Rw4G037340

4Fe-4S single cluster domain of Ferredoxin I

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0014546
Physical Location & Seq
Reverse (-)
63998011 .. 64000056
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G037340.1

Sequence Viewer

Length: 1491 bp
ATGCCTCCAGCAGCAGGAATAGCATGTCTTCCTCTCTATGTTCCCTCCCCAACTTGTTCTGCTTCAATGGTCGTAACAAGAACATCTACCCCAAGAACCTCCTCCTCCTGGGGTTGTGCTCGAAAGCCTCCTAGTAAGATCATGAAGATTACAAGATGGAGATGCAGGGCAAGAGCTTCTTCTAGCGGATATGACATCACAGACTTTGATCTCTACGACCTTATGGGCATCGATAGCTCTTCGGATCACTCTGAAATAAGAAAAGCATATCGGACACTCCAGAAGAGGTGTCACCCGGACATCGCTGGCGCAGCAGGCCATGACATGGCATCATTCTCAATGAAGCATATGCTCTTCTCTCTGATCCTAATCAACGCCTGGCTTATGATAAGTTTATTGATGCAGGAGCACTCGAAAAATGCAGAGCTCCGAGGTTACGCAGGGAAGCCTCTTTACTCGTCATGGTTTGGTTCAGAAACCGAAGAACGAGCAGTTTTCGTGGATGAAGTCAAGTGTATTGGTTGCTTGAAATGTGCGTTATCCAGGGTTGTCGGACAGTGGGCTGACCCTGAACACAAAATACAGCAGGCTATACAGGCTTGTCCTGTTGATTGCATCTCGGTTGTGGAGAGGTCGGACCTGGCAGCTCTGGAATTTCTAATGTCGAAGCAGCCACGTGGCAATGTAAGAATAGGAATGGGGAATTCAGCCGGTATACGAGTCTCCAACATCTTTGTTGAGGTGAAAAAATTCAAGACAAGATTCCAAGATGCAAAACAGAAAGCTTCTGCACACAGTTCTAATGAGACAGACTTACAAAGAGAAGCAAGAGTATCAGCAATTCAAGCCATCAGATCCATCTCCAACTGGTTGTATTGGACACCCTTTGCAAGTGCAGGTGAAACCAGTTCCAGAAGTACAACAAAGCCTCTCCAACATTTAAGACTACTTACCGCGCATAAAGAATCCAGCACAGAATCTGAACCAAACATTGGCAAGATCAGAGATGCACAACCGCCGAACCTCTGCATTGAATGGTCACACAGTAACCCAGGTGATGATGACTATTGGACTCCATTGAGCAATGCTCTTCCAGCTGCTGCCTCAATCTCCCAAAGCAACTCCAACGTCTCGAGATCATCAGAACCTAATTCACCTGCAGCAGGTATTGGTGGCAAAAGATGGAAGCAAACAACACCTGTAGGTGATAACATTCGAAGAAAGAGCAACCCAATTAGATGGGTGGCTCCAATGGGACCAGCAATGGTTGCTTCATTTCTTATAGCTAGATTACAAGGAGATGAAGTTGCAACAGTTAACGGTAGTACTAGTACAGGCGGTGGTGGTTTGACAGAACATGTATATGGCTCTTTAGCACTGGACATAGTCAACAGCTCTTGGTTACAGATCATATTGGCAGGGATTACCTGGTATATAATTGGAACAATAATTGTAGGACTTGCAGATGCCATTCAAAGTAGGGAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ Fer4_13

Protein Analysis

496

Amino Acids

54.13

Weight (kDa)

