Prupe.1G339900_v2.0.a1

Belongs to the group II decarboxylase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
31986049 .. 31989109
3061 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G339900.1

Sequence Viewer

Length: 1479 bp
ATGGGCCTCTCAAAAACATTCTCAGCGTCCGATGTCTCTGTCCACTCAACCTATGCCTCTCGCTATATCCGAGACTCACCTGCTAAGTATAAGATGCCGGAGAATTCAACGCCAAAGGACGTGGCGTTCCAGATGATCAATGACGAGCTGATGCTTGATGGGAAGCCAAGGCTCAACTTGGCTTCGTTTGTGACAACATGGATGGAGCCAGAGTGCGAGAAGCTTATCATGGATTCCCTGAACAAGAACTATGTTGACATGGATGAGTACCCTGTTACCACTGAGCTTCAGAATCGGTGCGTGAACATGATAGCAGATCTATTCCATGCACCGCATGAAGACGGTGAGGCTGCGACTGGAACAGGAACAGTAGGATCATCGGAGGCCATAATGCTGGCAGGCCTTGCATTCAAGAGAAAGTGGCAAAACAAGATGAAGGCTCAAGGCAAGCCTTACGATAAGCCTAACATTGTCACTGGTGCCAATGTCCAGGTATGCTGGGAGAAGTTTGCAAGGTATTTTGAAGTAGAACTGAAGGAAGTGAAAGTGAGGGAAGACTATTATGTAATGGACCCTGTCAAGGCTGTGGAGATGGTGGATGAAAACACCATCTGCGTTGCTGCTATTTTGGGATCAACTTACAATGGAGAATTCGAAGATGTGAAGCTCTTGAATGATCTCTTGCTGGAAAAGAACAAGCAAACTGGATGGGATACCCCAATTCATGTCGACGCTGCCAGTGGTGGGTTCATTGCACCATTCTTGTATCCTGATCTTGAATGGGACTTCCGTCTTCCACTGGTGAAGAGCATCAATGTCAGCGGCCACAAGTATGGCCTTGTTTATGCTGGAATCGGGTGGATTGTTTGGAGGGCCAAAGAAGACTTGCCTGAAGACCTTATCTTCCACATCAATTACCTTGGAGCTGACCAGCCCACCTTCACCCTCAATTTCTCTAAAAGTTCTAGCCAGATTATTGCTCAATATTATCAGCTTATCCGATTGGGTTTTGAGGGATACCGTAATATCATGGAGAATTGTCAGAACAATGCAATGGTGCTAAAAGCCGGGCTGATAAAAACAGAACGCTTTAAGATTTTGTCAAAGGACATCGGGGTTCCAGTGGTGGCTTTTTCTCTCAAGAATAGAAGCCGTTACAATGAGTTTAAGGTGTCTGAAAATTTGCGTCGGTCCGGTTGGATTGTGCCTGCATATTCCATGCCGGCGGACGCTAAGCATGTGGCCTTGCTCCGTGTTGTCATAAGGGAAGACTTCTCTTGCACTCTTGCTGAGCGACTTGTCTCTGATATTACTCACGTCCTGCAAGAGCTCGATATGCTGCATCCAGCTGCTCCTCCTGCCATTGAAAATGGTCATCTCAAAGTGGCTGCAAATGGCCTCCTCAAAGTGCCTGCAAATGGTGTTGCAAACTGTGATCACAAAGTGGCTGCAAATGGTGTTGCAAATGGGAAGGCATAG

Protein Analysis

493

Amino Acids

55.08

Weight (kDa)

5.94

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 88
Acc36I ACCTGC 1 cut(s) 88
AccB1I GGYRCC 1 cut(s) 479
AccI GTMKAC 1 cut(s) 729
AciI CCGC 3 cut(s) 332, 822, 1226
AclWI GGATC 2 cut(s) 382, 640
AcoI YGGCCR 1 cut(s) 823
AcsI RAATTY 3 cut(s) 103, 650, 1180
AcuI CTGAAG 3 cut(s) 272, 554, 912
AdeI CACNNNGTG 1 cut(s) 1444
