Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015274

Physical Location & Seq

Genomic Coordinates Forward (+)

33196546 .. 33198102

Gene Structure 1557 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G359300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 903 bp

ATGGCGACACTCCCAAGTTTCTTAGCCAAACCCCCTTCATCTCTATCTTCAATCCAAAAAACCAGTGGTCTGTACCGGCACTGTTCCTTTTTAAGCTTGGTCAACCAACAAAAACCTCTGTCGACAAACCTAGAAGCCAACCAAAGCCACTTCAATAGCTTTATTACCAAGGCTACAGCCGCCCCTGGCACTAAGAAAGTGGAAAGCGATGAAAGAGTGCAGCGAGTGCACAGCATACAGGAATTCGACGAAGCCCTTGAAACAGCCAAAAACAAGCTCGTGGTCGTCGAATTTGCCGCCAGCCACAGCGCCCAGAGCAGAGACATGTACCCTTTTATGGTGGACCTCAGCCGTACGTGCAATGACGTGGAGTTCCTGCTGGTAATGGGGGACGAATCAGAAAAGACCAGAGAGCTCTTCAGAAGAGAGAAAATTGAAAAAGTCCCCCATTTCAGCTTCTACAAAAGCATGGAGAAAATCCACGAAGAGGAAGGAATAGACGGAGATCGGCTTAGGGGAGATGTGCTGTATTACGGGGACAACCACTCTGCTGTGGTTCAACTGCATCAGAGGGAGGACGTGGAGAAGTTGATTGCAGAGCATAAGGTGGACCACAAGCTGATTGTGCTTGATGTGGGGCTCAAGCACTGTGGGCCCTGTGTGAAGGTGTATCCGACGGTGGTGAAGCTGTCGAGGAAGATGTCAGACACGGTGGTGTTCGCGAGAATGAACGGTGATGAGAATGATAGCTGCCTGCAGTTCCTCAAGGACATGGAGGTGGTGGAGGTGCCTACTTTCTTGTTCATTAGAGATGGTGAGATTTGCGGGAGGTATGTGGGCTCTGGTAAAGGGGAGCTTATTGGTGAGATTCTGAGATACCAAGGAGTCCGTGTGACTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009636 GO:0009941 GO:0009987 GO:0010035 GO:0015035 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0031967 GO:0031975 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0047134 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

301

Amino Acids

34.03

Weight (kDa)

