4Fe-4S single cluster domain of Ferredoxin I
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23240 |
| fragaria_vesca | FvH4_4g37080 |
| malus_domestica | MD13G1003800.v1.1 |
| prunus_persica | Prupe.1G348700_v2.0.a1 |
| pyrus_communis | pycom13g00320 |
| rosa_chinensis | RchiOBHm_Chr4g0446831 |
| rosa_laevigata | RLG00000005626 |
| rosa_multiflora | Rmu_co8372733.1_g000001 Rmu_sc0001753.1_g000016 Rmu_sc0001753.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00387200 |
| rosa_rugosa | Rorug04G0375000 |
| rosa_samantha | Rh4AG436500 Rh4BG445600 Rh4CG462900 Rh4DG444300 |
| rosa_wichuraiana | Rw4G037340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 914, 1225 |
| AatII | GACGTC | 1 cut(s) | 300 |
| Acc36I | ACCTGC | 3 cut(s) | 914, 1214, 1225 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 322, 1019 |
| AccI | GTMKAC | 1 cut(s) | 742 |
| AciI | CCGC | 2 cut(s) | 183, 1075 |
| AclWI | GGATC | 4 cut(s) | 193, 249, 356, 876 |
| AcoI | YGGCCR | 1 cut(s) | 324 |
| AcsI | RAATTY | 3 cut(s) | 680, 730, 776 |
| AcvI | CACGTG | 1 cut(s) | 704 |
| AcyI | GRCGYC | 1 cut(s) | 297 |
| AfaI | GTAC | 3 cut(s) | 946, 1387, 1393 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 14, 105, 322, 1019, 1223 |
| AflII | CTTAAG | 1 cut(s) | 91 |
| AflIII | ACRYGT | 1 cut(s) | 1417 |
| AgsI | TTSAA | 6 cut(s) | 66, 514, 551, 872, 1093, 1535 |
| AjnI | CCWGG | 6 cut(s) | 104, 375, 569, 1046, 1111, 1487 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1002, 1034 |
| Alw21I | GWGCWC | 2 cut(s) | 396, 414 |
| Alw26I | GTCTC | 3 cut(s) | 754, 827, 1195 |
| AlwI | GGATC | 4 cut(s) | 193, 249, 356, 876 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1007, 1043, 1160 |
| Ama87I | CYCGRG | 1 cut(s) | 1192 |
| AoxI | GGCC | 2 cut(s) | 313, 324 |
| ApoI | RAATTY | 3 cut(s) | 680, 730, 776 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 776 |
| AspLEI | GCGC | 1 cut(s) | 308 |
| AspS9I | GGNCC | 2 cut(s) | 664, 1316 |
| AsuC2I | CCSGG | 1 cut(s) | 293 |
| AsuHPI | GGTGA | 6 cut(s) | 281, 781, 938, 1127, 1206, 1277 |
| AsuII | TTCGAA | 1 cut(s) | 1276 |
| AvaI | CYCGRG | 1 cut(s) | 1192 |
| AvaII | GGWCC | 2 cut(s) | 664, 1316 |
| BalI | TGGCCA | 1 cut(s) | 326 |
| BanII | GRGCYC | 1 cut(s) | 414 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 422, 454 |
| BbrPI | CACGTG | 1 cut(s) | 704 |
| BbsI | GAAGAC | 1 cut(s) | 20 |
| Bbv12I | GWGCWC | 2 cut(s) | 396, 414 |
| BccI | CCATC | 6 cut(s) | 147, 335, 884, 893, 1236, 1293 |
| BciT130I | CCWGG | 6 cut(s) | 106, 377, 571, 1048, 1113, 1489 |
| BcnI | CCSGG | 1 cut(s) | 293 |
| BcoDI | GTCTC | 3 cut(s) | 754, 827, 1195 |
| BfaI | CTAG | 3 cut(s) | 180, 668, 1347 |
