4Fe-4S single cluster domain of Ferredoxin I
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23240 |
| fragaria_vesca | FvH4_4g37080 |
| malus_domestica | MD13G1003800.v1.1 |
| prunus_persica | Prupe.1G348700_v2.0.a1 |
| pyrus_communis | pycom13g00320 |
| rosa_chinensis | RchiOBHm_Chr4g0446831 |
| rosa_laevigata | RLG00000005626 |
| rosa_multiflora | Rmu_co8372733.1_g000001 Rmu_sc0001753.1_g000016 Rmu_sc0001753.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00387200 |
| rosa_rugosa | Rorug04G0375000 |
| rosa_samantha | Rh4AG436500 Rh4BG445600 Rh4CG462900 Rh4DG444300 |
| rosa_wichuraiana | Rw4G037340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 156 |
| AarI | CACCTGC | 2 cut(s) | 785, 1297 |
| AbsI | CCTCGAGG | 1 cut(s) | 759 |
| Acc36I | ACCTGC | 2 cut(s) | 785, 1297 |
| AccB1I | GGYRCC | 2 cut(s) | 342, 1378 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1362, 1551 |
| AccI | GTMKAC | 1 cut(s) | 1311 |
| AciI | CCGC | 3 cut(s) | 340, 1100, 1129 |
| AclWI | GGATC | 4 cut(s) | 290, 293, 413, 644 |
| AcoI | YGGCCR | 3 cut(s) | 1148, 1408, 1542 |
| AcsI | RAATTY | 2 cut(s) | 737, 833 |
| AcvI | CACGTG | 1 cut(s) | 803 |
| AfaI | GTAC | 4 cut(s) | 479, 965, 1332, 1556 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1093, 1362, 1551 |
| AflIII | ACRYGT | 1 cut(s) | 802 |
| AgsI | TTSAA | 6 cut(s) | 123, 571, 908, 935, 984, 1063 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1307 |
| AhlI | ACTAGT | 1 cut(s) | 50 |
| AjnI | CCWGG | 3 cut(s) | 626, 849, 1520 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 660, 692 |
| AluBI | AGCT | 9 cut(s) | 93, 274, 437, 469, 533, 731, 872, 992, 1439 |
| AluI | AGCT | 9 cut(s) | 93, 274, 437, 469, 533, 731, 872, 992, 1439 |
| Alw21I | GWGCWC | 1 cut(s) | 802 |
| Alw26I | GTCTC | 3 cut(s) | 811, 890, 1422 |
| Alw44I | GTGCAC | 1 cut(s) | 798 |
| AlwI | GGATC | 4 cut(s) | 290, 293, 413, 644 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1103, 1521 |
| Ama87I | CYCGRG | 1 cut(s) | 759 |
| AoxI | GGCC | 7 cut(s) | 362, 672, 1039, 1148, 1408, 1542, 1579 |
| ApaLI | GTGCAC | 1 cut(s) | 798 |
| ApoI | RAATTY | 2 cut(s) | 737, 833 |
| AspLEI | GCGC | 3 cut(s) | 578, 587, 1134 |
| AspS9I | GGNCC | 5 cut(s) | 362, 786, 901, 1040, 1579 |
| AsuHPI | GGTGA | 2 cut(s) | 1199, 1278 |
| AvaI | CYCGRG | 1 cut(s) | 759 |
| AvaII | GGWCC | 2 cut(s) | 786, 901 |
| BaeGI | GKGCMC | 1 cut(s) | 802 |
| BalI | TGGCCA | 1 cut(s) | 1544 |
| BanI | GGYRCC | 2 cut(s) | 342, 1378 |
| BbrPI | CACGTG | 1 cut(s) | 803 |
| Bbv12I | GWGCWC | 1 cut(s) | 802 |
| BbvCI | CCTCAGC | 1 cut(s) | 988 |
| BccI | CCATC | 7 cut(s) | 271, 310, 947, 1171, 1356, 1387, 1553 |
| BceAI | ACGGC | 1 cut(s) | 1385 |
| BciT130I | CCWGG | 3 cut(s) | 628, 851, 1522 |
| BcoDI | GTCTC | 3 cut(s) | 811, 890, 1422 |
