Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005348

Physical Location & Seq

Genomic Coordinates Reverse (-)

33747610 .. 33749646

Gene Structure 2037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G369500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 510 bp

ATGGAGGGTAACAACAAGAAGGGGTACGCGTGGGCAATCTCAGCCGGCCTGAACGCCGCTCTGGCTGCCGTTTCGGCGAAGCTCATCACTCCTCAGATTGTTAGGTATGGTTTGGTGATATTGTTCAATGCGACAATGTGGGGATGTTATGTGAACAGCCTGAAAGCTCTGTCTTCTCTGCAAGCTACTGTCACAAATTTTGCTGCAAACTTCCTGTCTTCTGGTCTAGCTGGATACTTTTTGTTCCAAGAACCGTTATCTTTTCAGTTTAAGTTTTGTGTGGGTATAATGCTATGCCAATCCTCCCCCCACCACAAAAGAAGAAACAGAATCACACATATACATTGGCCATGTCACATTTCTCCTTTTACCACACGAGCGGACGAGCCCATGAAAATTAATGATGATGGTCGAATCTCTATGCCACGCCACATTGAATTGGACGGCACCTTTTGGGTTAATTCAAAGCGAAAGAGCTCTTGTTTTTCCCTTGGAGACATCAAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

170

Amino Acids

18.89

Weight (kDa)

9.6

Isoelectric Point (pI)

