Prupe.1G382000_v2.0.a1

protein phosphatase 2C 55

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34379837 .. 34383181
3345 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G382000.3

Sequence Viewer

Length: 1527 bp
ATGCCATCTTCTCATTTGTCAAAGCTTAGGACTGCATTACAGAGATCGATTGTAGGGCAGGAAGGTGGGCTTCAGGACTCACTAGATGGGCTAATTGGGCAAGGAAAATTGTTGTTTGGCAATTCTAAGTTGTTCCAATCCAGACCATTTTCAACTATCTCAGATCTCCATGCGTTTCTTTCACCAGGCACTGTTTTTGCTGCAAGGTCGGATTCACAGTTGGTTAACCAAAGAAAGAACATATCTGTTGTTGGAGAGATTTCGCGTATTATTTCAACCCCATCTGTGTCAGGGCCTTCACTTCAGGTTTGCGGCTATCATATTGATTGTGCGCTTTCTGAGCCCTGTCAGTTTATAACCAGAAGCAAGTTTCAGAATAAACCTATGGCTGCCTGTGGTTCAAGAACTGTAGTTGGGGGATGCTACCCTGATAATTTTACTTCAAGGCGTGGGCTTCTTTCAATGGTACCCGAAAGTTCATGTACATTTTATAACAACAGGAAAGGTTCTGACTGTTTTCAAGCAGCTAGCATGAGTTTGAAAAAAAGAGGGCTATCCAACACTAATGCAATTTTTGGATATTTCATATATGAAGTTGGAAAGAGATGGTCTAATTCCTCCCCAACTAAAGGATCAGGGTCAAGAGAATTTCATAGTTCGTCTACATGCTTATCTGCTGGGACTGCCCATGACGTGTCTTTTGATAATTCTGCTCCTGAGGAGCAACTTTCAAGTTCTGCAGATTCATCTGATCGGAAGGTTACAGATGGAAAGTCCCTAAAACTAACTTCAGGATCATATTACCTGCCCCATCCTGATAAAGAGGAAACTGGCGGGGAGGATGCTCACTTCATTTGTGTGAATGAACAAGCAATAGGGGTGGCAGATGGTGTTGGTGGCTGGGCAGATCTTGGTGTTAATTCTGGATTGTATTCCAGAGAACTGATGTCTAATTCTGTAGCTGCTGTTCAGGAGGAGCCCAAGGGTTCAGTTGACCCTGCTAGGGTATTGGAGAAAGCTCACTCAAGCACAAAGGCCAAGGGTTCCTCAACAGCATGTATCATAGCACTCACAGAACAGGGTATTCATGCAATTAATTTAGGTGACAGTGGGTTCATAGTGGTTCGAGATGGGTGCACCGTCTTTAGATCCCCTGTTCAACAGCATGATTTTAACTTTACCTATCAACTGGAGAGTGGAAGCAACGGTGATCTACCTAGCTCTGGCCAGGTTTTTACAGTTCCTGTTGCACCTGGGGATGTTATAATTGCCGGAACTGATGGCCTGTTTGACAACTTGTATAACAATGAGATTACTGCAGTGGTAGTTCATGCCATAAGAGCTGGCTTGGGGCCTCAGGTGACAGCACAAAAGATAGCGGCATTGGCACGCCAACGAGCTCAGGATAGAGACCGGCAGACACCTTTCTCGACTGCTGCTCAAGATGCAGGGTTCCGTTATTATGGTGGCAAGCTCGATGATATAACTGTTGTAGTTTCATATGTAACCAGTTCGAGTGATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

509

Amino Acids

54.07

Weight (kDa)

6.42

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 356, 492, 1265
Acc36I ACCTGC 1 cut(s) 813
Acc65I GGTACC 1 cut(s) 466
AccB1I GGYRCC 1 cut(s) 466
AccI GTMKAC 1 cut(s) 662
AccII CGCG 1 cut(s) 265
AciI CCGC 3 cut(s) 312, 834, 1379
AclWI GGATC 3 cut(s) 640, 802, 1143
AcoI YGGCCR 1 cut(s) 1225