| BfmI | CTRYAG | 3 cut(s) | 1218, 1260, 1512 |
| BfrI | CTTAAG | 1 cut(s) | 91 |
| BfuAI | ACCTGC | 3 cut(s) | 914, 1214, 1225 |
| BmcAI | AGTACT | 1 cut(s) | 1387 |
| Bme1390I | CCNGG | 7 cut(s) | 106, 293, 377, 571, 1048, 1113, 1489 |
| Bme18I | GGWCC | 2 cut(s) | 664, 1316 |
| BmeT110I | CYCGRG | 1 cut(s) | 1192 |
| BmgT120I | GGNCC | 2 cut(s) | 664, 1316 |
| BmiI | GGNNCC | 2 cut(s) | 1308, 1317 |
| BmrFI | CCNGG | 7 cut(s) | 106, 293, 377, 571, 1048, 1113, 1489 |
| BmsI | GCATC | 6 cut(s) | 149, 234, 651, 787, 1024, 1516 |
| BpiI | GAAGAC | 1 cut(s) | 20 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1132, 1164 |
| BpmI | CTGGAG | 1 cut(s) | 260 |
| Bpu14I | TTCGAA | 1 cut(s) | 1276 |
| BpuMI | CCSGG | 1 cut(s) | 293 |
| Bsa29I | ATCGAT | 1 cut(s) | 228 |
| BsaAI | YACGTR | 1 cut(s) | 704 |
| BsaBI | GATNNNNATC | 1 cut(s) | 366 |
| BsaHI | GRCGYC | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 4 cut(s) | 105, 415, 570, 1111 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1350, 1380 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 14, 105, 322, 1019, 1223 |
| Bse118I | RCCGGY | 1 cut(s) | 737 |
| Bse1I | ACTGG | 4 cut(s) | 899, 933, 1393, 1443 |
| Bse3DI | GCAATG | 2 cut(s) | 715, 1150 |
| Bse8I | GATNNNNATC | 1 cut(s) | 366 |
| BseBI | CCWGG | 6 cut(s) | 106, 377, 571, 1048, 1113, 1489 |
| BseCI | ATCGAT | 1 cut(s) | 228 |
| BseDI | CCNNGG | 4 cut(s) | 105, 415, 570, 1111 |
| BseGI | GGATG | 1 cut(s) | 493 |
| BseJI | GATNNNNATC | 1 cut(s) | 366 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 14, 105, 322, 1019, 1223 |
| BseMI | GCAATG | 2 cut(s) | 715, 1150 |
| BseMII | CTCAG | 1 cut(s) | 438 |
| BseNI | ACTGG | 4 cut(s) | 899, 933, 1393, 1443 |
| BseRI | GAGGAG | 1 cut(s) | 91 |
| BseYI | CCCAGC | 1 cut(s) | 1478 |
| BsgI | GTGCAG | 3 cut(s) | 801, 942, 966 |
| BshFI | GGCC | 2 cut(s) | 315, 326 |
| BshVI | ATCGAT | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 2 cut(s) | 396, 414 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1192 |
| BsiSI | CCGG | 2 cut(s) | 293, 738 |
| BslFI | GGGAC | 1 cut(s) | 1329 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 14, 105, 322, 1019, 1223 |
| BsmAI | GTCTC | 3 cut(s) | 754, 827, 1195 |
| BsmBI | CGTCTC | 1 cut(s) | 1195 |
| BsmFI | GGGAC | 1 cut(s) | 1329 |
| BsnI | GGCC | 2 cut(s) | 315, 326 |
| BsoBI | CYCGRG | 1 cut(s) | 1192 |
| Bsp119I | TTCGAA | 1 cut(s) | 1276 |
| Bsp1286I | GDGCHC | 2 cut(s) | 396, 414 |
| Bsp143I | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| BspACI | CCGC | 2 cut(s) | 183, 1075 |
| BspANI | GGCC | 2 cut(s) | 315, 326 |
| BspCNI | CTCAG | 1 cut(s) | 437 |
| BspDI | ATCGAT | 1 cut(s) | 228 |
| BspHI | TCATGA | 1 cut(s) | 138 |