47.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30845
fragaria_vesca	FvH4_5g30190 FvH4_5g30190
malus_domestica	MD08G1016500.v1.1 MD13G1087600.v1.1 MD15G1015600.v1.1
prunus_persica	Prupe.1G369500_v2.0.a1 Prupe.1G369500_v2.0.a1
pyrus_communis	pycom08g01430 pycom15g01330
rosa_chinensis	RchiOBHm_Chr6g0272121 RchiOBHm_Chr6g0302381
rosa_laevigata	RLG00000011174 RLG00000013700
rosa_multiflora	Rmu_co8096130.1_g000001 Rmu_sc0013301.1_g000006
rosa_roxburghii	Rroxscaffold_7G00165810 Rroxscaffold_7G00196590
rosa_rugosa	Rorug06G0065800 Rorug06G0313800
rosa_samantha	Rh6AG183000 Rh6AG426900 Rh6BG184100 Rh6BG475800 Rh6CG184200 Rh6DG175900
rosa_wichuraiana	Rw0G009150 Rw6G015750 Rw6G036930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	446
AccBSI	CCGCTC	2 cut(s)	59, 380
AccII	CGCG	1 cut(s)	29
AciI	CCGC	2 cut(s)	57, 380
AcoI	YGGCCR	1 cut(s)	347
AcsI	RAATTY	1 cut(s)	196
AfaI	GTAC	1 cut(s)	26
AflIII	ACRYGT	1 cut(s)	27
AgsI	TTSAA	3 cut(s)	127, 437, 465
AluBI	AGCT	5 cut(s)	82, 167, 185, 230, 477
AluI	AGCT	5 cut(s)	82, 167, 185, 230, 477
Alw21I	GWGCWC	1 cut(s)	479
Alw26I	GTCTC	1 cut(s)	489
AoxI	GGCC	2 cut(s)	46, 347
ApeKI	GCWGC	2 cut(s)	65, 203
ApoI	RAATTY	1 cut(s)	196
ArsI	GACNNNNNNTTYG	2 cut(s)	200, 232
AseI	ATTAAT	1 cut(s)	399
AsuHPI	GGTGA	1 cut(s)	127
BalI	TGGCCA	1 cut(s)	349
BanI	GGYRCC	1 cut(s)	446
BanII	GRGCYC	2 cut(s)	390, 479
BauI	CACGAG	1 cut(s)	375
BbsI	GAAGAC	2 cut(s)	165, 210
Bbv12I	GWGCWC	1 cut(s)	479
BbvI	GCAGC	2 cut(s)	52, 190
BccI	CCATC	1 cut(s)	401
BceAI	ACGGC	2 cut(s)	53, 460
BciVI	GTATCC	1 cut(s)	227
BcoDI	GTCTC	1 cut(s)	489
BfaI	CTAG	1 cut(s)	227
BfuI	GTATCC	1 cut(s)	227
BglI	GCCNNNNNGGC	2 cut(s)	62, 74
BisI	GCNGC	3 cut(s)	57, 66, 204
BlsI	GCNGC	3 cut(s)	58, 67, 205
BmiI	GGNNCC	1 cut(s)	448
BpiI	GAAGAC	2 cut(s)	165, 210
BsaJI	CCNNGG	1 cut(s)	490
Bse118I	RCCGGY	1 cut(s)	44
BseDI	CCNNGG	1 cut(s)	490
BseGI	GGATG	1 cut(s)	149
BseMII	CTCAG	2 cut(s)	54, 107
BseRI	GAGGAG	1 cut(s)	81
BseXI	GCAGC	2 cut(s)	52, 190
Bsh1236I	CGCG	1 cut(s)	29
BshFI	GGCC	2 cut(s)	48, 349
BshNI	GGYRCC	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	479
BsiSI	CCGG	1 cut(s)	45
BsmAI	GTCTC	1 cut(s)	489
BsnI	GGCC	2 cut(s)	48, 349
Bsp1286I	GDGCHC	2 cut(s)	390, 479
BspACI	CCGC	2 cut(s)	57, 380
BspANI	GGCC	2 cut(s)	48, 349
BspCNI	CTCAG	2 cut(s)	53, 106
BspFNI	CGCG	1 cut(s)	29
BspLI	GGNNCC	1 cut(s)	448
BspT107I	GGYRCC	1 cut(s)	446
BsrBI	CCGCTC	2 cut(s)	59, 380
BsrFI	RCCGGY	1 cut(s)	44
BssAI	RCCGGY	1 cut(s)	44
BssECI	CCNNGG	1 cut(s)	490
BssSI	CACGAG	1 cut(s)	375
BssT1I	CCWWGG	1 cut(s)	490
Bst2BI	CACGAG	1 cut(s)	375
Bst4CI	ACNGT	3 cut(s)	190, 255, 507
BstC8I	GCNNGC	2 cut(s)	46, 183
BstDEI	CTNAG	2 cut(s)	40, 93
BstF5I	GGATG	1 cut(s)	149
BstFNI	CGCG	1 cut(s)	29
BstMAI	GTCTC	1 cut(s)	489
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 62, 65, 74
BstUI	CGCG	1 cut(s)	29
BstV1I	GCAGC	2 cut(s)	52, 190
BstV2I	GAAGAC	2 cut(s)	165, 210
BsuI	GTATCC	1 cut(s)	227
BsuRI	GGCC	2 cut(s)	48, 349
BtsCI	GGATG	1 cut(s)	149