6.14

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76080
fragaria_vesca	FvH4_2g37930
malus_domestica	MD08G1007500.v1.1 MD15G1006700.v1.1
prunus_persica	Prupe.1G359300_v2.0.a1
pyrus_communis	pycom08g00610 pycom15g00530
rosa_chinensis	RchiOBHm_Chr6g0303681
rosa_laevigata	RLG00000011057
rosa_roxburghii	Rroxscaffold_7G00164490
rosa_rugosa	Rorug06G0323900
rosa_samantha	Rh6AG438200 Rh6BG464900 Rh6CG450500 Rh6DG437100
rosa_wichuraiana	Rw6G037920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	787
AccI	GTMKAC	1 cut(s)	122
AccII	CGCG	1 cut(s)	722
AciI	CCGC	3 cut(s)	180, 297, 825
AcsI	RAATTY	2 cut(s)	242, 290
AcuI	CTGAAG	1 cut(s)	403
AfaI	GTAC	3 cut(s)	74, 329, 355
AfiI	CCNNNNNNNGG	2 cut(s)	337, 487
AflIII	ACRYGT	1 cut(s)	324
AgsI	TTSAA	5 cut(s)	51, 154, 260, 437, 560
AjiI	CACGTC	2 cut(s)	367, 580
AjnI	CCWGG	1 cut(s)	184
AleI	CACNNNNGTG	1 cut(s)	713
AluBI	AGCT	9 cut(s)	96, 159, 277, 415, 456, 619, 688, 750, 856
AluI	AGCT	9 cut(s)	96, 159, 277, 415, 456, 619, 688, 750, 856
Alw21I	GWGCWC	2 cut(s)	231, 417
Alw26I	GTCTC	1 cut(s)	315
Alw44I	GTGCAC	1 cut(s)	227
AoxI	GGCC	1 cut(s)	653
ApaI	GGGCCC	1 cut(s)	657
ApaLI	GTGCAC	1 cut(s)	227
ApeKI	GCWGC	2 cut(s)	220, 750
ApoI	RAATTY	2 cut(s)	242, 290
AspLEI	GCGC	1 cut(s)	311
AspS9I	GGNCC	4 cut(s)	343, 610, 653, 654
AsuHPI	GGTGA	4 cut(s)	694, 746, 827, 875
AvaII	GGWCC	2 cut(s)	343, 610
BaeGI	GKGCMC	2 cut(s)	231, 657
BanI	GGYRCC	1 cut(s)	787
BanII	GRGCYC	4 cut(s)	417, 642, 657, 842
BauI	CACGAG	1 cut(s)	278
Bbv12I	GWGCWC	2 cut(s)	231, 417
BbvCI	CCTCAGC	1 cut(s)	347
BbvI	GCAGC	2 cut(s)	232, 737
BccI	CCATC	1 cut(s)	806
BceAI	ACGGC	1 cut(s)	336
BciT130I	CCWGG	1 cut(s)	186
BciVI	GTATCC	1 cut(s)	681
BcoDI	GTCTC	1 cut(s)	315
BfaI	CTAG	1 cut(s)	131
BfmI	CTRYAG	2 cut(s)	174, 755
BfoI	RGCGCY	1 cut(s)	312
BfuI	GTATCC	1 cut(s)	681
BisI	GCNGC	4 cut(s)	180, 221, 297, 751
BlsI	GCNGC	4 cut(s)	181, 222, 298, 752
Bme1390I	CCNGG	1 cut(s)	186
Bme18I	GGWCC	2 cut(s)	343, 610
BmgBI	CACGTC	2 cut(s)	367, 580
BmgT120I	GGNCC	4 cut(s)	343, 610, 653, 654
BmiI	GGNNCC	2 cut(s)	655, 789
BmrFI	CCNGG	1 cut(s)	186
BmsI	GCATC	1 cut(s)	574
Bpu10I	CCTNAGC	2 cut(s)	347, 512
BpuEI	CTTGAG	2 cut(s)	626, 749
BsaAI	YACGTR	1 cut(s)	357
BsaJI	CCNNGG	3 cut(s)	168, 184, 880
BsaXI	ACNNNNNCTCC	1 cut(s)	876
Bsc4I	CCNNNNNNNGG	2 cut(s)	337, 487
Bse118I	RCCGGY	1 cut(s)	75
Bse1I	ACTGG	1 cut(s)	63
Bse3DI	GCAATG	1 cut(s)	367
BseBI	CCWGG	1 cut(s)	186
