTCC 3 cut(s) 54, 289, 1072
Lsp1109I GCAGC 6 cut(s) 58, 185, 319, 694, 697, 715
LweI GCATC 1 cut(s) 715
MaeI CTAG 4 cut(s) 84, 293, 510, 990
MaeII ACGT 1 cut(s) 986
MaeIII GTNAC 6 cut(s) 79, 193, 412, 487, 637, 812
MalI GATC 7 cut(s) 16, 222, 297, 576, 687, 720, 1170
MboI GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
MboII GAAGA 3 cut(s) 593, 887, 1142
MfeI CAATTG 1 cut(s) 1062
MflI RGATCY 2 cut(s) 295, 718
MhlI GDGCHC 1 cut(s) 475
MluCI AATT 8 cut(s) 88, 767, 817, 886, 938, 971, 1044, 1062
Mly113I GGCGCC 1 cut(s) 235
MmeI TCCRAC 1 cut(s) 663
MnlI CCTC 9 cut(s) 61, 184, 385, 388, 607, 952, 1029, 1114, 1173
MseI TTAA 2 cut(s) 186, 1205
MslI CAYNNNNRTG 2 cut(s) 480, 794
MspA1I CMGCKG 2 cut(s) 176, 251
MspI CCGG 1 cut(s) 52
MspR9I CCNGG 1 cut(s) 101
MunI CAATTG 1 cut(s) 1062
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 3 cut(s) 52, 902, 1030
NarI GGCGCC 1 cut(s) 235
NdeII GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
NlaIII CATG 4 cut(s) 35, 328, 765, 797
NlaIV GGNNCC 4 cut(s) 236, 357, 720, 790
NmuCI GTSAC 4 cut(s) 79, 193, 412, 812
OliI CACNNNNGTG 1 cut(s) 794
PfeI GAWTC 1 cut(s) 269
PkrI GCNGC 6 cut(s) 48, 175, 334, 709, 712, 730
Ple19I CGATCG 1 cut(s) 17
PluTI GGCGCC 1 cut(s) 238
PpuMI RGGWCCY 1 cut(s) 70
PsiI TTATAA 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 70
Psp6I CCWGG 1 cut(s) 99
PspEI GGTNACC 1 cut(s) 193
PspFI CCCAGC 1 cut(s) 647
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 4 cut(s) 236, 357, 720, 790
PspPI GGNCC 2 cut(s) 70, 863
PspPPI RGGWCCY 1 cut(s) 70
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 2 cut(s) 295, 718
PvuI CGATCG 1 cut(s) 17
PvuII CAGCTG 2 cut(s) 176, 251
RsaI GTAC 2 cut(s) 140, 953
RsaNI GTAC 2 cut(s) 139, 952
RseI CAYNNNNRTG 2 cut(s) 480, 794
SalI GTCGAC 1 cut(s) 1211
SaqAI TTAA 2 cut(s) 186, 1205
SatI GCNGC 6 cut(s) 47, 174, 333, 708, 711, 729
Sau3AI GATC 7 cut(s) 14, 220, 295, 574, 685, 718, 1168
Sau96I GGNCC 2 cut(s) 70, 863
ScrFI CCNGG 1 cut(s) 101
SduI GDGCHC 1 cut(s) 475
SfaNI GCATC 1 cut(s) 715
SfcI CTRYAG 1 cut(s) 608
SfoI GGCGCC 1 cut(s) 236
SinI GGWCC 2 cut(s) 70, 863
SmiMI CAYNNNNRTG 2 cut(s) 480, 794
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
Sse9I AATT 8 cut(s) 88, 767, 817, 886, 938, 971, 1044, 1062
SsiI CCGC 2 cut(s) 503, 1081
SspDI GGCGCC 1 cut(s) 234
SspMI CTAG 4 cut(s) 84, 293, 510, 990
StyD4I CCNGG 1 cut(s) 99
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 3 cut(s) 373, 385, 620
TaiI ACGT 1 cut(s) 989
TaqI TCGA 4 cut(s) 17, 701, 935, 1212
TasI AATT 8 cut(s) 88, 767, 817, 886, 938, 971, 1044, 1062
TatI WGTACW 1 cut(s) 951
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 2 cut(s) 186, 1205
Tru9I TTAA 2 cut(s) 186, 1205
TscAI CASTG 1 cut(s) 625
TseFI GTSAC 4 cut(s) 79, 193, 412, 812
TseI GCWGC 6 cut(s) 46, 173, 332, 707, 710, 728
Tsp45I GTSAC 4 cut(s) 79, 193, 412, 812
TspDTI ATGAA 4 cut(s) 48, 1044, 1056, 1091
TspGWI ACGGA 2 cut(s) 410, 512
TspRI CASTG 1 cut(s) 625
VpaK11BI GGWCC 2 cut(s) 70, 863
XagI CCTNNNNNAGG 1 cut(s) 611
XapI RAATTY 4 cut(s) 88, 886, 938, 1044
XbaI TCTAGA 1 cut(s) 989
XmiI GTMKAC 1 cut(s) 1212
XspI CTAG 4 cut(s) 84, 293, 510, 990
ZraI GACGTC 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.