| BcuI | ACTAGT | 1 cut(s) | 50 |
| BfaI | CTAG | 4 cut(s) | 51, 162, 725, 1107 |
| BfmI | CTRYAG | 3 cut(s) | 6, 332, 1440 |
| BfuAI | ACCTGC | 2 cut(s) | 785, 1297 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 370, 680 |
| BglII | AGATCT | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 3 cut(s) | 628, 851, 1522 |
| Bme18I | GGWCC | 2 cut(s) | 786, 901 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1307 |
| BmeT110I | CYCGRG | 1 cut(s) | 759 |
| BmgT120I | GGNCC | 5 cut(s) | 362, 786, 901, 1040, 1579 |
| BmiI | GGNNCC | 5 cut(s) | 344, 787, 1340, 1371, 1380 |
| BmrFI | CCNGG | 3 cut(s) | 628, 851, 1522 |
| BmsI | GCATC | 4 cut(s) | 71, 708, 844, 1579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 988 |
| Bsa29I | ATCGAT | 1 cut(s) | 285 |
| BsaAI | YACGTR | 1 cut(s) | 803 |
| BsaBI | GATNNNNATC | 1 cut(s) | 281 |
| BsaJI | CCNNGG | 1 cut(s) | 627 |
| BsaWI | WCCGGW | 1 cut(s) | 324 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1250, 1280 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1093, 1362, 1551 |
| Bse1I | ACTGG | 3 cut(s) | 891, 962, 971 |
| Bse8I | GATNNNNATC | 1 cut(s) | 281 |
| BseBI | CCWGG | 3 cut(s) | 628, 851, 1522 |
| BseCI | ATCGAT | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 627 |
| BseGI | GGATG | 6 cut(s) | 387, 550, 859, 1031, 1052, 1078 |
| BseJI | GATNNNNATC | 1 cut(s) | 281 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1093, 1362, 1551 |
| BseMII | CTCAG | 5 cut(s) | 53, 297, 495, 513, 1002 |
| BseNI | ACTGG | 3 cut(s) | 891, 962, 971 |
| BseRI | GAGGAG | 6 cut(s) | 202, 205, 1076, 1190, 1193, 1234 |
| BseSI | GKGCMC | 1 cut(s) | 802 |
| BshFI | GGCC | 7 cut(s) | 364, 674, 1041, 1150, 1410, 1544, 1581 |
| BshNI | GGYRCC | 2 cut(s) | 342, 1378 |
| BshVI | ATCGAT | 1 cut(s) | 285 |
| BsiHKAI | GWGCWC | 1 cut(s) | 802 |
| BsiHKCI | CYCGRG | 1 cut(s) | 759 |
| BsiSI | CCGG | 2 cut(s) | 325, 1147 |
| BslFI | GGGAC | 1 cut(s) | 799 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1093, 1362, 1551 |
| BsmAI | GTCTC | 3 cut(s) | 811, 890, 1422 |
| BsmBI | CGTCTC | 2 cut(s) | 890, 1422 |
| BsmFI | GGGAC | 1 cut(s) | 799 |
| BsnI | GGCC | 7 cut(s) | 364, 674, 1041, 1150, 1410, 1544, 1581 |
| BsoBI | CYCGRG | 1 cut(s) | 759 |
| Bsp1286I | GDGCHC | 1 cut(s) | 802 |
| BspACI | CCGC | 3 cut(s) | 340, 1100, 1129 |
| BspANI | GGCC | 7 cut(s) | 364, 674, 1041, 1150, 1410, 1544, 1581 |
| BspCNI | CTCAG | 5 cut(s) | 52, 298, 494, 512, 1001 |
| BspDI | ATCGAT | 1 cut(s) | 285 |
| BspLI | GGNNCC | 5 cut(s) | 344, 787, 1340, 1371, 1380 |
| BspMAI | CTGCAG | 2 cut(s) | 10, 336 |
| BspMI | ACCTGC | 2 cut(s) | 785, 1297 |
| BspPI | GGATC | 4 cut(s) | 290, 293, 413, 644 |
| BspQI | GCTCTTC | 3 cut(s) | 414, 616, 1221 |
| BspT107I | GGYRCC | 2 cut(s) | 342, 1378 |