AfaI GTAC 1 cut(s) 269
AfiI CCNNNNNNNGG 3 cut(s) 580, 744, 1418
AgsI TTSAA 6 cut(s) 108, 412, 524, 673, 779, 1367
AjiI CACGTC 2 cut(s) 121, 1318
AjnI CCWGG 1 cut(s) 489
AloI GAACNNNNNNTCC 2 cut(s) 110, 142
AluBI AGCT 8 cut(s) 148, 223, 286, 667, 926, 994, 1330, 1349
AluI AGCT 8 cut(s) 148, 223, 286, 667, 926, 994, 1330, 1349
Alw21I GWGCWC 1 cut(s) 1332
Alw26I GTCTC 3 cut(s) 40, 66, 1306
AlwI GGATC 2 cut(s) 382, 640
AoxI GGCC 8 cut(s) 4, 384, 400, 823, 835, 873, 1242, 1396
ApeKI GCWGC 7 cut(s) 350, 620, 734, 1339, 1349, 1388, 1448
ApoI RAATTY 3 cut(s) 103, 650, 1180
AspS9I GGNCC 4 cut(s) 4, 571, 873, 1191
AsuC2I CCSGG 1 cut(s) 1069
AsuHPI GGTGA 4 cut(s) 69, 356, 814, 934
AsuII TTCGAA 1 cut(s) 654
AvaII GGWCC 2 cut(s) 571, 1191
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 1 cut(s) 1332
BbsI GAAGAC 6 cut(s) 345, 561, 785, 888, 900, 1275
Bbv12I GWGCWC 1 cut(s) 1332
BbvI GCAGC 7 cut(s) 337, 607, 721, 1326, 1336, 1375, 1435
BccI CCATC 5 cut(s) 152, 196, 586, 617, 702
BceAI ACGGC 1 cut(s) 1137
BciT130I CCWGG 1 cut(s) 491
BciVI GTATCC 3 cut(s) 706, 777, 1010
BclI TGATCA 2 cut(s) 135, 1435
BcnI CCSGG 1 cut(s) 1069
BcoDI GTCTC 3 cut(s) 40, 66, 1306
BfaI CTAG 1 cut(s) 966
BfuAI ACCTGC 1 cut(s) 88
BfuI GTATCC 3 cut(s) 706, 777, 1010
BglII AGATCT 1 cut(s) 316
BisI GCNGC 8 cut(s) 351, 621, 735, 823, 1340, 1350, 1389, 1449
BlpI GCTNAGC 2 cut(s) 1233, 1290
BlsI GCNGC 8 cut(s) 352, 622, 736, 824, 1341, 1351, 1390, 1450
Bme1390I CCNGG 2 cut(s) 491, 1069
Bme18I GGWCC 2 cut(s) 571, 1191
BmgBI CACGTC 2 cut(s) 121, 1318
BmgT120I GGNCC 4 cut(s) 4, 571, 873, 1191
BmiI GGNNCC 4 cut(s) 207, 481, 573, 1119
BmrFI CCNGG 2 cut(s) 491, 1069
BmsI GCATC 4 cut(s) 84, 141, 819, 1351
BoxI GACNNNNGTC 1 cut(s) 789
BpiI GAAGAC 6 cut(s) 345, 561, 785, 888, 900, 1275
Bpu1102I GCTNAGC 2 cut(s) 1233, 1290
Bpu14I TTCGAA 1 cut(s) 654
BpuEI CTTGAG 2 cut(s) 426, 1124
BpuMI CCSGG 1 cut(s) 1069
BsaJI CCNNGG 2 cut(s) 167, 919
BsaWI WCCGGW 1 cut(s) 1193
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 3 cut(s) 580, 744, 1418
Bse118I RCCGGY 1 cut(s) 1222
Bse1I ACTGG 6 cut(s) 361, 481, 709, 738, 804, 1121
Bse3DI GCAATG 2 cut(s) 750, 1059