9.04

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 70 - 102 8.6e-08 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014546)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23240
fragaria_vesca FvH4_4g37080
malus_domestica MD13G1003800.v1.1
prunus_persica Prupe.1G348700_v2.0.a1
pyrus_communis pycom13g00320
rosa_chinensis RchiOBHm_Chr4g0446831
rosa_laevigata RLG00000005626
rosa_multiflora Rmu_co8372733.1_g000001 Rmu_sc0001753.1_g000016 Rmu_sc0001753.1_g000019
rosa_roxburghii Rroxscaffold_5G00387200
rosa_rugosa Rorug04G0375000
rosa_samantha Rh4AG436500 Rh4BG445600 Rh4CG462900 Rh4DG444300
rosa_wichuraiana Rw4G037340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 887, 1165
Acc36I ACCTGC 3 cut(s) 887, 1154, 1165
AccB7I CCANNNNNTGG 2 cut(s) 325, 992
AccI GTMKAC 1 cut(s) 715
AccII CGCG 1 cut(s) 956
AciI CCGC 4 cut(s) 186, 954, 1016, 1338
AclWI GGATC 3 cut(s) 252, 358, 849
AcsI RAATTY 3 cut(s) 653, 703, 749
AcvI CACGTG 1 cut(s) 677
AfaI GTAC 3 cut(s) 919, 1327, 1333
AfiI CCNNNNNNNGG 5 cut(s) 14, 108, 325, 992, 1163
AflIII ACRYGT 1 cut(s) 1357
AgsI TTSAA 6 cut(s) 66, 529, 754, 845, 1034, 1475
AhlI ACTAGT 1 cut(s) 1328
AjnI CCWGG 6 cut(s) 107, 377, 542, 639, 1051, 1427
AjuI GAANNNNNNNTTGG 2 cut(s) 975, 1007
AluBI AGCT 8 cut(s) 176, 237, 427, 647, 785, 1097, 1286, 1395
AluI AGCT 8 cut(s) 176, 237, 427, 647, 785, 1097, 1286, 1395
Alw21I GWGCWC 3 cut(s) 121, 411, 429
Alw26I GTCTC 3 cut(s) 727, 800, 1135
AlwI GGATC 3 cut(s) 252, 358, 849
AlwNI CAGNNNCTG 2 cut(s) 980, 1100
Ama87I CYCGRG 1 cut(s) 1132
AoxI GGCC 1 cut(s) 316
ApeKI GCWGC 7 cut(s) 11, 311, 644, 670, 1097, 1100, 1160
ApoI RAATTY 3 cut(s) 653, 703, 749
Asp700I GAANNNNTTC 1 cut(s) 749
AspLEI GCGC 2 cut(s) 311, 958
AspS9I GGNCC 2 cut(s) 637, 1256
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 6 cut(s) 284, 754, 911, 1067, 1146, 1217
AsuII TTCGAA 1 cut(s) 1216
AvaI CYCGRG 1 cut(s) 1132
AvaII GGWCC 2 cut(s) 637, 1256
BanII GRGCYC 1 cut(s) 429
BarI GAAGNNNNNNTAC 2 cut(s) 437, 469
BbrPI CACGTG 1 cut(s) 677
BbsI GAAGAC 1 cut(s) 20
Bbv12I GWGCWC 3 cut(s) 121, 411, 429
BbvI GCAGC 7 cut(s) 23, 323, 656, 682, 1084, 1087, 1172
BccI CCATC 5 cut(s) 150, 857, 866, 1176, 1233
BciT130I CCWGG 6 cut(s) 109, 379, 544, 641, 1053, 1429
BcnI CCSGG 1 cut(s) 296
BcoDI GTCTC 3 cut(s) 727, 800, 1135
BcuI ACTAGT 1 cut(s) 1328
BfaI CTAG 4 cut(s) 132, 183, 1287, 1329
BfmI CTRYAG 2 cut(s) 1158, 1200
BfuAI ACCTGC 3 cut(s) 887, 1154, 1165
BisI GCNGC 7 cut(s) 12, 312, 645, 671, 1098, 1101, 1161
BlsI GCNGC 7 cut(s) 13, 313, 646, 672, 1099, 1102, 1162
