Rroxscaffold_5G00387200

4Fe-4S single cluster domain of Ferredoxin I

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014546
Physical Location & Seq
Reverse (-)
65911556 .. 65913931
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00387200.1

Sequence Viewer

Length: 1551 bp
ATGCCTCCAGCAGCAGGAATAGCATGTCTTCCTCTGTATGTTCCCTCCCCAACTTGTTCTGCTTCAATGGTCGTAACAAGAACAACTACCCCAAGAACCTCCTCCTGGGGTTGTGCTCAAAAGCCTCCTAGTAAGATCATGAAGATTACAAGATGGAGATGCAGGGCAAGAGCTTCTTCTAGCGGATCTGACATCACAGACTTTGATCTCTACGATCTTATGGGCATCGATAGCTCTTCGGATCACTCTGAAATTAGAAAAGCATATCGGACACTCCAGAAGAGGTGTCACCCGGACATCGCTGGCGCAGCAGGCCATGACATGGCCATCATTCTCAATGAAGCATATGCTCTTCTCTCTGATCCTAATCAACGCCTGGCTTATGATAAGGAGCACTCGAAAATTGCAGAGCTCCGAGGTTACTCAGGGAAGCCTCTTTACTCGTCATGGTTTGGTTCAGAAACCGAAGAACGAGCAGTTTTTGTGGATGAAGTCAAGTGTATTGGTTGCTTGAAATGTGCGTTATGTGCTGAAAAAACTTTTGCAATTGAATCCGTGTATGGAAGAGCCAGGGTTGTCGGACAGTGGGCTGACCCTGAACACAAAATACAGCAGGCTATACAGGTTTGTCCTGTTGATTGCATCTCGGTTGTGGAGAGGTCGGACCTAGCAGCTCTGGAATTTCTAATGTCGAAGCAGCCACGTGGCAATGTAAGAATAGGAATGGGGAATTCAGCTGGTATACGAGTCTCCAATATCTTTGTTGAGGTGAAAAAATTCCAGACAAGATTCCAAGATGCAAAACAGAAAGCTTCTGCACAGAGTTCTAATGAGACAGACTTACAGAGAGAAGCAAGAGTATCAGCAATTCAAGCCATCAGATCCATCTCCAACTGGTTGTATTGGACACCCTTTGCAAGTGCAGGTGAAACCAGTTCCAGAAGTACAACAAAGCCTCTCCAACATTTAAGACTACTTACCGCGCATAAAGAATCCAGCACAGAATCTGAACCAAACATTGGCAAGATCAGAGATGCAGCTGCTGCCAGGAAACAACCAAAAAGAAACAGCAACCGCCGAACCTCTGCATTGAATGGTCACACAAGTAACCAAGGTAATGATGACTATTGGACTCCATTAAGCAATGCTCTTCCAGCTGCTGCCTCAACCTCCCAAAGCAACTCCAACGTCTCGAGATCATCAGAAATTAATTCACCTGCAGCAGGTATTGGTGGCAAAAGATGGAAGCAAACAACACCTGTAGATGATAACATTCAAAGAAAGAGCAACCCAATTAGTTGGGTGGCTCCAATGGGACCAGCAATGGTTGCTTCATTTCTTATAGCTAGATTACAAGGAGATGAAGTTGCAACAGTTAACGGTAGTACTGGTACAGGTGGTGGTGGTTTGACAGAACATGTATATGGCTCTTTAGCACTGGACATAGTCAACAGCTCTTCGTTACAGATCATATTGGCGGGGATTACCTGGTATATAATTGGAACGATAATTGTAGGACTTGCAGATGCCATTCAAAGTAGGGAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ Fer4_13

Protein Analysis

516

Amino Acids

55.96

Weight (kDa)