BseBI CCWGG 1 cut(s) 491
BseDI CCNNGG 2 cut(s) 167, 919
BseGI GGATG 5 cut(s) 207, 268, 604, 713, 1342
BseLI CCNNNNNNNGG 3 cut(s) 580, 744, 1418
BseMI GCAATG 2 cut(s) 750, 1059
BseMII CTCAG 3 cut(s) 36, 273, 1281
BseNI ACTGG 6 cut(s) 361, 481, 709, 738, 804, 1121
BseRI GAGGAG 2 cut(s) 1344, 1391
BseXI GCAGC 7 cut(s) 337, 607, 721, 1326, 1336, 1375, 1435
BseYI CCCAGC 1 cut(s) 498
BshFI GGCC 8 cut(s) 6, 386, 402, 825, 837, 875, 1244, 1398
BshNI GGYRCC 1 cut(s) 479
BsiHKAI GWGCWC 1 cut(s) 1332
BsiSI CCGG 4 cut(s) 98, 1068, 1194, 1223
BslFI GGGAC 1 cut(s) 797
BslI CCNNNNNNNGG 3 cut(s) 580, 744, 1418
BsmAI GTCTC 3 cut(s) 40, 66, 1306
BsmFI GGGAC 1 cut(s) 797
BsmI GAATGC 1 cut(s) 407
BsnI GGCC 8 cut(s) 6, 386, 402, 825, 837, 875, 1244, 1398
Bsp119I TTCGAA 1 cut(s) 654
Bsp1286I GDGCHC 1 cut(s) 1332
Bsp143I GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
Bsp1720I GCTNAGC 2 cut(s) 1233, 1290
BspACI CCGC 3 cut(s) 332, 822, 1226
BspANI GGCC 8 cut(s) 6, 386, 402, 825, 837, 875, 1244, 1398
BspCNI CTCAG 3 cut(s) 35, 274, 1282
BspLI GGNNCC 4 cut(s) 207, 481, 573, 1119
BspMI ACCTGC 1 cut(s) 88
BspPI GGATC 2 cut(s) 382, 640
BspQI GCTCTTC 1 cut(s) 800
BspT104I TTCGAA 1 cut(s) 654
BspT107I GGYRCC 1 cut(s) 479
BsrDI GCAATG 2 cut(s) 750, 1059
BsrFI RCCGGY 1 cut(s) 1222
BsrI ACTGG 6 cut(s) 361, 481, 709, 738, 804, 1121
BssAI RCCGGY 1 cut(s) 1222
BssECI CCNNGG 2 cut(s) 167, 919
BssMI GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
BssT1I CCWWGG 2 cut(s) 167, 919
Bst2UI CCWGG 1 cut(s) 491
Bst4CI ACNGT 4 cut(s) 344, 370, 1022, 1433
Bst6I CTCTTC 1 cut(s) 800
BstAPI GCANNNNNTGC 1 cut(s) 404
BstBI TTCGAA 1 cut(s) 654
BstC8I GCNNGC 6 cut(s) 396, 400, 449, 1209, 1224, 1413
BstDEI CTNAG 5 cut(s) 22, 84, 282, 1233, 1290
BstF5I GGATG 5 cut(s) 207, 268, 604, 713, 1342
BstKTI GATC 7 cut(s) 138, 319, 377, 635, 679, 775, 1438
BstMAI GTCTC 3 cut(s) 40, 66, 1306
BstMBI GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
BstMWI GCNNNNNNNGC 3 cut(s) 404, 1336, 1358
BstNI CCWGG 1 cut(s) 491
BstNSI RCATGY 1 cut(s) 1241
BstPAI GACNNNNGTC 1 cut(s) 789
BstSCI CCNGG 2 cut(s) 489, 1067