| BspLI | GGNNCC | 2 cut(s) | 1308, 1317 |
| BspMAI | CTGCAG | 1 cut(s) | 1222 |
| BspMI | ACCTGC | 3 cut(s) | 914, 1214, 1225 |
| BspPI | GGATC | 4 cut(s) | 193, 249, 356, 876 |
| BspQI | GCTCTTC | 4 cut(s) | 241, 357, 559, 1155 |
| BspT104I | TTCGAA | 1 cut(s) | 1276 |
| BspTI | CTTAAG | 1 cut(s) | 91 |
| BsrDI | GCAATG | 2 cut(s) | 715, 1150 |
| BsrFI | RCCGGY | 1 cut(s) | 737 |
| BsrI | ACTGG | 4 cut(s) | 899, 933, 1393, 1443 |
| BssAI | RCCGGY | 1 cut(s) | 737 |
| BssECI | CCNNGG | 4 cut(s) | 105, 415, 570, 1111 |
| BssMI | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| BssNAI | GTATAC | 1 cut(s) | 743 |
| BssNI | GRCGYC | 1 cut(s) | 297 |
| Bst1107I | GTATAC | 1 cut(s) | 743 |
| Bst2UI | CCWGG | 6 cut(s) | 106, 377, 571, 1048, 1113, 1489 |
| Bst4CI | ACNGT | 5 cut(s) | 585, 824, 1375, 1382, 1513 |
| Bst6I | CTCTTC | 5 cut(s) | 241, 275, 357, 559, 1155 |
| BstACI | GRCGYC | 1 cut(s) | 297 |
| BstAFI | CTTAAG | 1 cut(s) | 91 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1043 |
| BstBAI | YACGTR | 1 cut(s) | 704 |
| BstBI | TTCGAA | 1 cut(s) | 1276 |
| BstC8I | GCNNGC | 3 cut(s) | 304, 313, 615 |
| BstDEI | CTNAG | 1 cut(s) | 424 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| BstF5I | GGATG | 1 cut(s) | 493 |
| BstHHI | GCGC | 1 cut(s) | 308 |
| BstKTI | GATC | 9 cut(s) | 138, 188, 208, 217, 244, 364, 884, 1029, 1199 |
| BstMAI | GTCTC | 3 cut(s) | 754, 827, 1195 |
| BstMBI | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| BstNI | CCWGG | 6 cut(s) | 106, 377, 571, 1048, 1113, 1489 |
| BstNSI | RCATGY | 2 cut(s) | 27, 1421 |
| BstSCI | CCNGG | 7 cut(s) | 104, 291, 375, 569, 1046, 1111, 1487 |
| BstSFI | CTRYAG | 3 cut(s) | 1218, 1260, 1512 |
| BstV2I | GAAGAC | 1 cut(s) | 20 |
| BstX2I | RGATCY | 2 cut(s) | 185, 881 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1299 |
| BstYI | RGATCY | 2 cut(s) | 185, 881 |
| BstZ17I | GTATAC | 1 cut(s) | 743 |
| Bsu15I | ATCGAT | 1 cut(s) | 228 |
| BsuRI | GGCC | 2 cut(s) | 315, 326 |
| BsuTUI | ATCGAT | 1 cut(s) | 228 |
| BtsCI | GGATG | 1 cut(s) | 493 |
| BtsIMutI | CAGTG | 2 cut(s) | 590, 1436 |
| BveI | ACCTGC | 3 cut(s) | 914, 1214, 1225 |
| Cac8I | GCNNGC | 3 cut(s) | 304, 313, 615 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1007, 1043, 1160 |
| CciI | TCATGA | 1 cut(s) | 138 |
| CfoI | GCGC | 1 cut(s) | 308 |
| Cfr10I | RCCGGY | 1 cut(s) | 737 |
| Cfr13I | GGNCC | 2 cut(s) | 664, 1316 |
| ClaI | ATCGAT | 1 cut(s) | 228 |
| CsiI | ACCWGGT | 1 cut(s) | 1487 |
| Csp6I | GTAC | 3 cut(s) | 945, 1386, 1392 |
| CviAII | CATG | 5 cut(s) | 24, 139, 317, 447, 1418 |
| CviQI | GTAC | 3 cut(s) | 945, 1386, 1392 |
| DdeI | CTNAG | 1 cut(s) | 424 |