9.08

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 69 - 129 5.6e-14 DnaJ domain
Fer4_15 PF13459 160 - 217 4.1e-06 4Fe-4S single cluster domain
Fer4_13 PF13370 162 - 217 1.9e-12 4Fe-4S single cluster domain of Ferredoxin I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014546)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23240
fragaria_vesca FvH4_4g37080
malus_domestica MD13G1003800.v1.1
prunus_persica Prupe.1G348700_v2.0.a1
pyrus_communis pycom13g00320
rosa_chinensis RchiOBHm_Chr4g0446831
rosa_laevigata RLG00000005626
rosa_multiflora Rmu_co8372733.1_g000001 Rmu_sc0001753.1_g000016 Rmu_sc0001753.1_g000019
rosa_roxburghii Rroxscaffold_5G00387200
rosa_rugosa Rorug04G0375000
rosa_samantha Rh4AG436500 Rh4BG445600 Rh4CG462900 Rh4DG444300
rosa_wichuraiana Rw4G037340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 914, 1225
Acc36I ACCTGC 3 cut(s) 914, 1214, 1225
AccB7I CCANNNNNTGG 2 cut(s) 322, 1019
AccI GTMKAC 1 cut(s) 742
AccII CGCG 1 cut(s) 983
AciI CCGC 4 cut(s) 183, 981, 1075, 1478
AclWI GGATC 4 cut(s) 193, 249, 356, 876
AcoI YGGCCR 1 cut(s) 324
AcsI RAATTY 3 cut(s) 680, 730, 776
AcvI CACGTG 1 cut(s) 704
AfaI GTAC 3 cut(s) 946, 1387, 1393
AfiI CCNNNNNNNGG 5 cut(s) 14, 105, 322, 1019, 1223
AflIII ACRYGT 1 cut(s) 1417
AgsI TTSAA 7 cut(s) 66, 514, 551, 872, 1093, 1277, 1535
AjnI CCWGG 5 cut(s) 104, 375, 569, 1046, 1487
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
Alw21I GWGCWC 3 cut(s) 118, 396, 414
Alw26I GTCTC 3 cut(s) 754, 827, 1195
AlwI GGATC 4 cut(s) 193, 249, 356, 876
AlwNI CAGNNNCTG 3 cut(s) 1007, 1043, 1160
Ama87I CYCGRG 1 cut(s) 1192
AoxI GGCC 2 cut(s) 313, 324
ApoI RAATTY 3 cut(s) 680, 730, 776
AseI ATTAAT 1 cut(s) 1209
Asp700I GAANNNNTTC 1 cut(s) 776
AspLEI GCGC 2 cut(s) 308, 985
AspS9I GGNCC 2 cut(s) 664, 1316
AsuC2I CCSGG 1 cut(s) 293
AsuHPI GGTGA 4 cut(s) 281, 781, 938, 1206
AvaI CYCGRG 1 cut(s) 1192
AvaII GGWCC 2 cut(s) 664, 1316
BalI TGGCCA 1 cut(s) 326
BanII GRGCYC 1 cut(s) 414
BarI GAAGNNNNNNTAC 2 cut(s) 422, 454
BbrPI CACGTG 1 cut(s) 704
BbsI GAAGAC 1 cut(s) 20
Bbv12I GWGCWC 3 cut(s) 118, 396, 414
BccI CCATC 5 cut(s) 147, 335, 884, 893, 1236
BciT130I CCWGG 5 cut(s) 106, 377, 571, 1048, 1489
BcnI CCSGG 1 cut(s) 293
BcoDI GTCTC 3 cut(s) 754, 827, 1195
BfaI CTAG 4 cut(s) 129, 180, 668, 1347
BfmI CTRYAG 2 cut(s) 1218, 1260