AcsI RAATTY 1 cut(s) 647
AcuI CTGAAG 3 cut(s) 56, 287, 774
AfaI GTAC 2 cut(s) 468, 484
AfiI CCNNNNNNNGG 3 cut(s) 629, 1003, 1223
AflIII ACRYGT 1 cut(s) 693
AgsI TTSAA 9 cut(s) 153, 276, 402, 444, 462, 521, 541, 732, 1160
AjiI CACGTC 1 cut(s) 694
AjnI CCWGG 3 cut(s) 184, 1227, 1252
AluBI AGCT 8 cut(s) 25, 527, 962, 1019, 1221, 1343, 1400, 1474
AluI AGCT 8 cut(s) 25, 527, 962, 1019, 1221, 1343, 1400, 1474
Alw21I GWGCWC 2 cut(s) 1139, 1402
Alw26I GTCTC 1 cut(s) 1404
Alw44I GTGCAC 1 cut(s) 1135
AlwI GGATC 3 cut(s) 640, 802, 1143
AlwNI CAGNNNCTG 2 cut(s) 191, 1244
AoxI GGCC 5 cut(s) 293, 1035, 1225, 1282, 1352
ApaLI GTGCAC 1 cut(s) 1135
ApeKI GCWGC 5 cut(s) 200, 389, 524, 962, 1436
ApoI RAATTY 1 cut(s) 647
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 1 cut(s) 1095
Asp718I GGTACC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 334
AspS9I GGNCC 2 cut(s) 293, 1352
AsuHPI GGTGA 4 cut(s) 174, 1115, 1220, 1372
AsuNHI GCTAGC 1 cut(s) 527
AxyI CCTNAGG 2 cut(s) 717, 1356
BaeGI GKGCMC 1 cut(s) 1139
BalI TGGCCA 1 cut(s) 1227
BanI GGYRCC 1 cut(s) 466
BanII GRGCYC 3 cut(s) 345, 981, 1402
Bbv12I GWGCWC 2 cut(s) 1139, 1402
BbvI GCAGC 5 cut(s) 187, 376, 536, 949, 1423
BccI CCATC 9 cut(s) 13, 80, 289, 600, 761, 819, 881, 1124, 1274
BcgI CGANNNNNNTGC 2 cut(s) 1116, 1150
BciT130I CCWGG 3 cut(s) 186, 1229, 1254
BcoDI GTCTC 1 cut(s) 1404
BfaI CTAG 4 cut(s) 83, 528, 1002, 1218
BfmI CTRYAG 4 cut(s) 408, 738, 957, 1317
BfuAI ACCTGC 1 cut(s) 813
BglII AGATCT 2 cut(s) 163, 907
BisI GCNGC 7 cut(s) 201, 313, 390, 525, 963, 1380, 1437
BlsI GCNGC 7 cut(s) 202, 314, 391, 526, 964, 1381, 1438
Bme1390I CCNGG 3 cut(s) 186, 1229, 1254
BmgBI CACGTC 1 cut(s) 694
BmgT120I GGNCC 2 cut(s) 293, 1352
BmiI GGNNCC 5 cut(s) 468, 978, 1045, 1353, 1454
BmrFI CCNGG 3 cut(s) 186, 1229, 1254
BmsI GCATC 4 cut(s) 410, 832, 1435, 1510
BmtI GCTAGC 1 cut(s) 531
BpmI CTGGAG 1 cut(s) 1211
Bpu10I CCTNAGC 2 cut(s) 26, 1401
BpuEI CTTGAG 2 cut(s) 1009, 1425
Bsa29I ATCGAT 1 cut(s) 47
BsaI GGTCTC 1 cut(s) 1404
BsaJI CCNNGG 3 cut(s) 981, 1038, 1253
Bsc4I CCNNNNNNNGG 3 cut(s) 629, 1003, 1223
Bse118I RCCGGY 1 cut(s) 1413
Bse1I ACTGG 3 cut(s) 835, 1194, 1509