BstV1I GCAGC 7 cut(s) 337, 607, 721, 1326, 1336, 1375, 1435
BstV2I GAAGAC 6 cut(s) 345, 561, 785, 888, 900, 1275
BstX2I RGATCY 1 cut(s) 316
BstXI CCANNNNNNTGG 2 cut(s) 394, 833
BstYI RGATCY 1 cut(s) 316
BsuI GTATCC 3 cut(s) 706, 777, 1010
BsuRI GGCC 8 cut(s) 6, 386, 402, 825, 837, 875, 1244, 1398
BtrI CACGTC 2 cut(s) 121, 1318
BtsCI GGATG 5 cut(s) 207, 268, 604, 713, 1342
BtsIMutI CAGTG 5 cut(s) 279, 474, 745, 797, 1128
BveI ACCTGC 1 cut(s) 88
Cac8I GCNNGC 6 cut(s) 396, 400, 449, 1209, 1224, 1413
Cfr10I RCCGGY 1 cut(s) 1222
Cfr13I GGNCC 4 cut(s) 4, 571, 873, 1191
CpoI CGGWCCG 1 cut(s) 1191
CseI GACGC 4 cut(s) 15, 740, 1175, 1238
Csp6I GTAC 1 cut(s) 268
CspCI CAANNNNNGTGG 2 cut(s) 102, 137
CspI CGGWCCG 1 cut(s) 1191
CviQI GTAC 1 cut(s) 268
DdeI CTNAG 5 cut(s) 22, 84, 282, 1233, 1290
DpnI GATC 7 cut(s) 137, 318, 376, 634, 678, 774, 1437
DpnII GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
DraIII CACNNNGTG 1 cut(s) 1444
EaeI YGGCCR 1 cut(s) 823
Eam1104I CTCTTC 1 cut(s) 800
EarI CTCTTC 1 cut(s) 800
EciI GGCGGA 1 cut(s) 1241
Ecl136II GAGCTC 1 cut(s) 1330
Eco130I CCWWGG 2 cut(s) 167, 919
Eco147I AGGCCT 1 cut(s) 402
Eco24I GRGCYC 1 cut(s) 1332
Eco47I GGWCC 2 cut(s) 571, 1191
Eco53kI GAGCTC 1 cut(s) 1330
Eco57I CTGAAG 3 cut(s) 272, 554, 912
EcoICRI GAGCTC 1 cut(s) 1330
EcoRI GAATTC 2 cut(s) 103, 650
EcoRII CCWGG 1 cut(s) 489
EcoT14I CCWWGG 2 cut(s) 167, 919
EcoT38I GRGCYC 1 cut(s) 1332
ErhI CCWWGG 2 cut(s) 167, 919
FaqI GGGAC 1 cut(s) 797
FbaI TGATCA 2 cut(s) 135, 1435
FblI GTMKAC 1 cut(s) 729
Fnu4HI GCNGC 8 cut(s) 351, 621, 735, 823, 1340, 1350, 1389, 1449
FokI GGATG 5 cut(s) 214, 275, 611, 720, 1329
FriOI GRGCYC 1 cut(s) 1332
Fsp4HI GCNGC 8 cut(s) 351, 621, 735, 823, 1340, 1350, 1389, 1449
FspBI CTAG 1 cut(s) 966
GluI GCNGC 8 cut(s) 351, 621, 735, 823, 1340, 1350, 1389, 1449
GsaI CCCAGC 1 cut(s) 502
HaeIII GGCC 8 cut(s) 6, 386, 402, 825, 837, 875, 1244, 1398
HapII CCGG 4 cut(s) 98, 1068, 1194, 1223
HgaI GACGC 4 cut(s) 15, 740, 1175, 1238
HincII GTYRAC 2 cut(s) 256, 730
HindII GTYRAC 2 cut(s) 256, 730
HindIII AAGCTT 1 cut(s) 221
HinfI GANTC 4 cut(s) 74, 233, 292, 852
HpaII CCGG 4 cut(s) 98, 1068, 1194, 1223