BfuAI ACCTGC 3 cut(s) 914, 1214, 1225
BmcAI AGTACT 1 cut(s) 1387
Bme1390I CCNGG 6 cut(s) 106, 293, 377, 571, 1048, 1489
Bme18I GGWCC 2 cut(s) 664, 1316
BmeT110I CYCGRG 1 cut(s) 1192
BmgT120I GGNCC 2 cut(s) 664, 1316
BmiI GGNNCC 2 cut(s) 1308, 1317
BmrFI CCNGG 6 cut(s) 106, 293, 377, 571, 1048, 1489
BmsI GCATC 6 cut(s) 149, 234, 651, 787, 1024, 1516
BpiI GAAGAC 1 cut(s) 20
BpmI CTGGAG 1 cut(s) 260
BpuMI CCSGG 1 cut(s) 293
Bsa29I ATCGAT 1 cut(s) 228
BsaAI YACGTR 1 cut(s) 704
BsaBI GATNNNNATC 1 cut(s) 366
BsaJI CCNNGG 4 cut(s) 105, 415, 570, 1111
BsaXI ACNNNNNCTCC 2 cut(s) 1350, 1380
Bsc4I CCNNNNNNNGG 5 cut(s) 14, 105, 322, 1019, 1223
Bse1I ACTGG 4 cut(s) 899, 933, 1393, 1443
Bse3DI GCAATG 3 cut(s) 715, 1150, 1329
Bse8I GATNNNNATC 1 cut(s) 366
BseBI CCWGG 5 cut(s) 106, 377, 571, 1048, 1489
BseCI ATCGAT 1 cut(s) 228
BseDI CCNNGG 4 cut(s) 105, 415, 570, 1111
BseGI GGATG 1 cut(s) 493
BseJI GATNNNNATC 1 cut(s) 366
BseLI CCNNNNNNNGG 5 cut(s) 14, 105, 322, 1019, 1223
BseMI GCAATG 3 cut(s) 715, 1150, 1329
BseMII CTCAG 1 cut(s) 438
BseNI ACTGG 4 cut(s) 899, 933, 1393, 1443
BseRI GAGGAG 1 cut(s) 91
BsgI GTGCAG 2 cut(s) 801, 942
Bsh1236I CGCG 1 cut(s) 983
BshFI GGCC 2 cut(s) 315, 326
BshVI ATCGAT 1 cut(s) 228
BsiHKAI GWGCWC 3 cut(s) 118, 396, 414
BsiHKCI CYCGRG 1 cut(s) 1192
BsiSI CCGG 1 cut(s) 293
BslFI GGGAC 1 cut(s) 1329
BslI CCNNNNNNNGG 5 cut(s) 14, 105, 322, 1019, 1223
BsmAI GTCTC 3 cut(s) 754, 827, 1195
BsmBI CGTCTC 1 cut(s) 1195
BsmFI GGGAC 1 cut(s) 1329
BsnI GGCC 2 cut(s) 315, 326
BsoBI CYCGRG 1 cut(s) 1192
Bsp1286I GDGCHC 3 cut(s) 118, 396, 414
BspACI CCGC 4 cut(s) 183, 981, 1075, 1478
BspANI GGCC 2 cut(s) 315, 326
BspCNI CTCAG 1 cut(s) 437
BspDI ATCGAT 1 cut(s) 228
BspFNI CGCG 1 cut(s) 983
BspHI TCATGA 1 cut(s) 138
BspLI GGNNCC 2 cut(s) 1308, 1317
BspMAI CTGCAG 1 cut(s) 1222
BspMI ACCTGC 3 cut(s) 914, 1214, 1225
BspPI GGATC 4 cut(s) 193, 249, 356, 876
BspQI GCTCTTC 5 cut(s) 241, 357, 559, 1155, 1462
BsrDI GCAATG 3 cut(s) 715, 1150, 1329
BsrI ACTGG 4 cut(s) 899, 933, 1393, 1443
BssECI CCNNGG 4 cut(s) 105, 415, 570, 1111
BssNAI GTATAC 1 cut(s) 743
BssT1I CCWWGG 1 cut(s) 1111
Bst1107I GTATAC 1 cut(s) 743
Bst2UI CCWGG 5 cut(s) 106, 377, 571, 1048, 1489
Bst4CI ACNGT 3 cut(s) 585, 1375, 1382
Bst6I CTCTTC 6 cut(s) 241, 275, 357, 559, 1155, 1462
BstAPI GCANNNNNTGC 2 cut(s) 1043, 1328