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 7 cut(s) 109, 296, 379, 544, 641, 1053, 1429
Bme18I GGWCC 2 cut(s) 637, 1256
BmeT110I CYCGRG 1 cut(s) 1132
BmgT120I GGNCC 2 cut(s) 637, 1256
BmiI GGNNCC 2 cut(s) 1248, 1257
BmrFI CCNGG 7 cut(s) 109, 296, 379, 544, 641, 1053, 1429
BmsI GCATC 8 cut(s) 152, 237, 338, 390, 624, 760, 997, 1456
BpiI GAAGAC 1 cut(s) 20
BplI GAGNNNNNCTC 2 cut(s) 1072, 1104
BpmI CTGGAG 1 cut(s) 263
Bpu14I TTCGAA 1 cut(s) 1216
BpuMI CCSGG 1 cut(s) 296
Bsa29I ATCGAT 1 cut(s) 231
BsaAI YACGTR 1 cut(s) 677
BsaBI GATNNNNATC 1 cut(s) 368
BsaJI CCNNGG 4 cut(s) 108, 430, 543, 1051
BsaXI ACNNNNNCTCC 2 cut(s) 1290, 1320
Bsc4I CCNNNNNNNGG 5 cut(s) 14, 108, 325, 992, 1163
Bse118I RCCGGY 1 cut(s) 710
Bse1I ACTGG 3 cut(s) 872, 906, 1383
Bse3DI GCAATG 3 cut(s) 688, 1090, 1269
Bse8I GATNNNNATC 1 cut(s) 368
BseBI CCWGG 6 cut(s) 109, 379, 544, 641, 1053, 1429
BseCI ATCGAT 1 cut(s) 231
BseDI CCNNGG 4 cut(s) 108, 430, 543, 1051
BseGI GGATG 1 cut(s) 508
BseJI GATNNNNATC 1 cut(s) 368
BseLI CCNNNNNNNGG 5 cut(s) 14, 108, 325, 992, 1163
BseMI GCAATG 3 cut(s) 688, 1090, 1269
BseNI ACTGG 3 cut(s) 872, 906, 1383
BseRI GAGGAG 2 cut(s) 91, 94
BseXI GCAGC 7 cut(s) 23, 323, 656, 682, 1084, 1087, 1172
BsgI GTGCAG 2 cut(s) 774, 915
Bsh1236I CGCG 1 cut(s) 956
BshFI GGCC 1 cut(s) 318
BshVI ATCGAT 1 cut(s) 231
BsiHKAI GWGCWC 3 cut(s) 121, 411, 429
BsiHKCI CYCGRG 1 cut(s) 1132
BsiSI CCGG 2 cut(s) 296, 711
BslFI GGGAC 1 cut(s) 1269
BslI CCNNNNNNNGG 5 cut(s) 14, 108, 325, 992, 1163
BsmAI GTCTC 3 cut(s) 727, 800, 1135
BsmBI CGTCTC 1 cut(s) 1135
BsmFI GGGAC 1 cut(s) 1269
BsnI GGCC 1 cut(s) 318
BsoBI CYCGRG 1 cut(s) 1132
Bsp119I TTCGAA 1 cut(s) 1216
Bsp1286I GDGCHC 3 cut(s) 121, 411, 429
Bsp143I GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
BspACI CCGC 4 cut(s) 186, 954, 1016, 1338
BspANI GGCC 1 cut(s) 318
BspDI ATCGAT 1 cut(s) 231
BspFNI CGCG 1 cut(s) 956
BspHI TCATGA 1 cut(s) 141
BspLI GGNNCC 2 cut(s) 1248, 1257
BspMAI CTGCAG 1 cut(s) 1162
BspMI ACCTGC 3 cut(s) 887, 1154, 1165
BspPI GGATC 3 cut(s) 252, 358, 849
BspQI GCTCTTC 3 cut(s) 244, 359, 1095
BspT104I TTCGAA 1 cut(s) 1216
BsrDI GCAATG 3 cut(s) 688, 1090, 1269
BsrFI RCCGGY 1 cut(s) 710
BsrI ACTGG 3 cut(s) 872, 906, 1383
BssAI RCCGGY 1 cut(s) 710
BssECI CCNNGG 4 cut(s) 108, 430, 543, 1051
BssMI GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
BssNAI GTATAC 1 cut(s) 716
Bst1107I GTATAC 1 cut(s) 716
Bst2UI CCWGG 6 cut(s) 109, 379, 544, 641, 1053, 1429
Bst4CI ACNGT 5 cut(s) 558, 797, 1046, 1315, 1322
Bst6I CTCTTC 4 cut(s) 244, 278, 359, 1095
BstAPI GCANNNNNTGC 1 cut(s) 1268
BstBAI YACGTR 1 cut(s) 677