| DpnI | GATC | 9 cut(s) | 137, 187, 207, 216, 243, 363, 883, 1028, 1198 |
| DpnII | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| EaeI | YGGCCR | 1 cut(s) | 324 |
| Eam1104I | CTCTTC | 5 cut(s) | 241, 275, 357, 559, 1155 |
| EarI | CTCTTC | 5 cut(s) | 241, 275, 357, 559, 1155 |
| Ecl136II | GAGCTC | 1 cut(s) | 412 |
| Eco24I | GRGCYC | 1 cut(s) | 414 |
| Eco47I | GGWCC | 2 cut(s) | 664, 1316 |
| Eco53kI | GAGCTC | 1 cut(s) | 412 |
| Eco72I | CACGTG | 1 cut(s) | 704 |
| Eco88I | CYCGRG | 1 cut(s) | 1192 |
| EcoICRI | GAGCTC | 1 cut(s) | 412 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| EcoRI | GAATTC | 1 cut(s) | 730 |
| EcoRII | CCWGG | 6 cut(s) | 104, 375, 569, 1046, 1111, 1487 |
| EcoT38I | GRGCYC | 1 cut(s) | 414 |
| Esp3I | CGTCTC | 1 cut(s) | 1195 |
| FaeI | CATG | 5 cut(s) | 27, 142, 320, 450, 1421 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 160, 192 |
| FaqI | GGGAC | 1 cut(s) | 1329 |
| FatI | CATG | 5 cut(s) | 23, 138, 316, 446, 1417 |
| FauNDI | CATATG | 1 cut(s) | 346 |
| FblI | GTMKAC | 1 cut(s) | 742 |
| FokI | GGATG | 1 cut(s) | 500 |
| FriOI | GRGCYC | 1 cut(s) | 414 |
| FspBI | CTAG | 3 cut(s) | 180, 668, 1347 |
| GlaI | GCGC | 1 cut(s) | 307 |
| GsaI | CCCAGC | 1 cut(s) | 1482 |
| GsuI | CTGGAG | 1 cut(s) | 260 |
| HaeIII | GGCC | 2 cut(s) | 315, 326 |
| HapII | CCGG | 2 cut(s) | 293, 738 |
| HhaI | GCGC | 1 cut(s) | 308 |
| Hin1I | GRCGYC | 1 cut(s) | 297 |
| Hin1II | CATG | 5 cut(s) | 27, 142, 320, 450, 1421 |
| Hin6I | GCGC | 1 cut(s) | 306 |
| HinP1I | GCGC | 1 cut(s) | 306 |
| HincII | GTYRAC | 2 cut(s) | 1378, 1450 |
| HindII | GTYRAC | 2 cut(s) | 1378, 1450 |
| HindIII | AAGCTT | 1 cut(s) | 810 |
| HinfI | GANTC | 7 cut(s) | 271, 551, 747, 789, 992, 1004, 1132 |
| HpaI | GTTAAC | 1 cut(s) | 1378 |
| HpaII | CCGG | 2 cut(s) | 293, 738 |
| HphI | GGTGA | 6 cut(s) | 281, 781, 938, 1127, 1206, 1277 |
| Hpy166II | GTNNAC | 3 cut(s) | 743, 1378, 1450 |
| Hpy188III | TCNNGA | 7 cut(s) | 139, 277, 677, 781, 939, 1192, 1194 |
| Hpy8I | GTNNAC | 3 cut(s) | 743, 1378, 1450 |
| Hpy99I | CGWCG | 1 cut(s) | 302 |
| HpyCH4III | ACNGT | 5 cut(s) | 585, 824, 1375, 1382, 1513 |
| HpyCH4IV | ACGT | 3 cut(s) | 297, 703, 1188 |
| HpyF3I | CTNAG | 1 cut(s) | 424 |
| HpySE526I | ACGT | 3 cut(s) | 297, 703, 1188 |
| Hsp92I | GRCGYC | 1 cut(s) | 297 |
| Hsp92II | CATG | 5 cut(s) | 27, 142, 320, 450, 1421 |
| HspAI | GCGC | 1 cut(s) | 306 |
| KspAI | GTTAAC | 1 cut(s) | 1378 |
| Kzo9I | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| LguI | GCTCTTC | 4 cut(s) | 241, 357, 559, 1155 |
| LmnI | GCTCC | 3 cut(s) | 391, 417, 1312 |
| LweI | GCATC | 6 cut(s) | 149, 234, 651, 787, 1024, 1516 |