BstBAI YACGTR 1 cut(s) 704
BstC8I GCNNGC 3 cut(s) 304, 313, 615
BstDEI CTNAG 1 cut(s) 424
BstENI CCTNNNNNAGG 1 cut(s) 1221
BstF5I GGATG 1 cut(s) 493
BstFNI CGCG 1 cut(s) 983
BstHHI GCGC 2 cut(s) 308, 985
BstMAI GTCTC 3 cut(s) 754, 827, 1195
BstMWI GCNNNNNNNGC 9 cut(s) 20, 231, 308, 312, 527, 872, 1043, 1154, 1328
BstNI CCWGG 5 cut(s) 106, 377, 571, 1048, 1489
BstNSI RCATGY 2 cut(s) 27, 1421
BstSCI CCNGG 6 cut(s) 104, 291, 375, 569, 1046, 1487
BstSFI CTRYAG 2 cut(s) 1218, 1260
BstUI CGCG 1 cut(s) 983
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 2 cut(s) 185, 881
BstXI CCANNNNNNTGG 1 cut(s) 1299
BstYI RGATCY 2 cut(s) 185, 881
BstZ17I GTATAC 1 cut(s) 743
Bsu15I ATCGAT 1 cut(s) 228
BsuRI GGCC 2 cut(s) 315, 326
BsuTUI ATCGAT 1 cut(s) 228
BtgZI GCGATG 1 cut(s) 283
BtsCI GGATG 1 cut(s) 493
BtsIMutI CAGTG 2 cut(s) 590, 1436
BveI ACCTGC 3 cut(s) 914, 1214, 1225
Cac8I GCNNGC 3 cut(s) 304, 313, 615
CaiI CAGNNNCTG 3 cut(s) 1007, 1043, 1160
CciI TCATGA 1 cut(s) 138
CfoI GCGC 2 cut(s) 308, 985
Cfr13I GGNCC 2 cut(s) 664, 1316
ClaI ATCGAT 1 cut(s) 228
CsiI ACCWGGT 1 cut(s) 1487
Csp6I GTAC 3 cut(s) 945, 1386, 1392
CviAII CATG 6 cut(s) 24, 139, 317, 322, 447, 1418
CviQI GTAC 3 cut(s) 945, 1386, 1392
DdeI CTNAG 1 cut(s) 424
EaeI YGGCCR 1 cut(s) 324
Eam1104I CTCTTC 6 cut(s) 241, 275, 357, 559, 1155, 1462
EarI CTCTTC 6 cut(s) 241, 275, 357, 559, 1155, 1462
Ecl136II GAGCTC 1 cut(s) 412
Eco130I CCWWGG 1 cut(s) 1111
Eco24I GRGCYC 1 cut(s) 414
Eco47I GGWCC 2 cut(s) 664, 1316
Eco53kI GAGCTC 1 cut(s) 412
Eco72I CACGTG 1 cut(s) 704
Eco88I CYCGRG 1 cut(s) 1192
EcoICRI GAGCTC 1 cut(s) 412
EcoNI CCTNNNNNAGG 1 cut(s) 1221
EcoRI GAATTC 1 cut(s) 730
EcoRII CCWGG 5 cut(s) 104, 375, 569, 1046, 1487
EcoT14I CCWWGG 1 cut(s) 1111
EcoT38I GRGCYC 1 cut(s) 414
ErhI CCWWGG 1 cut(s) 1111
Esp3I CGTCTC 1 cut(s) 1195
FaeI CATG 6 cut(s) 27, 142, 320, 325, 450, 1421
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FaqI GGGAC 1 cut(s) 1329
FatI CATG 6 cut(s) 23, 138, 316, 321, 446, 1417
FauI CCCGC 1 cut(s) 1471
FauNDI CATATG 1 cut(s) 346
FblI GTMKAC 1 cut(s) 742
FokI GGATG 1 cut(s) 500
FriOI GRGCYC 1 cut(s) 414
FspBI CTAG 4 cut(s) 129, 180, 668, 1347
GlaI GCGC 2 cut(s) 307, 984
GsuI CTGGAG 1 cut(s) 260
HaeIII GGCC 2 cut(s) 315, 326
HapII CCGG 1 cut(s) 293
HhaI GCGC 2 cut(s) 308, 985