Bse21I CCTNAGG 2 cut(s) 717, 1356
BseBI CCWGG 3 cut(s) 186, 1229, 1254
BseCI ATCGAT 1 cut(s) 47
BseDI CCNNGG 3 cut(s) 981, 1038, 1253
BseGI GGATG 4 cut(s) 425, 811, 847, 1264
BseLI CCNNNNNNNGG 3 cut(s) 629, 1003, 1223
BseMII CTCAG 5 cut(s) 174, 330, 708, 1370, 1415
BseNI ACTGG 3 cut(s) 835, 1194, 1509
BseRI GAGGAG 2 cut(s) 734, 989
BseSI GKGCMC 1 cut(s) 1139
BseXI GCAGC 5 cut(s) 187, 376, 536, 949, 1423
BseYI CCCAGC 2 cut(s) 677, 900
Bsh1236I CGCG 1 cut(s) 265
BshFI GGCC 5 cut(s) 295, 1037, 1227, 1284, 1354
BshNI GGYRCC 1 cut(s) 466
BshVI ATCGAT 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 1139, 1402
BsiSI CCGG 2 cut(s) 1272, 1414
BslFI GGGAC 2 cut(s) 694, 760
BslI CCNNNNNNNGG 3 cut(s) 629, 1003, 1223
BsmAI GTCTC 1 cut(s) 1404
BsmFI GGGAC 2 cut(s) 694, 760
BsnI GGCC 5 cut(s) 295, 1037, 1227, 1284, 1354
Bso31I GGTCTC 1 cut(s) 1404
Bsp1286I GDGCHC 4 cut(s) 345, 981, 1139, 1402
Bsp1407I TGTACA 1 cut(s) 482
Bsp143I GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
BspACI CCGC 3 cut(s) 312, 834, 1379
BspANI GGCC 5 cut(s) 295, 1037, 1227, 1284, 1354
BspCNI CTCAG 5 cut(s) 173, 331, 709, 1369, 1414
BspDI ATCGAT 1 cut(s) 47
BspFNI CGCG 1 cut(s) 265
BspLI GGNNCC 5 cut(s) 468, 978, 1045, 1353, 1454
BspMAI CTGCAG 2 cut(s) 742, 1321
BspMI ACCTGC 1 cut(s) 813
BspOI GCTAGC 1 cut(s) 531
BspPI GGATC 3 cut(s) 640, 802, 1143
BspT107I GGYRCC 1 cut(s) 466
BspTNI GGTCTC 1 cut(s) 1404
BsrFI RCCGGY 1 cut(s) 1413
BsrGI TGTACA 1 cut(s) 482
BsrI ACTGG 3 cut(s) 835, 1194, 1509
BssAI RCCGGY 1 cut(s) 1413
BssECI CCNNGG 3 cut(s) 981, 1038, 1253
BssMI GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
BssT1I CCWWGG 2 cut(s) 981, 1038
Bst2UI CCWGG 3 cut(s) 186, 1229, 1254
Bst4CI ACNGT 9 cut(s) 193, 219, 409, 515, 1109, 1141, 1208, 1240, 1489
BstAUI TGTACA 1 cut(s) 482
BstC8I GCNNGC 4 cut(s) 529, 1345, 1390, 1472
BstDEI CTNAG 7 cut(s) 26, 126, 160, 339, 717, 1356, 1401
BstF5I GGATG 4 cut(s) 425, 811, 847, 1264
BstFNI CGCG 1 cut(s) 265
BstHHI GCGC 1 cut(s) 334
BstKTI GATC 8 cut(s) 47, 166, 635, 754, 797, 910, 1151, 1213
BstMAI GTCTC 1 cut(s) 1404
BstMBI GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