| BsrI | ACTGG | 3 cut(s) | 891, 962, 971 |
| BssECI | CCNNGG | 1 cut(s) | 627 |
| Bst2UI | CCWGG | 3 cut(s) | 628, 851, 1522 |
| Bst4CI | ACNGT | 7 cut(s) | 152, 924, 1187, 1419, 1451, 1517, 1570 |
| Bst6I | CTCTTC | 3 cut(s) | 414, 616, 1221 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 564, 1103 |
| BstBAI | YACGTR | 1 cut(s) | 803 |
| BstC8I | GCNNGC | 3 cut(s) | 22, 366, 453 |
| BstDEI | CTNAG | 6 cut(s) | 39, 306, 481, 499, 988, 1611 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| BstF5I | GGATG | 6 cut(s) | 387, 550, 859, 1031, 1052, 1078 |
| BstHHI | GCGC | 3 cut(s) | 578, 587, 1134 |
| BstMAI | GTCTC | 3 cut(s) | 811, 890, 1422 |
| BstNI | CCWGG | 3 cut(s) | 628, 851, 1522 |
| BstNSI | RCATGY | 1 cut(s) | 24 |
| BstSCI | CCNGG | 3 cut(s) | 626, 849, 1520 |
| BstSFI | CTRYAG | 3 cut(s) | 6, 332, 1440 |
| BstSLI | GKGCMC | 1 cut(s) | 802 |
| BstX2I | RGATCY | 1 cut(s) | 176 |
| BstYI | RGATCY | 1 cut(s) | 176 |
| Bsu15I | ATCGAT | 1 cut(s) | 285 |
| BsuRI | GGCC | 7 cut(s) | 364, 674, 1041, 1150, 1410, 1544, 1581 |
| BsuTUI | ATCGAT | 1 cut(s) | 285 |
| BtsCI | GGATG | 6 cut(s) | 387, 550, 859, 1031, 1052, 1078 |
| BtsI | GCAGTG | 1 cut(s) | 772 |
| BtsIMutI | CAGTG | 4 cut(s) | 618, 647, 772, 898 |
| BveI | ACCTGC | 2 cut(s) | 785, 1297 |
| Cac8I | GCNNGC | 3 cut(s) | 22, 366, 453 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1103, 1521 |
| CfoI | GCGC | 3 cut(s) | 578, 587, 1134 |
| Cfr13I | GGNCC | 5 cut(s) | 362, 786, 901, 1040, 1579 |
| ClaI | ATCGAT | 1 cut(s) | 285 |
| CseI | GACGC | 1 cut(s) | 337 |
| Csp6I | GTAC | 4 cut(s) | 478, 964, 1331, 1555 |
| CviAII | CATG | 6 cut(s) | 21, 169, 374, 379, 781, 1223 |
| CviQI | GTAC | 4 cut(s) | 478, 964, 1331, 1555 |
| DdeI | CTNAG | 6 cut(s) | 39, 306, 481, 499, 988, 1611 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1307 |
| EaeI | YGGCCR | 3 cut(s) | 1148, 1408, 1542 |
| Eam1104I | CTCTTC | 3 cut(s) | 414, 616, 1221 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1307 |
| EarI | CTCTTC | 3 cut(s) | 414, 616, 1221 |
| Eco32I | GATATC | 2 cut(s) | 355, 1124 |
| Eco47I | GGWCC | 2 cut(s) | 786, 901 |
| Eco72I | CACGTG | 1 cut(s) | 803 |
| Eco88I | CYCGRG | 1 cut(s) | 759 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| EcoRII | CCWGG | 3 cut(s) | 626, 849, 1520 |
| EcoRV | GATATC | 2 cut(s) | 355, 1124 |
| Esp3I | CGTCTC | 2 cut(s) | 890, 1422 |
| FaeI | CATG | 6 cut(s) | 24, 172, 377, 382, 784, 1226 |
| FaqI | GGGAC | 1 cut(s) | 799 |
| FatI | CATG | 6 cut(s) | 20, 168, 373, 378, 780, 1222 |
| FauNDI | CATATG | 1 cut(s) | 403 |
| FblI | GTMKAC | 1 cut(s) | 1311 |
| FokI | GGATG | 6 cut(s) | 374, 557, 866, 1018, 1039, 1085 |
| FspBI | CTAG | 4 cut(s) | 51, 162, 725, 1107 |
| GlaI | GCGC | 3 cut(s) | 577, 586, 1133 |