Hin1II CATG 6 cut(s) 27, 142, 320, 325, 450, 1421
Hin6I GCGC 2 cut(s) 306, 983
HinP1I GCGC 2 cut(s) 306, 983
HincII GTYRAC 2 cut(s) 1378, 1450
HindII GTYRAC 2 cut(s) 1378, 1450
HindIII AAGCTT 1 cut(s) 810
HinfI GANTC 6 cut(s) 551, 747, 789, 992, 1004, 1132
HpaI GTTAAC 1 cut(s) 1378
HpaII CCGG 1 cut(s) 293
HphI GGTGA 4 cut(s) 281, 781, 938, 1206
Hpy166II GTNNAC 3 cut(s) 743, 1378, 1450
Hpy188III TCNNGA 7 cut(s) 139, 277, 677, 781, 939, 1192, 1194
Hpy8I GTNNAC 3 cut(s) 743, 1378, 1450
HpyCH4III ACNGT 3 cut(s) 585, 1375, 1382
HpyCH4IV ACGT 2 cut(s) 703, 1188
HpyF10VI GCNNNNNNNGC 9 cut(s) 20, 231, 308, 312, 527, 872, 1043, 1154, 1328
HpyF3I CTNAG 1 cut(s) 424
HpySE526I ACGT 2 cut(s) 703, 1188
Hsp92II CATG 6 cut(s) 27, 142, 320, 325, 450, 1421
HspAI GCGC 2 cut(s) 306, 983
KspAI GTTAAC 1 cut(s) 1378
LguI GCTCTTC 5 cut(s) 241, 357, 559, 1155, 1462
LmnI GCTCC 3 cut(s) 391, 417, 1312
LweI GCATC 6 cut(s) 149, 234, 651, 787, 1024, 1516
MabI ACCWGGT 1 cut(s) 1487
MaeI CTAG 4 cut(s) 129, 180, 668, 1347
MaeII ACGT 2 cut(s) 703, 1188
MaeIII GTNAC 6 cut(s) 73, 287, 419, 1097, 1106, 1461
MfeI CAATTG 1 cut(s) 546
MflI RGATCY 2 cut(s) 185, 881
MhlI GDGCHC 3 cut(s) 118, 396, 414
MlsI TGGCCA 1 cut(s) 326
MluNI TGGCCA 1 cut(s) 326
MlyI GAGTC 2 cut(s) 756, 1126
MmeI TCCRAC 5 cut(s) 559, 642, 915, 985, 1209
Mox20I TGGCCA 1 cut(s) 326
MroXI GAANNNNTTC 1 cut(s) 776
MscI TGGCCA 1 cut(s) 326
MseI TTAA 4 cut(s) 968, 1139, 1209, 1377
MslI CAYNNNNRTG 1 cut(s) 1422
Msp20I TGGCCA 1 cut(s) 326
MspA1I CMGCKG 3 cut(s) 737, 1040, 1157
MspI CCGG 1 cut(s) 293
MspR9I CCNGG 6 cut(s) 106, 293, 377, 571, 1048, 1489
MunI CAATTG 1 cut(s) 546
MvaI CCWGG 5 cut(s) 106, 377, 571, 1048, 1489
MvnI CGCG 1 cut(s) 983
MwoI GCNNNNNNNGC 9 cut(s) 20, 231, 308, 312, 527, 872, 1043, 1154, 1328
NciI CCSGG 1 cut(s) 293
NdeI CATATG 1 cut(s) 346
NlaIII CATG 6 cut(s) 27, 142, 320, 325, 450, 1421
NlaIV GGNNCC 2 cut(s) 1308, 1317
NmuCI GTSAC 2 cut(s) 287, 1097
NspI RCATGY 2 cut(s) 27, 1421
PaeR7I CTCGAG 1 cut(s) 1192
PagI TCATGA 1 cut(s) 138
PaqCI CACCTGC 2 cut(s) 914, 1225
PciI ACATGT 1 cut(s) 1417
PciSI GCTCTTC 5 cut(s) 241, 357, 559, 1155, 1462
PdmI GAANNNNTTC 1 cut(s) 776
PfeI GAWTC 4 cut(s) 551, 789, 992, 1004
PflFI GACNNNGTC 1 cut(s) 1445
PflMI CCANNNNNTGG 2 cut(s) 322, 1019
PleI GAGTC 2 cut(s) 755, 1126