HphI GGTGA 4 cut(s) 69, 356, 814, 934
Hpy166II GTNNAC 4 cut(s) 43, 256, 304, 730
Hpy188I TCNGA 8 cut(s) 31, 71, 291, 382, 1001, 1044, 1177, 1306
Hpy188III TCNNGA 6 cut(s) 130, 412, 670, 770, 776, 1141
Hpy8I GTNNAC 4 cut(s) 43, 256, 304, 730
Hpy99I CGWCG 2 cut(s) 734, 1191
HpyAV CCTTC 4 cut(s) 430, 529, 949, 1465
HpyCH4III ACNGT 4 cut(s) 344, 370, 1022, 1433
HpyCH4IV ACGT 2 cut(s) 120, 1317
HpyF10VI GCNNNNNNNGC 3 cut(s) 404, 1336, 1358
HpyF3I CTNAG 5 cut(s) 22, 84, 282, 1233, 1290
HpySE526I ACGT 2 cut(s) 120, 1317
KroI GCCGGC 1 cut(s) 1222
KroNI GCCGGC 1 cut(s) 1224
Ksp22I TGATCA 2 cut(s) 135, 1435
Kzo9I GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
LguI GCTCTTC 1 cut(s) 800
LmnI GCTCC 4 cut(s) 205, 923, 1254, 1357
Lsp1109I GCAGC 7 cut(s) 337, 607, 721, 1326, 1336, 1375, 1435
LweI GCATC 4 cut(s) 84, 141, 819, 1351
MaeI CTAG 1 cut(s) 966
MaeII ACGT 2 cut(s) 120, 1317
MaeIII GTNAC 4 cut(s) 190, 274, 472, 1154
MalI GATC 7 cut(s) 137, 318, 376, 634, 678, 774, 1437
MboI GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
MboII GAAGA 9 cut(s) 350, 566, 668, 785, 817, 893, 895, 905, 1280
MflI RGATCY 1 cut(s) 316
MhlI GDGCHC 1 cut(s) 1332
MluCI AATT 7 cut(s) 103, 650, 720, 913, 949, 1036, 1180
MlyI GAGTC 1 cut(s) 68
MmeI TCCRAC 1 cut(s) 1178
MroNI GCCGGC 1 cut(s) 1222
MseI TTAA 2 cut(s) 1092, 1167
MslI CAYNNNNRTG 1 cut(s) 831
MspA1I CMGCKG 2 cut(s) 822, 1349
MspI CCGG 4 cut(s) 98, 1068, 1194, 1223
MspR9I CCNGG 2 cut(s) 491, 1069
Mva1269I GAATGC 1 cut(s) 407
MvaI CCWGG 1 cut(s) 491
MwoI GCNNNNNNNGC 3 cut(s) 404, 1336, 1358
NaeI GCCGGC 1 cut(s) 1224
NciI CCSGG 1 cut(s) 1069
NdeII GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
NgoMIV GCCGGC 1 cut(s) 1222
NlaIV GGNNCC 4 cut(s) 207, 481, 573, 1119
NmuCI GTSAC 2 cut(s) 190, 472
NspI RCATGY 1 cut(s) 1241
NspV TTCGAA 1 cut(s) 654
PaqCI CACCTGC 1 cut(s) 88
PceI AGGCCT 1 cut(s) 402
PciSI GCTCTTC 1 cut(s) 800
PcsI WCGNNNNNNNCGW 1 cut(s) 67
PctI GAATGC 1 cut(s) 407
PdiI GCCGGC 1 cut(s) 1224
PfeI GAWTC 3 cut(s) 233, 292, 852
PflFI GACNNNGTC 1 cut(s) 575
PkrI GCNGC 8 cut(s) 352, 622, 736, 824, 1341, 1351, 1390, 1450