BstMWI GCNNNNNNNGC 6 cut(s) 97, 340, 683, 1340, 1385, 1445
BstNI CCWGG 3 cut(s) 186, 1229, 1254
BstNSI RCATGY 2 cut(s) 669, 1059
BstSCI CCNGG 3 cut(s) 184, 1227, 1252
BstSFI CTRYAG 4 cut(s) 408, 738, 957, 1317
BstSLI GKGCMC 1 cut(s) 1139
BstUI CGCG 1 cut(s) 265
BstV1I GCAGC 5 cut(s) 187, 376, 536, 949, 1423
BstX2I RGATCY 3 cut(s) 163, 907, 1148
BstYI RGATCY 3 cut(s) 163, 907, 1148
Bsu15I ATCGAT 1 cut(s) 47
Bsu36I CCTNAGG 2 cut(s) 717, 1356
BsuRI GGCC 5 cut(s) 295, 1037, 1227, 1284, 1354
BsuTUI ATCGAT 1 cut(s) 47
BtrI CACGTC 1 cut(s) 694
BtsCI GGATG 4 cut(s) 425, 811, 847, 1264
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 3 cut(s) 189, 1114, 1326
BveI ACCTGC 1 cut(s) 813
Cac8I GCNNGC 4 cut(s) 529, 1345, 1390, 1472
CaiI CAGNNNCTG 2 cut(s) 191, 1244
CfoI GCGC 1 cut(s) 334
Cfr10I RCCGGY 1 cut(s) 1413
Cfr13I GGNCC 2 cut(s) 293, 1352
ClaI ATCGAT 1 cut(s) 47
Csp6I GTAC 2 cut(s) 467, 483
CspCI CAANNNNNGTGG 2 cut(s) 861, 896
CviQI GTAC 2 cut(s) 467, 483
DdeI CTNAG 7 cut(s) 26, 126, 160, 339, 717, 1356, 1401
DpnI GATC 8 cut(s) 46, 165, 634, 753, 796, 909, 1150, 1212
DpnII GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
EaeI YGGCCR 1 cut(s) 1225
Ecl136II GAGCTC 1 cut(s) 1400
Eco130I CCWWGG 2 cut(s) 981, 1038
Eco24I GRGCYC 3 cut(s) 345, 981, 1402
Eco31I GGTCTC 1 cut(s) 1404
Eco53kI GAGCTC 1 cut(s) 1400
Eco57I CTGAAG 3 cut(s) 56, 287, 774
Eco81I CCTNAGG 2 cut(s) 717, 1356
EcoICRI GAGCTC 1 cut(s) 1400
EcoO109I RGGNCCY 2 cut(s) 293, 1352
EcoRII CCWGG 3 cut(s) 184, 1227, 1252
EcoT14I CCWWGG 2 cut(s) 981, 1038
EcoT22I ATGCAT 1 cut(s) 1525
EcoT38I GRGCYC 3 cut(s) 345, 981, 1402
ErhI CCWWGG 2 cut(s) 981, 1038
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FaqI GGGAC 2 cut(s) 694, 760
FauI CCCGC 1 cut(s) 827
FauNDI CATATG 1 cut(s) 1501
FblI GTMKAC 1 cut(s) 662
Fnu4HI GCNGC 7 cut(s) 201, 313, 390, 525, 963, 1380, 1437
FokI GGATG 4 cut(s) 432, 798, 854, 1271
FriOI GRGCYC 3 cut(s) 345, 981, 1402
Fsp4HI GCNGC 7 cut(s) 201, 313, 390, 525, 963, 1380, 1437
FspBI CTAG 4 cut(s) 83, 528, 1002, 1218
GlaI GCGC 1 cut(s) 333
GluI GCNGC 7 cut(s) 201, 313, 390, 525, 963, 1380, 1437
GsaI CCCAGC 2 cut(s) 681, 904