BstBI TTCGAA 1 cut(s) 1216
BstC8I GCNNGC 3 cut(s) 307, 316, 588
BstENI CCTNNNNNAGG 1 cut(s) 1161
BstF5I GGATG 1 cut(s) 508
BstFNI CGCG 1 cut(s) 956
BstHHI GCGC 2 cut(s) 311, 958
BstKTI GATC 8 cut(s) 141, 211, 247, 366, 857, 1002, 1139, 1410
BstMAI GTCTC 3 cut(s) 727, 800, 1135
BstMBI GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
BstMWI GCNNNNNNNGC 8 cut(s) 20, 234, 311, 315, 596, 845, 1094, 1268
BstNI CCWGG 6 cut(s) 109, 379, 544, 641, 1053, 1429
BstNSI RCATGY 2 cut(s) 27, 1361
BstSCI CCNGG 7 cut(s) 107, 294, 377, 542, 639, 1051, 1427
BstSFI CTRYAG 2 cut(s) 1158, 1200
BstUI CGCG 1 cut(s) 956
BstV1I GCAGC 7 cut(s) 23, 323, 656, 682, 1084, 1087, 1172
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 1 cut(s) 854
BstXI CCANNNNNNTGG 1 cut(s) 1239
BstYI RGATCY 1 cut(s) 854
BstZ17I GTATAC 1 cut(s) 716
Bsu15I ATCGAT 1 cut(s) 231
BsuRI GGCC 1 cut(s) 318
BsuTUI ATCGAT 1 cut(s) 231
BtgZI GCGATG 1 cut(s) 286
BtsCI GGATG 1 cut(s) 508
BtsIMutI CAGTG 2 cut(s) 563, 1376
BveI ACCTGC 3 cut(s) 887, 1154, 1165
Cac8I GCNNGC 3 cut(s) 307, 316, 588
CaiI CAGNNNCTG 2 cut(s) 980, 1100
CciI TCATGA 1 cut(s) 141
CfoI GCGC 2 cut(s) 311, 958
Cfr10I RCCGGY 1 cut(s) 710
Cfr13I GGNCC 2 cut(s) 637, 1256
ClaI ATCGAT 1 cut(s) 231
CsiI ACCWGGT 1 cut(s) 1427
Csp6I GTAC 3 cut(s) 918, 1326, 1332
CviAII CATG 6 cut(s) 24, 142, 320, 325, 462, 1358
CviQI GTAC 3 cut(s) 918, 1326, 1332
DpnI GATC 8 cut(s) 140, 210, 246, 365, 856, 1001, 1138, 1409
DpnII GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
Eam1104I CTCTTC 4 cut(s) 244, 278, 359, 1095
EarI CTCTTC 4 cut(s) 244, 278, 359, 1095
Ecl136II GAGCTC 1 cut(s) 427
Eco24I GRGCYC 1 cut(s) 429
Eco47I GGWCC 2 cut(s) 637, 1256
Eco53kI GAGCTC 1 cut(s) 427
Eco72I CACGTG 1 cut(s) 677
Eco88I CYCGRG 1 cut(s) 1132
EcoICRI GAGCTC 1 cut(s) 427
EcoNI CCTNNNNNAGG 1 cut(s) 1161
EcoRI GAATTC 1 cut(s) 703
EcoRII CCWGG 6 cut(s) 107, 377, 542, 639, 1051, 1427
EcoT38I GRGCYC 1 cut(s) 429
Esp3I CGTCTC 1 cut(s) 1135
FaeI CATG 6 cut(s) 27, 145, 323, 328, 465, 1361
FalI AAGNNNNNCTT 2 cut(s) 163, 195
FaqI GGGAC 1 cut(s) 1269
FatI CATG 6 cut(s) 23, 141, 319, 324, 461, 1357
FauNDI CATATG 1 cut(s) 348
FblI GTMKAC 1 cut(s) 715
Fnu4HI GCNGC 7 cut(s) 12, 312, 645, 671, 1098, 1101, 1161
FokI GGATG 1 cut(s) 515
FriOI GRGCYC 1 cut(s) 429
Fsp4HI GCNGC 7 cut(s) 12, 312, 645, 671, 1098, 1101, 1161
FspBI CTAG 4 cut(s) 132, 183, 1287, 1329
GlaI GCGC 2 cut(s) 310, 957
GluI GCNGC 7 cut(s) 12, 312, 645, 671, 1098, 1101, 1161
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 1 cut(s) 318
HapII CCGG 2 cut(s) 296, 711
HhaI GCGC 2 cut(s) 311, 958