PleI GAGTC 1 cut(s) 68
PpsI GAGTC 1 cut(s) 68
PshAI GACNNNNGTC 1 cut(s) 789
Psp124BI GAGCTC 1 cut(s) 1332
Psp6I CCWGG 1 cut(s) 489
PspFI CCCAGC 1 cut(s) 498
PspGI CCWGG 1 cut(s) 489
PspN4I GGNNCC 4 cut(s) 207, 481, 573, 1119
PspPI GGNCC 4 cut(s) 4, 571, 873, 1191
PsuI RGATCY 1 cut(s) 316
PsyI GACNNNGTC 1 cut(s) 575
PvuII CAGCTG 1 cut(s) 1349
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
RseI CAYNNNNRTG 1 cut(s) 831
Rsr2I CGGWCCG 1 cut(s) 1191
RsrII CGGWCCG 1 cut(s) 1191
SacI GAGCTC 1 cut(s) 1332
SalI GTCGAC 1 cut(s) 728
SapI GCTCTTC 1 cut(s) 800
SaqAI TTAA 2 cut(s) 1092, 1167
SatI GCNGC 8 cut(s) 351, 621, 735, 823, 1340, 1350, 1389, 1449
Sau3AI GATC 7 cut(s) 135, 316, 374, 632, 676, 772, 1435
Sau96I GGNCC 4 cut(s) 4, 571, 873, 1191
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 2 cut(s) 491, 1069
SduI GDGCHC 1 cut(s) 1332
SfaNI GCATC 4 cut(s) 84, 141, 819, 1351
SfuI TTCGAA 1 cut(s) 654
SinI GGWCC 2 cut(s) 571, 1191
SmiMI CAYNNNNRTG 1 cut(s) 831
SmlI CTYRAG 2 cut(s) 441, 1139
SmoI CTYRAG 2 cut(s) 441, 1139
Sse9I AATT 7 cut(s) 103, 650, 720, 913, 949, 1036, 1180
SseBI AGGCCT 1 cut(s) 402
SsiI CCGC 3 cut(s) 332, 822, 1226
SspI AATATT 1 cut(s) 986
SspMI CTAG 1 cut(s) 966
SstI GAGCTC 1 cut(s) 1332
StuI AGGCCT 1 cut(s) 402
StyD4I CCNGG 2 cut(s) 489, 1067
StyI CCWWGG 2 cut(s) 167, 919
TaaI ACNGT 4 cut(s) 344, 370, 1022, 1433
TaiI ACGT 2 cut(s) 123, 1320
TaqI TCGA 3 cut(s) 654, 729, 1332
TaqII GACCGA 1 cut(s) 1179
TasI AATT 7 cut(s) 103, 650, 720, 913, 949, 1036, 1180
TauI GCSGC 1 cut(s) 825
TfiI GAWTC 3 cut(s) 233, 292, 852
Tru1I TTAA 2 cut(s) 1092, 1167
Tru9I TTAA 2 cut(s) 1092, 1167
TscAI CASTG 5 cut(s) 286, 481, 745, 804, 1128
TseFI GTSAC 2 cut(s) 190, 472
TseI GCWGC 7 cut(s) 350, 620, 734, 1339, 1349, 1388, 1448
Tsp45I GTSAC 2 cut(s) 190, 472
TspDTI ATGAA 5 cut(s) 351, 449, 615, 713, 739
TspGWI ACGGA 2 cut(s) 779, 1241
TspRI CASTG 5 cut(s) 286, 481, 745, 804, 1128
Tth111I GACNNNGTC 1 cut(s) 575
VpaK11BI GGWCC 2 cut(s) 571, 1191
XapI RAATTY 3 cut(s) 103, 650, 1180
XceI RCATGY 1 cut(s) 1241
XmiI GTMKAC 1 cut(s) 729
XspI CTAG 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.