Prupe.1G298200_v2.0.a1
BZIP Family

basic region leucin zipper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012846
Physical Location & Seq
Forward (+)
29410282 .. 29411546
1265 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G298200.1

Sequence Viewer

Length: 615 bp
ATGCTTCCAGGTGAGATCATTTCAGGTCTCCACTACCTAGCACCTGAAACCCCAATTCCAGATCCTGCTCACTTTGGCATCATGCAGAACAACATGTCCTCCCTCCATTTCAATACTCTCTTTAACAATTTATCCCAAGCTCAAAACTTTCCTGCAGGCCATGAATTCACTCAGCAATCTTCAAGCCTCAGCAACAACTCCAGTACTTCTGATGACGCTGAAGAACACCAGCACCTCAGAATCATTGATGAGAGGAAGCAGAGGAGAATGATATCCAATAGAGAATCGGCTCGGCGATCGCGGATGAGGAAGCAGAAACACCTGGATGAGCTCTGGTCACAGGTGGTCAGACTGAGAAATGAGAACCAGAGTCTGATAGACAGGTTAAACTATGTGTCAGAGAGCCATGACAGGGTTGTGCAGGAGAACACTAAGCTCAAGGAAGAAGCTTCTGATCTTCGCCAAACGCTCACAAACCTTCAAATTGGCAGCCCTTATAATATTAATGCTACCACCTTCAGAGAGCTGGAACCCGAGGTGCCCTGCAACACAGCTCATCTCAGAGCTGAATCTTCAAACCAATCCATTGCTGCATCAGCTGACTTGCTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

205

Amino Acids

23.33

Weight (kDa)

6.05

Isoelectric Point (pI)