| MabI | ACCWGGT | 1 cut(s) | 1487 |
| MaeI | CTAG | 3 cut(s) | 180, 668, 1347 |
| MaeII | ACGT | 3 cut(s) | 297, 703, 1188 |
| MaeIII | GTNAC | 5 cut(s) | 287, 419, 1097, 1106, 1461 |
| MalI | GATC | 9 cut(s) | 137, 187, 207, 216, 243, 363, 883, 1028, 1198 |
| MboI | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| MfeI | CAATTG | 1 cut(s) | 546 |
| MflI | RGATCY | 2 cut(s) | 185, 881 |
| MhlI | GDGCHC | 2 cut(s) | 396, 414 |
| MlsI | TGGCCA | 1 cut(s) | 326 |
| MluCI | AATT | 8 cut(s) | 546, 680, 730, 776, 867, 1210, 1293, 1497 |
| MluNI | TGGCCA | 1 cut(s) | 326 |
| MlyI | GAGTC | 4 cut(s) | 265, 756, 1001, 1126 |
| MmeI | TCCRAC | 7 cut(s) | 52, 559, 642, 777, 915, 985, 1209 |
| Mox20I | TGGCCA | 1 cut(s) | 326 |
| MroXI | GAANNNNTTC | 1 cut(s) | 776 |
| MscI | TGGCCA | 1 cut(s) | 326 |
| MseI | TTAA | 3 cut(s) | 92, 968, 1377 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1422 |
| Msp20I | TGGCCA | 1 cut(s) | 326 |
| MspA1I | CMGCKG | 2 cut(s) | 1043, 1157 |
| MspCI | CTTAAG | 1 cut(s) | 91 |
| MspI | CCGG | 2 cut(s) | 293, 738 |
| MspR9I | CCNGG | 7 cut(s) | 106, 293, 377, 571, 1048, 1113, 1489 |
| MunI | CAATTG | 1 cut(s) | 546 |
| MvaI | CCWGG | 6 cut(s) | 106, 377, 571, 1048, 1113, 1489 |
| NciI | CCSGG | 1 cut(s) | 293 |
| NdeI | CATATG | 1 cut(s) | 346 |
| NdeII | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| NlaIII | CATG | 5 cut(s) | 27, 142, 320, 450, 1421 |
| NlaIV | GGNNCC | 2 cut(s) | 1308, 1317 |
| NmuCI | GTSAC | 2 cut(s) | 287, 1097 |
| NspI | RCATGY | 2 cut(s) | 27, 1421 |
| NspV | TTCGAA | 1 cut(s) | 1276 |
| PaeR7I | CTCGAG | 1 cut(s) | 1192 |
| PagI | TCATGA | 1 cut(s) | 138 |
| PaqCI | CACCTGC | 2 cut(s) | 914, 1225 |
| PciI | ACATGT | 1 cut(s) | 1417 |
| PciSI | GCTCTTC | 4 cut(s) | 241, 357, 559, 1155 |
| PdmI | GAANNNNTTC | 1 cut(s) | 776 |
| PfeI | GAWTC | 3 cut(s) | 551, 789, 1004 |
| PflFI | GACNNNGTC | 1 cut(s) | 1445 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 322, 1019 |
| PleI | GAGTC | 4 cut(s) | 265, 755, 1000, 1126 |
| PmaCI | CACGTG | 1 cut(s) | 704 |
| PmlI | CACGTG | 1 cut(s) | 704 |
| PpsI | GAGTC | 4 cut(s) | 265, 755, 1000, 1126 |
| Ppu21I | YACGTR | 1 cut(s) | 704 |
| PscI | ACATGT | 1 cut(s) | 1417 |
| Psp124BI | GAGCTC | 1 cut(s) | 414 |
| Psp6I | CCWGG | 6 cut(s) | 104, 375, 569, 1046, 1111, 1487 |
| PspCI | CACGTG | 1 cut(s) | 704 |
| PspFI | CCCAGC | 1 cut(s) | 1478 |
| PspGI | CCWGG | 6 cut(s) | 104, 375, 569, 1046, 1111, 1487 |
| PspN4I | GGNNCC | 2 cut(s) | 1308, 1317 |
| PspPI | GGNCC | 2 cut(s) | 664, 1316 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 591, 623 |
| PstI | CTGCAG | 1 cut(s) | 1222 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1007, 1043, 1160 |