BseDI	CCNNGG	3 cut(s)	168, 184, 880
BseLI	CCNNNNNNNGG	2 cut(s)	337, 487
BseMI	GCAATG	1 cut(s)	367
BseMII	CTCAG	2 cut(s)	361, 863
BseNI	ACTGG	1 cut(s)	63
BseSI	GKGCMC	2 cut(s)	231, 657
BseXI	GCAGC	2 cut(s)	232, 737
BsgI	GTGCAG	1 cut(s)	239
Bsh1236I	CGCG	1 cut(s)	722
BshFI	GGCC	1 cut(s)	655
BshNI	GGYRCC	1 cut(s)	787
BsiHKAI	GWGCWC	2 cut(s)	231, 417
BsiSI	CCGG	1 cut(s)	76
BsiWI	CGTACG	1 cut(s)	353
BslFI	GGGAC	3 cut(s)	404, 428, 551
BslI	CCNNNNNNNGG	2 cut(s)	337, 487
BsmAI	GTCTC	1 cut(s)	315
BsmFI	GGGAC	3 cut(s)	404, 428, 551
BsnI	GGCC	1 cut(s)	655
Bsp120I	GGGCCC	1 cut(s)	653
Bsp1286I	GDGCHC	5 cut(s)	231, 417, 642, 657, 842
Bsp143I	GATC	1 cut(s)	505
Bsp68I	TCGCGA	1 cut(s)	722
BspACI	CCGC	3 cut(s)	180, 297, 825
BspANI	GGCC	1 cut(s)	655
BspCNI	CTCAG	2 cut(s)	360, 864
BspFNI	CGCG	1 cut(s)	722
BspLI	GGNNCC	2 cut(s)	655, 789
BspMAI	CTGCAG	1 cut(s)	759
BspQI	GCTCTTC	1 cut(s)	422
BspT107I	GGYRCC	1 cut(s)	787
BsrDI	GCAATG	1 cut(s)	367
BsrFI	RCCGGY	1 cut(s)	75
BsrI	ACTGG	1 cut(s)	63
BssAI	RCCGGY	1 cut(s)	75
BssECI	CCNNGG	3 cut(s)	168, 184, 880
BssMI	GATC	1 cut(s)	505
BssSI	CACGAG	1 cut(s)	278
BssT1I	CCWWGG	2 cut(s)	168, 880
Bst2BI	CACGAG	1 cut(s)	278
Bst2UI	CCWGG	1 cut(s)	186
Bst4CI	ACNGT	5 cut(s)	83, 650, 679, 712, 734
Bst6I	CTCTTC	3 cut(s)	418, 422, 480
BstAPI	GCANNNNNTGC	1 cut(s)	226
BstBAI	YACGTR	1 cut(s)	357
BstC8I	GCNNGC	2 cut(s)	301, 755
BstDEI	CTNAG	5 cut(s)	22, 192, 347, 512, 872
BstFNI	CGCG	1 cut(s)	722
BstH2I	RGCGCY	1 cut(s)	312
BstHHI	GCGC	1 cut(s)	311
BstKTI	GATC	1 cut(s)	508
BstMAI	GTCTC	1 cut(s)	315
BstMBI	GATC	1 cut(s)	505
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 226, 315, 357, 625, 652
BstNI	CCWGG	1 cut(s)	186
BstNSI	RCATGY	1 cut(s)	328
BstSCI	CCNGG	1 cut(s)	184
BstSFI	CTRYAG	2 cut(s)	174, 755
BstSLI	GKGCMC	2 cut(s)	231, 657
BstUI	CGCG	1 cut(s)	722
BstV1I	GCAGC	2 cut(s)	232, 737
BsuI	GTATCC	1 cut(s)	681
BsuRI	GGCC	1 cut(s)	655
BtgZI	GCGATG	1 cut(s)	222
BtrI	CACGTC	2 cut(s)	367, 580
BtsIMutI	CAGTG	3 cut(s)	70, 79, 646
BtuMI	TCGCGA	1 cut(s)	722
Cac8I	GCNNGC	2 cut(s)	301, 755
CfoI	GCGC	1 cut(s)	311
Cfr10I	RCCGGY	1 cut(s)	75
Cfr13I	GGNCC	4 cut(s)	343, 610, 653, 654
Csp6I	GTAC	3 cut(s)	73, 328, 354
CspCI	CAANNNNNGTGG	2 cut(s)	631, 666
CviAII	CATG	3 cut(s)	325, 469, 772
CviQI	GTAC	3 cut(s)	73, 328, 354
DdeI	CTNAG	5 cut(s)	22, 192, 347, 512, 872
DpnI	GATC	1 cut(s)	507
DpnII	GATC	1 cut(s)	505