58.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012846)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13600 AT2G04038
fragaria_vesca FvH4_4g28780
malus_domestica MD13G1053800.v1.1 MD16G1052300.v1.1
prunus_persica Prupe.1G298200_v2.0.a1
pyrus_communis pycom13g04800 pycom16g04590
rosa_chinensis RchiOBHm_Chr4g0436911
rosa_laevigata RLG00000006488
rosa_multiflora Rmu_sc0001464.1_g000012
rosa_roxburghii Rroxscaffold_5G00377960
rosa_rugosa Rorug04G0297100
rosa_samantha Rh4AG351600 Rh4BG360400 Rh4CG374700 Rh4DG354800
rosa_wichuraiana Rw4G030770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 498
AccB1I GGYRCC 1 cut(s) 538
AccII CGCG 1 cut(s) 301
AciI CCGC 1 cut(s) 301
AclWI GGATC 1 cut(s) 56
AcsI RAATTY 1 cut(s) 164
AcuI CTGAAG 2 cut(s) 240, 502
AfaI GTAC 1 cut(s) 205
AfiI CCNNNNNNNGG 1 cut(s) 412
AflIII ACRYGT 1 cut(s) 93
AgsI TTSAA 4 cut(s) 112, 183, 482, 576
AjnI CCWGG 2 cut(s) 7, 321
AloI GAACNNNNNNTCC 2 cut(s) 80, 112
AluBI AGCT 8 cut(s) 140, 331, 436, 449, 526, 554, 566, 599
AluI AGCT 8 cut(s) 140, 331, 436, 449, 526, 554, 566, 599
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 1 cut(s) 32
AlwI GGATC 1 cut(s) 56
AlwNI CAGNNNCTG 2 cut(s) 65, 373
Ama87I CYCGRG 1 cut(s) 533
AoxI GGCC 1 cut(s) 157
ApeKI GCWGC 2 cut(s) 489, 590
ApoI RAATTY 1 cut(s) 164
AseI ATTAAT 1 cut(s) 504
AsiSI GCGATCGC 1 cut(s) 299
AsuHPI GGTGA 1 cut(s) 23
AvaI CYCGRG 1 cut(s) 533
BaeGI GKGCMC 1 cut(s) 543
BanI GGYRCC 1 cut(s) 538
BanII GRGCYC 1 cut(s) 333
Bbv12I GWGCWC 1 cut(s) 333
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 2 cut(s) 501, 577
BciT130I CCWGG 2 cut(s) 9, 323
BcoDI GTCTC 1 cut(s) 32
BfaI CTAG 1 cut(s) 38
BfmI CTRYAG 1 cut(s) 153
BisI GCNGC 2 cut(s) 490, 591
BlsI GCNGC 2 cut(s) 491, 592
BmcAI AGTACT 1 cut(s) 205
Bme1390I CCNGG 2 cut(s) 9, 323
BmeT110I CYCGRG 1 cut(s) 533
BmiI GGNNCC 2 cut(s) 531, 540
BmrFI CCNGG 2 cut(s) 9, 323
BmsI GCATC 2 cut(s) 87, 602
BpmI CTGGAG 1 cut(s) 184
Bpu10I CCTNAGC 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 422
BsaI GGTCTC 1 cut(s) 32
BsaJI CCNNGG 1 cut(s) 534
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 1 cut(s) 412
Bse1I ACTGG 1 cut(s) 201
Bse3DI GCAATG 1 cut(s) 585
BseBI CCWGG 2 cut(s) 9, 323
BseDI CCNNGG 1 cut(s) 534
BseGI GGATG 2 cut(s) 309, 331
BseLI CCNNNNNNNGG 1 cut(s) 412
BseMI GCAATG 1 cut(s) 585
BseMII CTCAG 5 cut(s) 185, 202, 250, 344, 574
BseNI ACTGG 1 cut(s) 201
BseRI GAGGAG 1 cut(s) 277
BseSI GKGCMC 1 cut(s) 543
BseXI GCAGC 2 cut(s) 501, 577
BsgI GTGCAG 1 cut(s) 440
Bsh1236I CGCG 1 cut(s) 301
Bsh1285I CGRYCG 1 cut(s) 299
BshFI GGCC 1 cut(s) 159
BshNI GGYRCC 1 cut(s) 538
BsiEI CGRYCG 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 533
BslI CCNNNNNNNGG 1 cut(s) 412
BsmAI GTCTC 1 cut(s) 32
BsnI GGCC 1 cut(s) 159
Bso31I GGTCTC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 533
Bsp1286I GDGCHC 2 cut(s) 333, 543
Bsp143I GATC 4 cut(s) 15, 61, 296, 454
BspACI CCGC 1 cut(s) 301
BspANI GGCC 1 cut(s) 159
BspCNI CTCAG 5 cut(s) 184, 201, 249, 345, 573
BspFNI CGCG 1 cut(s) 301
BspLI GGNNCC 2 cut(s) 531, 540
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 1 cut(s) 56
BspT107I GGYRCC 1 cut(s) 538
BspTNI GGTCTC 1 cut(s) 32
BsrDI GCAATG 1 cut(s) 585
BsrI ACTGG 1 cut(s) 201
BssECI CCNNGG 1 cut(s) 534
BssMI GATC 4 cut(s) 15, 61, 296, 454
Bst2UI CCWGG 2 cut(s) 9, 323
BstC8I GCNNGC 1 cut(s) 157
BstDEI CTNAG 6 cut(s) 171, 188, 236, 353, 432, 560
BstF5I GGATG 2 cut(s) 309, 331
BstFNI CGCG 1 cut(s) 301
BstKTI GATC 4 cut(s) 18, 64, 299, 457
BstMAI GTCTC 1 cut(s) 32
BstMBI GATC 4 cut(s) 15, 61, 296, 454
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 1 cut(s) 596
BstNI CCWGG 2 cut(s) 9, 323
BstNSI RCATGY 1 cut(s) 97
BstSCI CCNGG 2 cut(s) 7, 321
BstSFI CTRYAG 1 cut(s) 153
BstSLI GKGCMC 1 cut(s) 543
BstUI CGCG 1 cut(s) 301
BstV1I GCAGC 2 cut(s) 501, 577
BstX2I RGATCY 1 cut(s) 61
BstYI RGATCY 1 cut(s) 61
BsuRI GGCC 1 cut(s) 159
BtsCI GGATG 2 cut(s) 309, 331
Cac8I GCNNGC 1 cut(s) 157
CaiI CAGNNNCTG 2 cut(s) 65, 373