| HaeIII | GGCC | 7 cut(s) | 364, 674, 1041, 1150, 1410, 1544, 1581 |
| HapII | CCGG | 2 cut(s) | 325, 1147 |
| HgaI | GACGC | 1 cut(s) | 337 |
| HhaI | GCGC | 3 cut(s) | 578, 587, 1134 |
| Hin1II | CATG | 6 cut(s) | 24, 172, 377, 382, 784, 1226 |
| Hin6I | GCGC | 3 cut(s) | 576, 585, 1132 |
| HinP1I | GCGC | 3 cut(s) | 576, 585, 1132 |
| HincII | GTYRAC | 2 cut(s) | 1312, 1513 |
| HindII | GTYRAC | 2 cut(s) | 1312, 1513 |
| HindIII | AAGCTT | 1 cut(s) | 870 |
| HinfI | GANTC | 3 cut(s) | 608, 656, 846 |
| HpaII | CCGG | 2 cut(s) | 325, 1147 |
| HphI | GGTGA | 2 cut(s) | 1199, 1278 |
| Hpy166II | GTNNAC | 4 cut(s) | 800, 1005, 1312, 1513 |
| Hpy188I | TCNGA | 5 cut(s) | 307, 418, 517, 944, 1091 |
| Hpy188III | TCNNGA | 4 cut(s) | 653, 703, 734, 838 |
| Hpy8I | GTNNAC | 4 cut(s) | 800, 1005, 1312, 1513 |
| Hpy99I | CGWCG | 1 cut(s) | 1305 |
| HpyAV | CCTTC | 3 cut(s) | 35, 914, 1293 |
| HpyCH4III | ACNGT | 7 cut(s) | 152, 924, 1187, 1419, 1451, 1517, 1570 |
| HpyCH4IV | ACGT | 2 cut(s) | 430, 802 |
| HpyF3I | CTNAG | 6 cut(s) | 39, 306, 481, 499, 988, 1611 |
| HpySE526I | ACGT | 2 cut(s) | 430, 802 |
| Hsp92II | CATG | 6 cut(s) | 24, 172, 377, 382, 784, 1226 |
| HspAI | GCGC | 3 cut(s) | 576, 585, 1132 |
| LguI | GCTCTTC | 3 cut(s) | 414, 616, 1221 |
| LmnI | GCTCC | 6 cut(s) | 17, 98, 448, 712, 1375, 1436 |
| LweI | GCATC | 4 cut(s) | 71, 708, 844, 1579 |
| MaeI | CTAG | 4 cut(s) | 51, 162, 725, 1107 |
| MaeII | ACGT | 2 cut(s) | 430, 802 |
| MaeIII | GTNAC | 4 cut(s) | 1187, 1419, 1445, 1524 |
| MboII | GAAGA | 5 cut(s) | 210, 401, 536, 633, 1208 |
| MflI | RGATCY | 1 cut(s) | 176 |
| MhlI | GDGCHC | 1 cut(s) | 802 |
| MlsI | TGGCCA | 1 cut(s) | 1544 |
| MluCI | AATT | 6 cut(s) | 139, 424, 459, 737, 833, 930 |
| MluNI | TGGCCA | 1 cut(s) | 1544 |
| MmeI | TCCRAC | 3 cut(s) | 834, 978, 1293 |
| Mox20I | TGGCCA | 1 cut(s) | 1544 |
| MscI | TGGCCA | 1 cut(s) | 1544 |
| MseI | TTAA | 4 cut(s) | 1154, 1205, 1472, 1596 |
| MslI | CAYNNNNRTG | 3 cut(s) | 141, 1071, 1485 |
| Msp20I | TGGCCA | 1 cut(s) | 1544 |
| MspA1I | CMGCKG | 2 cut(s) | 1100, 1129 |
| MspI | CCGG | 2 cut(s) | 325, 1147 |
| MspR9I | CCNGG | 3 cut(s) | 628, 851, 1522 |
| MvaI | CCWGG | 3 cut(s) | 628, 851, 1522 |
| NdeI | CATATG | 1 cut(s) | 403 |
| NlaIII | CATG | 6 cut(s) | 24, 172, 377, 382, 784, 1226 |
| NlaIV | GGNNCC | 5 cut(s) | 344, 787, 1340, 1371, 1380 |
| NmuCI | GTSAC | 2 cut(s) | 1187, 1419 |
| NspI | RCATGY | 1 cut(s) | 24 |
| PaeI | GCATGC | 1 cut(s) | 24 |
| PaeR7I | CTCGAG | 1 cut(s) | 759 |
| PaqCI | CACCTGC | 2 cut(s) | 785, 1297 |
| PciSI | GCTCTTC | 3 cut(s) | 414, 616, 1221 |
| PfeI | GAWTC | 3 cut(s) | 608, 656, 846 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1362, 1551 |
| PfoI | TCCNGGA | 1 cut(s) | 849 |
| PmaCI | CACGTG | 1 cut(s) | 803 |
| PmlI | CACGTG | 1 cut(s) | 803 |