Hin1II CATG 6 cut(s) 27, 145, 323, 328, 465, 1361
Hin6I GCGC 2 cut(s) 309, 956
HinP1I GCGC 2 cut(s) 309, 956
HincII GTYRAC 2 cut(s) 1318, 1390
HindII GTYRAC 2 cut(s) 1318, 1390
HindIII AAGCTT 1 cut(s) 783
HinfI GANTC 5 cut(s) 720, 762, 965, 977, 1072
HpaI GTTAAC 1 cut(s) 1318
HpaII CCGG 2 cut(s) 296, 711
HphI GGTGA 6 cut(s) 284, 754, 911, 1067, 1146, 1217
Hpy166II GTNNAC 3 cut(s) 716, 1318, 1390
Hpy188III TCNNGA 7 cut(s) 142, 280, 650, 754, 912, 1132, 1134
Hpy8I GTNNAC 3 cut(s) 716, 1318, 1390
HpyCH4III ACNGT 5 cut(s) 558, 797, 1046, 1315, 1322
HpyCH4IV ACGT 2 cut(s) 676, 1128
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 234, 311, 315, 596, 845, 1094, 1268
HpySE526I ACGT 2 cut(s) 676, 1128
Hsp92II CATG 6 cut(s) 27, 145, 323, 328, 465, 1361
HspAI GCGC 2 cut(s) 309, 956
KspAI GTTAAC 1 cut(s) 1318
Kzo9I GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
LguI GCTCTTC 3 cut(s) 244, 359, 1095
LmnI GCTCC 3 cut(s) 406, 432, 1252
Lsp1109I GCAGC 7 cut(s) 23, 323, 656, 682, 1084, 1087, 1172
LweI GCATC 8 cut(s) 152, 237, 338, 390, 624, 760, 997, 1456
MabI ACCWGGT 1 cut(s) 1427
MaeI CTAG 4 cut(s) 132, 183, 1287, 1329
MaeII ACGT 2 cut(s) 676, 1128
MaeIII GTNAC 6 cut(s) 73, 290, 434, 1038, 1046, 1401
MalI GATC 8 cut(s) 140, 210, 246, 365, 856, 1001, 1138, 1409
MboI GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
MboII GAAGA 9 cut(s) 20, 157, 171, 231, 295, 346, 494, 1082, 1230
MflI RGATCY 1 cut(s) 854
MhlI GDGCHC 3 cut(s) 121, 411, 429
MluCI AATT 8 cut(s) 653, 703, 749, 840, 1150, 1233, 1437, 1449
MlyI GAGTC 2 cut(s) 729, 1066
MmeI TCCRAC 6 cut(s) 532, 615, 750, 888, 958, 1149
MroXI GAANNNNTTC 1 cut(s) 749
MseI TTAA 2 cut(s) 941, 1317
MslI CAYNNNNRTG 1 cut(s) 1362
MspA1I CMGCKG 1 cut(s) 1097
MspI CCGG 2 cut(s) 296, 711
MspR9I CCNGG 7 cut(s) 109, 296, 379, 544, 641, 1053, 1429
MvaI CCWGG 6 cut(s) 109, 379, 544, 641, 1053, 1429
MvnI CGCG 1 cut(s) 956
MwoI GCNNNNNNNGC 8 cut(s) 20, 234, 311, 315, 596, 845, 1094, 1268
NciI CCSGG 1 cut(s) 296
NdeI CATATG 1 cut(s) 348
NdeII GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
NlaIII CATG 6 cut(s) 27, 145, 323, 328, 465, 1361
NlaIV GGNNCC 2 cut(s) 1248, 1257
NmuCI GTSAC 2 cut(s) 290, 1038
NspI RCATGY 2 cut(s) 27, 1361
NspV TTCGAA 1 cut(s) 1216
PaeR7I CTCGAG 1 cut(s) 1132
PagI TCATGA 1 cut(s) 141
PaqCI CACCTGC 2 cut(s) 887, 1165
PciI ACATGT 1 cut(s) 1357
PciSI GCTCTTC 3 cut(s) 244, 359, 1095
PdmI GAANNNNTTC 1 cut(s) 749
PfeI GAWTC 3 cut(s) 762, 965, 977
PflFI GACNNNGTC 1 cut(s) 1385
PflMI CCANNNNNTGG 2 cut(s) 325, 992
PkrI GCNGC 7 cut(s) 13, 313, 646, 672, 1099, 1102, 1162
PleI GAGTC 2 cut(s) 728, 1066