CseI GACGC 1 cut(s) 224
Csp6I GTAC 1 cut(s) 204
CviAII CATG 4 cut(s) 82, 94, 161, 407
CviQI GTAC 1 cut(s) 204
DdeI CTNAG 6 cut(s) 171, 188, 236, 353, 432, 560
DpnI GATC 4 cut(s) 17, 63, 298, 456
DpnII GATC 4 cut(s) 15, 61, 296, 454
Ecl136II GAGCTC 1 cut(s) 331
Eco24I GRGCYC 1 cut(s) 333
Eco31I GGTCTC 1 cut(s) 32
Eco32I GATATC 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 2 cut(s) 240, 502
Eco88I CYCGRG 1 cut(s) 533
EcoICRI GAGCTC 1 cut(s) 331
EcoRI GAATTC 1 cut(s) 164
EcoRII CCWGG 2 cut(s) 7, 321
EcoRV GATATC 1 cut(s) 273
EcoT38I GRGCYC 1 cut(s) 333
FaeI CATG 4 cut(s) 85, 97, 164, 410
FaiI YATR 6 cut(s) 83, 95, 162, 393, 408, 498
FatI CATG 4 cut(s) 81, 93, 160, 406
Fnu4HI GCNGC 2 cut(s) 490, 591
FokI GGATG 2 cut(s) 316, 338
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 2 cut(s) 490, 591
FspBI CTAG 1 cut(s) 38
GluI GCNGC 2 cut(s) 490, 591
GsuI CTGGAG 1 cut(s) 184
HaeIII GGCC 1 cut(s) 159
HgaI GACGC 1 cut(s) 224
Hin1II CATG 4 cut(s) 85, 97, 164, 410
HindIII AAGCTT 1 cut(s) 447
HinfI GANTC 4 cut(s) 240, 284, 370, 569
HphI GGTGA 1 cut(s) 23
Hpy188I TCNGA 8 cut(s) 211, 239, 350, 375, 400, 454, 521, 563
Hpy188III TCNNGA 1 cut(s) 59
HpyAV CCTTC 2 cut(s) 488, 526
HpyCH4V TGCA 5 cut(s) 85, 155, 421, 546, 593
HpyF10VI GCNNNNNNNGC 1 cut(s) 596
HpyF3I CTNAG 6 cut(s) 171, 188, 236, 353, 432, 560
Hsp92II CATG 4 cut(s) 85, 97, 164, 410
Kzo9I GATC 4 cut(s) 15, 61, 296, 454
LmnI GCTCC 1 cut(s) 612
Lsp1109I GCAGC 2 cut(s) 501, 577
LweI GCATC 2 cut(s) 87, 602
MaeI CTAG 1 cut(s) 38
MaeIII GTNAC 1 cut(s) 336
MalI GATC 4 cut(s) 17, 63, 298, 456
MboI GATC 4 cut(s) 15, 61, 296, 454
MboII GAAGA 5 cut(s) 171, 233, 449, 455, 564
MflI RGATCY 1 cut(s) 61
MhlI GDGCHC 2 cut(s) 333, 543
MluCI AATT 4 cut(s) 54, 127, 164, 483
MlyI GAGTC 1 cut(s) 379
MnlI CCTC 8 cut(s) 109, 113, 197, 245, 246, 255, 300, 529
MseI TTAA 3 cut(s) 123, 386, 504
MslI CAYNNNNRTG 1 cut(s) 324
MspA1I CMGCKG 1 cut(s) 599
MspR9I CCNGG 2 cut(s) 9, 323
MvaI CCWGG 2 cut(s) 9, 323
MvnI CGCG 1 cut(s) 301
MwoI GCNNNNNNNGC 1 cut(s) 596
NdeII GATC 4 cut(s) 15, 61, 296, 454
NlaIII CATG 4 cut(s) 85, 97, 164, 410
NlaIV GGNNCC 2 cut(s) 531, 540
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 1 cut(s) 336
NspI RCATGY 1 cut(s) 97
PciI ACATGT 1 cut(s) 93
PfeI GAWTC 3 cut(s) 240, 284, 569
PkrI GCNGC 2 cut(s) 491, 592
Ple19I CGATCG 1 cut(s) 299
PleI GAGTC 1 cut(s) 378
PpsI GAGTC 1 cut(s) 378
PscI ACATGT 1 cut(s) 93
PshBI ATTAAT 1 cut(s) 504
PsiI TTATAA 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 2 cut(s) 7, 321
PspGI CCWGG 2 cut(s) 7, 321
PspN4I GGNNCC 2 cut(s) 531, 540
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 2 cut(s) 65, 373
PsuI RGATCY 1 cut(s) 61
PvuI CGATCG 1 cut(s) 299
PvuII CAGCTG 1 cut(s) 599
RgaI GCGATCGC 1 cut(s) 299
RsaI GTAC 1 cut(s) 205
RsaNI GTAC 1 cut(s) 204
RseI CAYNNNNRTG 1 cut(s) 324
SacI GAGCTC 1 cut(s) 333
SaqAI TTAA 3 cut(s) 123, 386, 504
SatI GCNGC 2 cut(s) 490, 591
Sau3AI GATC 4 cut(s) 15, 61, 296, 454
SbfI CCTGCAGG 1 cut(s) 157
ScaI AGTACT 1 cut(s) 205
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 2 cut(s) 9, 323
SdaI CCTGCAGG 1 cut(s) 157
SduI GDGCHC 2 cut(s) 333, 543
SfaAI GCGATCGC 1 cut(s) 299
SfaNI GCATC 2 cut(s) 87, 602
SfcI CTRYAG 1 cut(s) 153
SgfI GCGATCGC 1 cut(s) 299
SmiMI CAYNNNNRTG 1 cut(s) 324
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
Sse8387I CCTGCAGG 1 cut(s) 157
Sse9I AATT 4 cut(s) 54, 127, 164, 483
SsiI CCGC 1 cut(s) 301
SspI AATATT 1 cut(s) 502
SspMI CTAG 1 cut(s) 38
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 2 cut(s) 7, 321
TasI AATT 4 cut(s) 54, 127, 164, 483
TatI WGTACW 1 cut(s) 203
TfiI GAWTC 3 cut(s) 240, 284, 569
Tru1I TTAA 3 cut(s) 123, 386, 504
Tru9I TTAA 3 cut(s) 123, 386, 504
TseFI GTSAC 1 cut(s) 336
TseI GCWGC 2 cut(s) 489, 590
Tsp45I GTSAC 1 cut(s) 336
TspDTI ATGAA 1 cut(s) 177
VspI ATTAAT 1 cut(s) 504
XapI RAATTY 1 cut(s) 164
XceI RCATGY 1 cut(s) 97
XspI CTAG 1 cut(s) 38
ZrmI AGTACT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.