| Ppu21I | YACGTR | 1 cut(s) | 803 |
| PsiI | TTATAA | 1 cut(s) | 156 |
| Psp6I | CCWGG | 3 cut(s) | 626, 849, 1520 |
| PspCI | CACGTG | 1 cut(s) | 803 |
| PspGI | CCWGG | 3 cut(s) | 626, 849, 1520 |
| PspN4I | GGNNCC | 5 cut(s) | 344, 787, 1340, 1371, 1380 |
| PspPI | GGNCC | 5 cut(s) | 362, 786, 901, 1040, 1579 |
| PspXI | VCTCGAGB | 1 cut(s) | 759 |
| PstI | CTGCAG | 2 cut(s) | 10, 336 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1103, 1521 |
| PsuI | RGATCY | 1 cut(s) | 176 |
| RsaI | GTAC | 4 cut(s) | 479, 965, 1332, 1556 |
| RsaNI | GTAC | 4 cut(s) | 478, 964, 1331, 1555 |
| RseI | CAYNNNNRTG | 3 cut(s) | 141, 1071, 1485 |
| SalI | GTCGAC | 1 cut(s) | 1310 |
| SapI | GCTCTTC | 3 cut(s) | 414, 616, 1221 |
| SaqAI | TTAA | 4 cut(s) | 1154, 1205, 1472, 1596 |
| Sau96I | GGNCC | 5 cut(s) | 362, 786, 901, 1040, 1579 |
| ScrFI | CCNGG | 3 cut(s) | 628, 851, 1522 |
| SduI | GDGCHC | 1 cut(s) | 802 |
| SfaNI | GCATC | 4 cut(s) | 71, 708, 844, 1579 |
| SfcI | CTRYAG | 3 cut(s) | 6, 332, 1440 |
| Sfr274I | CTCGAG | 1 cut(s) | 759 |
| SinI | GGWCC | 2 cut(s) | 786, 901 |
| SlaI | CTCGAG | 1 cut(s) | 759 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 141, 1071, 1485 |
| SmlI | CTYRAG | 1 cut(s) | 759 |
| SmoI | CTYRAG | 1 cut(s) | 759 |
| SpeI | ACTAGT | 1 cut(s) | 50 |
| SphI | GCATGC | 1 cut(s) | 24 |
| Sse9I | AATT | 6 cut(s) | 139, 424, 459, 737, 833, 930 |
| SsiI | CCGC | 3 cut(s) | 340, 1100, 1129 |
| SspI | AATATT | 1 cut(s) | 1389 |
| SspMI | CTAG | 4 cut(s) | 51, 162, 725, 1107 |
| StyD4I | CCNGG | 3 cut(s) | 626, 849, 1520 |
| TaaI | ACNGT | 7 cut(s) | 152, 924, 1187, 1419, 1451, 1517, 1570 |
| TaiI | ACGT | 2 cut(s) | 433, 805 |
| TaqI | TCGA | 6 cut(s) | 285, 472, 606, 704, 760, 1311 |
| TasI | AATT | 6 cut(s) | 139, 424, 459, 737, 833, 930 |
| TatI | WGTACW | 2 cut(s) | 963, 1330 |
| TauI | GCSGC | 2 cut(s) | 1103, 1132 |
| TfiI | GAWTC | 3 cut(s) | 608, 656, 846 |
| Tru1I | TTAA | 4 cut(s) | 1154, 1205, 1472, 1596 |
| Tru9I | TTAA | 4 cut(s) | 1154, 1205, 1472, 1596 |
| TscAI | CASTG | 4 cut(s) | 618, 647, 772, 898 |
| TseFI | GTSAC | 2 cut(s) | 1187, 1419 |
| Tsp45I | GTSAC | 2 cut(s) | 1187, 1419 |
| TspDTI | ATGAA | 4 cut(s) | 125, 411, 561, 1041 |
| TspGWI | ACGGA | 3 cut(s) | 914, 1085, 1318 |
| TspRI | CASTG | 4 cut(s) | 618, 647, 772, 898 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1362, 1551 |
| VneI | GTGCAC | 1 cut(s) | 798 |
| VpaK11BI | GGWCC | 2 cut(s) | 786, 901 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1091 |
| XapI | RAATTY | 2 cut(s) | 737, 833 |
| XceI | RCATGY | 1 cut(s) | 24 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1034, 1363 |
| XhoI | CTCGAG | 1 cut(s) | 759 |
| XmiI | GTMKAC | 1 cut(s) | 1311 |
| XspI | CTAG | 4 cut(s) | 51, 162, 725, 1107 |