Cac8I	GCNNGC	2 cut(s)	46, 183
Cfr10I	RCCGGY	1 cut(s)	44
Csp6I	GTAC	1 cut(s)	25
CviAII	CATG	2 cut(s)	351, 391
CviQI	GTAC	1 cut(s)	25
DdeI	CTNAG	2 cut(s)	40, 93
EaeI	YGGCCR	1 cut(s)	347
Ecl136II	GAGCTC	1 cut(s)	477
Eco130I	CCWWGG	1 cut(s)	490
Eco24I	GRGCYC	2 cut(s)	390, 479
Eco53kI	GAGCTC	1 cut(s)	477
EcoICRI	GAGCTC	1 cut(s)	477
EcoT14I	CCWWGG	1 cut(s)	490
EcoT38I	GRGCYC	2 cut(s)	390, 479
ErhI	CCWWGG	1 cut(s)	490
FaeI	CATG	2 cut(s)	354, 394
FaiI	YATR	9 cut(s)	108, 150, 287, 295, 339, 341, 352, 392, 422
FatI	CATG	2 cut(s)	350, 390
Fnu4HI	GCNGC	3 cut(s)	57, 66, 204
FokI	GGATG	1 cut(s)	156
FriOI	GRGCYC	2 cut(s)	390, 479
Fsp4HI	GCNGC	3 cut(s)	57, 66, 204
FspBI	CTAG	1 cut(s)	227
GluI	GCNGC	3 cut(s)	57, 66, 204
HaeIII	GGCC	2 cut(s)	48, 349
HapII	CCGG	1 cut(s)	45
Hin1II	CATG	2 cut(s)	354, 394
HinfI	GANTC	2 cut(s)	330, 414
HpaII	CCGG	1 cut(s)	45
HphI	GGTGA	1 cut(s)	127
Hpy166II	GTNNAC	1 cut(s)	154
Hpy188I	TCNGA	1 cut(s)	96
Hpy8I	GTNNAC	1 cut(s)	154
HpyAV	CCTTC	1 cut(s)	13
HpyCH4III	ACNGT	3 cut(s)	190, 255, 507
HpyCH4V	TGCA	2 cut(s)	181, 206
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 62, 65, 74
HpyF3I	CTNAG	2 cut(s)	40, 93
Hsp92II	CATG	2 cut(s)	354, 394
KroI	GCCGGC	1 cut(s)	44
KroNI	GCCGGC	1 cut(s)	46
LpnPI	CCDG	7 cut(s)	47, 58, 62, 173, 207, 216, 227
Lsp1109I	GCAGC	2 cut(s)	52, 190
MaeI	CTAG	1 cut(s)	227
MaeIII	GTNAC	3 cut(s)	8, 190, 353
MbiI	CCGCTC	2 cut(s)	59, 380
MboII	GAAGA	3 cut(s)	165, 210, 333
MhlI	GDGCHC	2 cut(s)	390, 479
MlsI	TGGCCA	1 cut(s)	349
MluCI	AATT	4 cut(s)	196, 396, 437, 460
MluI	ACGCGT	1 cut(s)	27
MluNI	TGGCCA	1 cut(s)	349
MnlI	CCTC	2 cut(s)	102, 313
Mox20I	TGGCCA	1 cut(s)	349
MroNI	GCCGGC	1 cut(s)	44
MscI	TGGCCA	1 cut(s)	349
MseI	TTAA	3 cut(s)	270, 399, 459
Msp20I	TGGCCA	1 cut(s)	349
MspI	CCGG	1 cut(s)	45
MvnI	CGCG	1 cut(s)	29
MwoI	GCNNNNNNNGC	4 cut(s)	41, 62, 65, 74
NaeI	GCCGGC	1 cut(s)	46
NgoMIV	GCCGGC	1 cut(s)	44
NlaIII	CATG	2 cut(s)	354, 394
NlaIV	GGNNCC	1 cut(s)	448
NmuCI	GTSAC	2 cut(s)	190, 353
PdiI	GCCGGC	1 cut(s)	46
PfeI	GAWTC	2 cut(s)	330, 414
PkrI	GCNGC	3 cut(s)	58, 67, 205
PshBI	ATTAAT	1 cut(s)	399
Psp124BI	GAGCTC	1 cut(s)	479
PspN4I	GGNNCC	1 cut(s)	448
RsaI	GTAC	1 cut(s)	26
RsaNI	GTAC	1 cut(s)	25
SacI	GAGCTC	1 cut(s)	479
SaqAI	TTAA	3 cut(s)	270, 399, 459
SatI	GCNGC	3 cut(s)	57, 66, 204
SduI	GDGCHC	2 cut(s)	390, 479
SetI	ASST	7 cut(s)	84, 107, 169, 187, 232, 452, 479
Sse9I	AATT	4 cut(s)	196, 396, 437, 460
SsiI	CCGC	2 cut(s)	57, 380
SspMI	CTAG	1 cut(s)	227
SstI	GAGCTC	1 cut(s)	479
StyI	CCWWGG	1 cut(s)	490
TaaI	ACNGT	3 cut(s)	190, 255, 507
TaqI	TCGA	1 cut(s)	412
TasI	AATT	4 cut(s)	196, 396, 437, 460
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	2 cut(s)	330, 414
Tru1I	TTAA	3 cut(s)	270, 399, 459
Tru9I	TTAA	3 cut(s)	270, 399, 459
TseFI	GTSAC	2 cut(s)	190, 353
TseI	GCWGC	2 cut(s)	65, 203
Tsp45I	GTSAC	2 cut(s)	190, 353
TspDTI	ATGAA	1 cut(s)	407
VspI	ATTAAT	1 cut(s)	399
XapI	RAATTY	1 cut(s)	196
XspI	CTAG	1 cut(s)	227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.