| PsuI | RGATCY | 2 cut(s) | 185, 881 |
| PsyI | GACNNNGTC | 1 cut(s) | 1445 |
| PvuII | CAGCTG | 2 cut(s) | 1043, 1157 |
| RsaI | GTAC | 3 cut(s) | 946, 1387, 1393 |
| RsaNI | GTAC | 3 cut(s) | 945, 1386, 1392 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1422 |
| SacI | GAGCTC | 1 cut(s) | 414 |
| SapI | GCTCTTC | 4 cut(s) | 241, 357, 559, 1155 |
| SaqAI | TTAA | 3 cut(s) | 92, 968, 1377 |
| Sau3AI | GATC | 9 cut(s) | 135, 185, 205, 214, 241, 361, 881, 1026, 1196 |
| Sau96I | GGNCC | 2 cut(s) | 664, 1316 |
| ScaI | AGTACT | 1 cut(s) | 1387 |
| SchI | GAGTC | 4 cut(s) | 265, 756, 1001, 1126 |
| ScrFI | CCNGG | 7 cut(s) | 106, 293, 377, 571, 1048, 1113, 1489 |
| SduI | GDGCHC | 2 cut(s) | 396, 414 |
| SexAI | ACCWGGT | 1 cut(s) | 1487 |
| SfaNI | GCATC | 6 cut(s) | 149, 234, 651, 787, 1024, 1516 |
| SfcI | CTRYAG | 3 cut(s) | 1218, 1260, 1512 |
| Sfr274I | CTCGAG | 1 cut(s) | 1192 |
| SfuI | TTCGAA | 1 cut(s) | 1276 |
| SinI | GGWCC | 2 cut(s) | 664, 1316 |
| SlaI | CTCGAG | 1 cut(s) | 1192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1422 |
| SmlI | CTYRAG | 2 cut(s) | 91, 1192 |
| SmoI | CTYRAG | 2 cut(s) | 91, 1192 |
| Sse9I | AATT | 8 cut(s) | 546, 680, 730, 776, 867, 1210, 1293, 1497 |
| SsiI | CCGC | 2 cut(s) | 183, 1075 |
| SspMI | CTAG | 3 cut(s) | 180, 668, 1347 |
| SstI | GAGCTC | 1 cut(s) | 414 |
| StyD4I | CCNGG | 7 cut(s) | 104, 291, 375, 569, 1046, 1111, 1487 |
| TaaI | ACNGT | 5 cut(s) | 585, 824, 1375, 1382, 1513 |
| TaiI | ACGT | 3 cut(s) | 300, 706, 1191 |
| TaqI | TCGA | 5 cut(s) | 228, 398, 692, 1193, 1276 |
| TasI | AATT | 8 cut(s) | 546, 680, 730, 776, 867, 1210, 1293, 1497 |
| TatI | WGTACW | 2 cut(s) | 944, 1385 |
| TfiI | GAWTC | 3 cut(s) | 551, 789, 1004 |
| Tru1I | TTAA | 3 cut(s) | 92, 968, 1377 |
| Tru9I | TTAA | 3 cut(s) | 92, 968, 1377 |
| TscAI | CASTG | 2 cut(s) | 590, 1443 |
| TseFI | GTSAC | 2 cut(s) | 287, 1097 |
| Tsp45I | GTSAC | 2 cut(s) | 287, 1097 |
| TspDTI | ATGAA | 5 cut(s) | 155, 354, 504, 1323, 1377 |
| TspGWI | ACGGA | 1 cut(s) | 544 |
| TspRI | CASTG | 2 cut(s) | 590, 1443 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1445 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 322, 1019 |
| Vha464I | CTTAAG | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 2 cut(s) | 664, 1316 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| XapI | RAATTY | 3 cut(s) | 680, 730, 776 |
| XceI | RCATGY | 2 cut(s) | 27, 1421 |
| XhoI | CTCGAG | 1 cut(s) | 1192 |
| XmiI | GTMKAC | 1 cut(s) | 742 |
| XmnI | GAANNNNTTC | 1 cut(s) | 776 |
| XspI | CTAG | 3 cut(s) | 180, 668, 1347 |
| ZraI | GACGTC | 1 cut(s) | 298 |
| ZrmI | AGTACT | 1 cut(s) | 1387 |