PmaCI CACGTG 1 cut(s) 677
PmlI CACGTG 1 cut(s) 677
PpsI GAGTC 2 cut(s) 728, 1066
Ppu21I YACGTR 1 cut(s) 677
PscI ACATGT 1 cut(s) 1357
Psp124BI GAGCTC 1 cut(s) 429
Psp6I CCWGG 6 cut(s) 107, 377, 542, 639, 1051, 1427
PspCI CACGTG 1 cut(s) 677
PspGI CCWGG 6 cut(s) 107, 377, 542, 639, 1051, 1427
PspN4I GGNNCC 2 cut(s) 1248, 1257
PspPI GGNCC 2 cut(s) 637, 1256
PsrI GAACNNNNNNTAC 2 cut(s) 564, 596
PstI CTGCAG 1 cut(s) 1162
PstNI CAGNNNCTG 2 cut(s) 980, 1100
PsuI RGATCY 1 cut(s) 854
PsyI GACNNNGTC 1 cut(s) 1385
PvuII CAGCTG 1 cut(s) 1097
RsaI GTAC 3 cut(s) 919, 1327, 1333
RsaNI GTAC 3 cut(s) 918, 1326, 1332
RseI CAYNNNNRTG 1 cut(s) 1362
SacI GAGCTC 1 cut(s) 429
SapI GCTCTTC 3 cut(s) 244, 359, 1095
SaqAI TTAA 2 cut(s) 941, 1317
SatI GCNGC 7 cut(s) 12, 312, 645, 671, 1098, 1101, 1161
Sau3AI GATC 8 cut(s) 138, 208, 244, 363, 854, 999, 1136, 1407
Sau96I GGNCC 2 cut(s) 637, 1256
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 2 cut(s) 729, 1066
ScrFI CCNGG 7 cut(s) 109, 296, 379, 544, 641, 1053, 1429
SduI GDGCHC 3 cut(s) 121, 411, 429
SexAI ACCWGGT 1 cut(s) 1427
SfaNI GCATC 8 cut(s) 152, 237, 338, 390, 624, 760, 997, 1456
SfcI CTRYAG 2 cut(s) 1158, 1200
Sfr274I CTCGAG 1 cut(s) 1132
SfuI TTCGAA 1 cut(s) 1216
SinI GGWCC 2 cut(s) 637, 1256
SlaI CTCGAG 1 cut(s) 1132
SmiMI CAYNNNNRTG 1 cut(s) 1362
SmlI CTYRAG 1 cut(s) 1132
SmoI CTYRAG 1 cut(s) 1132
SpeI ACTAGT 1 cut(s) 1328
Sse9I AATT 8 cut(s) 653, 703, 749, 840, 1150, 1233, 1437, 1449
SsiI CCGC 4 cut(s) 186, 954, 1016, 1338
SspMI CTAG 4 cut(s) 132, 183, 1287, 1329
SstI GAGCTC 1 cut(s) 429
StyD4I CCNGG 7 cut(s) 107, 294, 377, 542, 639, 1051, 1427
TaaI ACNGT 5 cut(s) 558, 797, 1046, 1315, 1322
TaiI ACGT 2 cut(s) 679, 1131
TaqI TCGA 6 cut(s) 121, 231, 413, 665, 1133, 1216
TasI AATT 8 cut(s) 653, 703, 749, 840, 1150, 1233, 1437, 1449
TatI WGTACW 3 cut(s) 917, 1325, 1331
TfiI GAWTC 3 cut(s) 762, 965, 977
Tru1I TTAA 2 cut(s) 941, 1317
Tru9I TTAA 2 cut(s) 941, 1317
TscAI CASTG 2 cut(s) 563, 1383
TseFI GTSAC 2 cut(s) 290, 1038
TseI GCWGC 7 cut(s) 11, 311, 644, 670, 1097, 1100, 1160
Tsp45I GTSAC 2 cut(s) 290, 1038
TspDTI ATGAA 5 cut(s) 158, 356, 519, 1263, 1317
TspRI CASTG 2 cut(s) 563, 1383
Tth111I GACNNNGTC 1 cut(s) 1385
Van91I CCANNNNNTGG 2 cut(s) 325, 992
VpaK11BI GGWCC 2 cut(s) 637, 1256
XagI CCTNNNNNAGG 1 cut(s) 1161
XapI RAATTY 3 cut(s) 653, 703, 749
XceI RCATGY 2 cut(s) 27, 1361
XhoI CTCGAG 1 cut(s) 1132
XmiI GTMKAC 1 cut(s) 715
XmnI GAANNNNTTC 1 cut(s) 749
XspI CTAG 4 cut(s) 132, 183, 1287, 1329
ZrmI AGTACT 1 cut(s) 1327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.