Eam1104I	CTCTTC	3 cut(s)	418, 422, 480
EarI	CTCTTC	3 cut(s)	418, 422, 480
Ecl136II	GAGCTC	1 cut(s)	415
Eco130I	CCWWGG	2 cut(s)	168, 880
Eco24I	GRGCYC	4 cut(s)	417, 642, 657, 842
Eco47I	GGWCC	2 cut(s)	343, 610
Eco53kI	GAGCTC	1 cut(s)	415
Eco57I	CTGAAG	1 cut(s)	403
EcoICRI	GAGCTC	1 cut(s)	415
EcoO109I	RGGNCCY	1 cut(s)	654
EcoRI	GAATTC	1 cut(s)	242
EcoRII	CCWGG	1 cut(s)	184
EcoT14I	CCWWGG	2 cut(s)	168, 880
EcoT38I	GRGCYC	4 cut(s)	417, 642, 657, 842
ErhI	CCWWGG	2 cut(s)	168, 880
FaeI	CATG	3 cut(s)	328, 472, 775
FaiI	YATR	7 cut(s)	236, 326, 338, 470, 603, 773, 834
FalI	AAGNNNNNCTT	2 cut(s)	840, 872
FaqI	GGGAC	3 cut(s)	404, 428, 551
FatI	CATG	3 cut(s)	324, 468, 771
FauI	CCCGC	1 cut(s)	818
FblI	GTMKAC	1 cut(s)	122
Fnu4HI	GCNGC	4 cut(s)	180, 221, 297, 751
FriOI	GRGCYC	4 cut(s)	417, 642, 657, 842
Fsp4HI	GCNGC	4 cut(s)	180, 221, 297, 751
FspBI	CTAG	1 cut(s)	131
GlaI	GCGC	1 cut(s)	310
GluI	GCNGC	4 cut(s)	180, 221, 297, 751
HaeII	RGCGCY	1 cut(s)	312
HaeIII	GGCC	1 cut(s)	655
HapII	CCGG	1 cut(s)	76
HhaI	GCGC	1 cut(s)	311
Hin1II	CATG	3 cut(s)	328, 472, 775
Hin6I	GCGC	1 cut(s)	309
HinP1I	GCGC	1 cut(s)	309
HincII	GTYRAC	2 cut(s)	103, 123
HindII	GTYRAC	2 cut(s)	103, 123
HindIII	AAGCTT	1 cut(s)	94
HinfI	GANTC	3 cut(s)	395, 868, 885
HpaII	CCGG	1 cut(s)	76
HphI	GGTGA	4 cut(s)	694, 746, 827, 875
Hpy166II	GTNNAC	5 cut(s)	103, 123, 229, 343, 610
Hpy188I	TCNGA	6 cut(s)	400, 422, 570, 675, 706, 873
Hpy188III	TCNNGA	1 cut(s)	721
Hpy8I	GTNNAC	5 cut(s)	103, 123, 229, 343, 610
Hpy99I	CGWCG	3 cut(s)	251, 290, 679
HpyAV	CCTTC	3 cut(s)	45, 485, 658
HpyCH4III	ACNGT	5 cut(s)	83, 650, 679, 712, 734
HpyCH4IV	ACGT	3 cut(s)	356, 366, 579
HpyCH4V	TGCA	6 cut(s)	220, 229, 360, 565, 596, 757
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 226, 315, 357, 625, 652
HpyF3I	CTNAG	5 cut(s)	22, 192, 347, 512, 872
HpySE526I	ACGT	3 cut(s)	356, 366, 579
Hsp92II	CATG	3 cut(s)	328, 472, 775
HspAI	GCGC	1 cut(s)	309
Kzo9I	GATC	1 cut(s)	505
LguI	GCTCTTC	1 cut(s)	422
LmnI	GCTCC	1 cut(s)	853
Lsp1109I	GCAGC	2 cut(s)	232, 737
LweI	GCATC	1 cut(s)	574
MaeI	CTAG	1 cut(s)	131
MaeII	ACGT	3 cut(s)	356, 366, 579
MaeIII	GTNAC	1 cut(s)	892
MalI	GATC	1 cut(s)	507
MboI	GATC	1 cut(s)	505
MboII	GAAGA	5 cut(s)	39, 409, 435, 497, 709
MhlI	GDGCHC	5 cut(s)	231, 417, 642, 657, 842
MluCI	AATT	3 cut(s)	242, 290, 432
MlyI	GAGTC	1 cut(s)	894
MmeI	TCCRAC	1 cut(s)	698
MseI	TTAA	1 cut(s)	92
MslI	CAYNNNNRTG	2 cut(s)	713, 776