PmaCI CACGTG 1 cut(s) 704
PmlI CACGTG 1 cut(s) 704
PpsI GAGTC 2 cut(s) 755, 1126
Ppu21I YACGTR 1 cut(s) 704
PscI ACATGT 1 cut(s) 1417
PshBI ATTAAT 1 cut(s) 1209
Psp124BI GAGCTC 1 cut(s) 414
Psp6I CCWGG 5 cut(s) 104, 375, 569, 1046, 1487
PspCI CACGTG 1 cut(s) 704
PspGI CCWGG 5 cut(s) 104, 375, 569, 1046, 1487
PspN4I GGNNCC 2 cut(s) 1308, 1317
PspPI GGNCC 2 cut(s) 664, 1316
PsrI GAACNNNNNNTAC 2 cut(s) 591, 623
PstI CTGCAG 1 cut(s) 1222
PstNI CAGNNNCTG 3 cut(s) 1007, 1043, 1160
PsuI RGATCY 2 cut(s) 185, 881
PsyI GACNNNGTC 1 cut(s) 1445
PvuII CAGCTG 3 cut(s) 737, 1040, 1157
RsaI GTAC 3 cut(s) 946, 1387, 1393
RsaNI GTAC 3 cut(s) 945, 1386, 1392
RseI CAYNNNNRTG 1 cut(s) 1422
SacI GAGCTC 1 cut(s) 414
SapI GCTCTTC 5 cut(s) 241, 357, 559, 1155, 1462
SaqAI TTAA 4 cut(s) 968, 1139, 1209, 1377
Sau96I GGNCC 2 cut(s) 664, 1316
ScaI AGTACT 1 cut(s) 1387
SchI GAGTC 2 cut(s) 756, 1126
ScrFI CCNGG 6 cut(s) 106, 293, 377, 571, 1048, 1489
SduI GDGCHC 3 cut(s) 118, 396, 414
SexAI ACCWGGT 1 cut(s) 1487
SfaNI GCATC 6 cut(s) 149, 234, 651, 787, 1024, 1516
SfcI CTRYAG 2 cut(s) 1218, 1260
Sfr274I CTCGAG 1 cut(s) 1192
SinI GGWCC 2 cut(s) 664, 1316
SlaI CTCGAG 1 cut(s) 1192
SmiMI CAYNNNNRTG 1 cut(s) 1422
SmlI CTYRAG 1 cut(s) 1192
SmoI CTYRAG 1 cut(s) 1192
SsiI CCGC 4 cut(s) 183, 981, 1075, 1478
SspMI CTAG 4 cut(s) 129, 180, 668, 1347
SstI GAGCTC 1 cut(s) 414
StyD4I CCNGG 6 cut(s) 104, 291, 375, 569, 1046, 1487
StyI CCWWGG 1 cut(s) 1111
TaaI ACNGT 3 cut(s) 585, 1375, 1382
TaiI ACGT 2 cut(s) 706, 1191
TaqI TCGA 4 cut(s) 228, 398, 692, 1193
TatI WGTACW 2 cut(s) 944, 1385
TfiI GAWTC 4 cut(s) 551, 789, 992, 1004
Tru1I TTAA 4 cut(s) 968, 1139, 1209, 1377
Tru9I TTAA 4 cut(s) 968, 1139, 1209, 1377
TscAI CASTG 2 cut(s) 590, 1443
TseFI GTSAC 2 cut(s) 287, 1097
Tsp45I GTSAC 2 cut(s) 287, 1097
TspDTI ATGAA 5 cut(s) 155, 354, 504, 1323, 1377
TspGWI ACGGA 1 cut(s) 544
TspRI CASTG 2 cut(s) 590, 1443
Tth111I GACNNNGTC 1 cut(s) 1445
Van91I CCANNNNNTGG 2 cut(s) 322, 1019
VpaK11BI GGWCC 2 cut(s) 664, 1316
VspI ATTAAT 1 cut(s) 1209
XagI CCTNNNNNAGG 1 cut(s) 1221
XapI RAATTY 3 cut(s) 680, 730, 776
XceI RCATGY 2 cut(s) 27, 1421
XhoI CTCGAG 1 cut(s) 1192
XmiI GTMKAC 1 cut(s) 742
XmnI GAANNNNTTC 1 cut(s) 776
XspI CTAG 4 cut(s) 129, 180, 668, 1347
ZrmI AGTACT 1 cut(s) 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.