GsuI CTGGAG 1 cut(s) 1211
HaeIII GGCC 5 cut(s) 295, 1037, 1227, 1284, 1354
HapII CCGG 2 cut(s) 1272, 1414
HhaI GCGC 1 cut(s) 334
Hin6I GCGC 1 cut(s) 332
HinP1I GCGC 1 cut(s) 332
HincII GTYRAC 2 cut(s) 226, 994
HindII GTYRAC 2 cut(s) 226, 994
HindIII AAGCTT 1 cut(s) 23
HinfI GANTC 3 cut(s) 77, 212, 743
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 2 cut(s) 1272, 1414
HphI GGTGA 4 cut(s) 174, 1115, 1220, 1372
Hpy166II GTNNAC 4 cut(s) 226, 663, 994, 1137
Hpy188I TCNGA 7 cut(s) 163, 211, 340, 375, 511, 751, 756
Hpy8I GTNNAC 4 cut(s) 226, 663, 994, 1137
HpyAV CCTTC 3 cut(s) 56, 306, 751
HpyCH4III ACNGT 9 cut(s) 193, 219, 409, 515, 1109, 1141, 1208, 1240, 1489
HpyCH4IV ACGT 1 cut(s) 693
HpyF10VI GCNNNNNNNGC 6 cut(s) 97, 340, 683, 1340, 1385, 1445
HpyF3I CTNAG 7 cut(s) 26, 126, 160, 339, 717, 1356, 1401
HpySE526I ACGT 1 cut(s) 693
HspAI GCGC 1 cut(s) 332
KpnI GGTACC 1 cut(s) 470
KspAI GTTAAC 1 cut(s) 226
Kzo9I GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
LmnI GCTCC 3 cut(s) 718, 721, 976
Lsp1109I GCAGC 5 cut(s) 187, 376, 536, 949, 1423
LweI GCATC 4 cut(s) 410, 832, 1435, 1510
MaeI CTAG 4 cut(s) 83, 528, 1002, 1218
MaeII ACGT 1 cut(s) 693
MaeIII GTNAC 4 cut(s) 760, 1103, 1360, 1504
MalI GATC 8 cut(s) 46, 165, 634, 753, 796, 909, 1150, 1212
MboI GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
MflI RGATCY 3 cut(s) 163, 907, 1148
MhlI GDGCHC 4 cut(s) 345, 981, 1139, 1402
MlsI TGGCCA 1 cut(s) 1227
MluNI TGGCCA 1 cut(s) 1227
MlyI GAGTC 1 cut(s) 71
MmeI TCCRAC 4 cut(s) 189, 232, 577, 582
MnlI CCTC 8 cut(s) 542, 628, 712, 817, 832, 967, 1057, 1365
Mox20I TGGCCA 1 cut(s) 1227
Mph1103I ATGCAT 1 cut(s) 1525
MscI TGGCCA 1 cut(s) 1227
MseI TTAA 4 cut(s) 225, 918, 1095, 1173
MslI CAYNNNNRTG 1 cut(s) 857
Msp20I TGGCCA 1 cut(s) 1227
MspI CCGG 2 cut(s) 1272, 1414
MspR9I CCNGG 3 cut(s) 186, 1229, 1254
MvaI CCWGG 3 cut(s) 186, 1229, 1254
MvnI CGCG 1 cut(s) 265
MwoI GCNNNNNNNGC 6 cut(s) 97, 340, 683, 1340, 1385, 1445
NdeI CATATG 1 cut(s) 1501
NdeII GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
NheI GCTAGC 1 cut(s) 527
NlaIV GGNNCC 5 cut(s) 468, 978, 1045, 1353, 1454
NmuCI GTSAC 2 cut(s) 1103, 1360