MspI	CCGG	1 cut(s)	76
MspR9I	CCNGG	1 cut(s)	186
MvaI	CCWGG	1 cut(s)	186
MvnI	CGCG	1 cut(s)	722
MwoI	GCNNNNNNNGC	6 cut(s)	179, 226, 315, 357, 625, 652
NdeII	GATC	1 cut(s)	505
NlaIII	CATG	3 cut(s)	328, 472, 775
NlaIV	GGNNCC	2 cut(s)	655, 789
NmuCI	GTSAC	1 cut(s)	892
NruI	TCGCGA	1 cut(s)	722
NspI	RCATGY	1 cut(s)	328
OliI	CACNNNNGTG	1 cut(s)	713
PciI	ACATGT	1 cut(s)	324
PciSI	GCTCTTC	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	1 cut(s)	285
PfeI	GAWTC	2 cut(s)	395, 868
Pfl23II	CGTACG	1 cut(s)	353
PkrI	GCNGC	4 cut(s)	181, 222, 298, 752
PleI	GAGTC	1 cut(s)	893
PpsI	GAGTC	1 cut(s)	893
Ppu21I	YACGTR	1 cut(s)	357
PscI	ACATGT	1 cut(s)	324
Psp124BI	GAGCTC	1 cut(s)	417
Psp6I	CCWGG	1 cut(s)	184
PspGI	CCWGG	1 cut(s)	184
PspLI	CGTACG	1 cut(s)	353
PspN4I	GGNNCC	2 cut(s)	655, 789
PspOMI	GGGCCC	1 cut(s)	653
PspPI	GGNCC	4 cut(s)	343, 610, 653, 654
PstI	CTGCAG	1 cut(s)	759
RruI	TCGCGA	1 cut(s)	722
RsaI	GTAC	3 cut(s)	74, 329, 355
RsaNI	GTAC	3 cut(s)	73, 328, 354
RseI	CAYNNNNRTG	2 cut(s)	713, 776
SacI	GAGCTC	1 cut(s)	417
SalI	GTCGAC	1 cut(s)	121
SapI	GCTCTTC	1 cut(s)	422
SaqAI	TTAA	1 cut(s)	92
SatI	GCNGC	4 cut(s)	180, 221, 297, 751
Sau3AI	GATC	1 cut(s)	505
Sau96I	GGNCC	4 cut(s)	343, 610, 653, 654
SchI	GAGTC	1 cut(s)	894
ScrFI	CCNGG	1 cut(s)	186
SduI	GDGCHC	5 cut(s)	231, 417, 642, 657, 842
SfaNI	GCATC	1 cut(s)	574
SfcI	CTRYAG	2 cut(s)	174, 755
SinI	GGWCC	2 cut(s)	343, 610
SmiMI	CAYNNNNRTG	2 cut(s)	713, 776
SmlI	CTYRAG	2 cut(s)	641, 764
SmoI	CTYRAG	2 cut(s)	641, 764
Sse9I	AATT	3 cut(s)	242, 290, 432
SsiI	CCGC	3 cut(s)	180, 297, 825
SspMI	CTAG	1 cut(s)	131
SstI	GAGCTC	1 cut(s)	417
StyD4I	CCNGG	1 cut(s)	184
StyI	CCWWGG	2 cut(s)	168, 880
TaaI	ACNGT	5 cut(s)	83, 650, 679, 712, 734
TaiI	ACGT	3 cut(s)	359, 369, 582
TaqI	TCGA	4 cut(s)	122, 246, 288, 692
TasI	AATT	3 cut(s)	242, 290, 432
TauI	GCSGC	2 cut(s)	182, 299
TfiI	GAWTC	2 cut(s)	395, 868
Tru1I	TTAA	1 cut(s)	92
Tru9I	TTAA	1 cut(s)	92
TscAI	CASTG	3 cut(s)	70, 86, 653
TseFI	GTSAC	1 cut(s)	892
TseI	GCWGC	2 cut(s)	220, 750
Tsp45I	GTSAC	1 cut(s)	892
TspDTI	ATGAA	4 cut(s)	27, 225, 743, 793
TspGWI	ACGGA	2 cut(s)	516, 878
TspRI	CASTG	3 cut(s)	70, 86, 653
VneI	GTGCAC	1 cut(s)	227
VpaK11BI	GGWCC	2 cut(s)	343, 610
XapI	RAATTY	2 cut(s)	242, 290
XceI	RCATGY	1 cut(s)	328
XcmI	CCANNNNNNNNNTGG	1 cut(s)	62
XmiI	GTMKAC	1 cut(s)	122
XspI	CTAG	1 cut(s)	131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.