NsiI ATGCAT 1 cut(s) 1525
NspI RCATGY 2 cut(s) 669, 1059
PfeI GAWTC 2 cut(s) 212, 743
PkrI GCNGC 7 cut(s) 202, 314, 391, 526, 964, 1381, 1438
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
PshBI ATTAAT 1 cut(s) 1095
PsiI TTATAA 3 cut(s) 356, 492, 1265
Psp124BI GAGCTC 1 cut(s) 1402
Psp6I CCWGG 3 cut(s) 184, 1227, 1252
PspFI CCCAGC 2 cut(s) 677, 900
PspGI CCWGG 3 cut(s) 184, 1227, 1252
PspN4I GGNNCC 5 cut(s) 468, 978, 1045, 1353, 1454
PspPI GGNCC 2 cut(s) 293, 1352
PsrI GAACNNNNNNTAC 2 cut(s) 951, 983
PstI CTGCAG 2 cut(s) 742, 1321
PstNI CAGNNNCTG 2 cut(s) 191, 1244
PsuI RGATCY 3 cut(s) 163, 907, 1148
RsaI GTAC 2 cut(s) 468, 484
RsaNI GTAC 2 cut(s) 467, 483
RseI CAYNNNNRTG 1 cut(s) 857
SacI GAGCTC 1 cut(s) 1402
SaqAI TTAA 4 cut(s) 225, 918, 1095, 1173
SatI GCNGC 7 cut(s) 201, 313, 390, 525, 963, 1380, 1437
Sau3AI GATC 8 cut(s) 44, 163, 632, 751, 794, 907, 1148, 1210
Sau96I GGNCC 2 cut(s) 293, 1352
SchI GAGTC 1 cut(s) 71
ScrFI CCNGG 3 cut(s) 186, 1229, 1254
SduI GDGCHC 4 cut(s) 345, 981, 1139, 1402
SfaNI GCATC 4 cut(s) 410, 832, 1435, 1510
SfcI CTRYAG 4 cut(s) 408, 738, 957, 1317
SmiMI CAYNNNNRTG 1 cut(s) 857
SmlI CTYRAG 2 cut(s) 1024, 1440
SmoI CTYRAG 2 cut(s) 1024, 1440
SsiI CCGC 3 cut(s) 312, 834, 1379
SspMI CTAG 4 cut(s) 83, 528, 1002, 1218
SstI GAGCTC 1 cut(s) 1402
StyD4I CCNGG 3 cut(s) 184, 1227, 1252
StyI CCWWGG 2 cut(s) 981, 1038
TaaI ACNGT 9 cut(s) 193, 219, 409, 515, 1109, 1141, 1208, 1240, 1489
TaiI ACGT 1 cut(s) 696
TaqI TCGA 5 cut(s) 47, 1126, 1430, 1476, 1514
TatI WGTACW 1 cut(s) 482
TauI GCSGC 2 cut(s) 315, 1382
TfiI GAWTC 2 cut(s) 212, 743
Tru1I TTAA 4 cut(s) 225, 918, 1095, 1173
Tru9I TTAA 4 cut(s) 225, 918, 1095, 1173
TscAI CASTG 3 cut(s) 196, 1114, 1326
TseFI GTSAC 2 cut(s) 1103, 1360
TseI GCWGC 5 cut(s) 200, 389, 524, 962, 1436
Tsp45I GTSAC 2 cut(s) 1103, 1360
TspGWI ACGGA 1 cut(s) 1445
TspRI CASTG 3 cut(s) 196, 1114, 1326
VneI GTGCAC 1 cut(s) 1135
VspI ATTAAT 1 cut(s) 1095
XapI RAATTY 1 cut(s) 647
XceI RCATGY 2 cut(s) 669, 1059
XmiI GTMKAC 1 cut(s) 662
XspI CTAG 4 cut(s) 83, 528, 1002, 1218
Zsp2I ATGCAT 1 cut(s) 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.