Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012804

Physical Location & Seq

Genomic Coordinates Forward (+)

34758815 .. 34762974

Gene Structure 4160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G389000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGAGGAGGACCGGCACTCTCCTCGTCTCCCTCATCCTCTTCCTTATATTCCCACTTCAATCAATTCTTGCTTTTAATTCTTCCACCACCCAAATCTTGCAGGATGTGTTAAAGAAAATATCGGCCAAGCACAAGTGGTATTTGCAGGACATCAGGGTTTCGAGGTTGGATGCCAGCAGGGTTCGCTTCGGGAGCGCCCAGCGATATGAGTTCCGGGTCGGATTCGGGAAGATCCCCGTAGGGGTCTTGTTCTCCGACGACGTCGCTTCCTGGAAAAAGTTCAGGCAACCCAGAACCCATTTCGGCTCTCTCGTTAAGGAGCTCAGCTCCATGGCTGTAGTTGACACCTTCAAAGTGGAGGGTCCCTTTGAGTTACGGGTCGGCGGCATTCATCACCTCTCCCTTTCATTGCCGATGAACACTACATATAGTGGGTTTAAAAGGGTTCTTGTTGGTAAAGGCATCACTGTTGAAGTAAGTGGAGCTACAGAAGTTTCTGTGTTTCATGCATCTGATCTTGGGTTATCATCAAAAGGAAGTGGTGCTATTGGCAAGGAGAAAAGTGAGTTTTGGCCTATTTGGCATTCATACTGCACACCGTTATTTCCTATTCGTGTTTTAGGGCCTGCAACGTTGGTTGCATACAAGACTCGAAATCCTGATGCCTACATTGAGACCAAATTTATGTCCAAGGAGATAATTGAGTTCTTGCCAGAGAAGTGCTACAGAAGCCATGCTTACAAGAAACGGGCTTGTCCCATTGATTCTTTACGTTTGAGGATATCTATGCTGGAAAGCATTTGGAAAAGCTTTCTTGGTGATAGAATTCGCCAAAGTGGTTTGTCAGGATTTGTTGAAGGGAAAATCAAAGCTTCAACTGTTGTCCGTTTCAAGGTTGAGCTCGAAAGGGAATTTCGGAGGAATGGTGCACTTCAGGGCAAGGCAGGGTGGAGAACTAGGCCGGCCGTTGAACAGGTATGGTTTGAAGTTTTGGCAAGAGTGGAATTTGGGAGGGTGAAGCCTCTCATGGTTAAAGAGATTAGGCCCTTCATTGTAGCAGATTCAATTGCGTGGAGTAGTTTGATGTCTAATATTTCCTTCACCAAGTCCTCATCTGTCCTTGTACCTTCTGAGGCGCTAACGTTGGATGTGAAGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S26

Protein Analysis

387

Amino Acids

43.62

Weight (kDa)

10.07

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47310
fragaria_vesca	FvH4_2g40681 FvH4_2g40681 FvH4_2g40681
malus_domestica	MD08G1040400.v1.1 MD15G1034900.v1.1
prunus_persica	Prupe.1G389000_v2.0.a1 Prupe.1G389000_v2.0.a1
pyrus_communis	pycom08g03260 pycom15g03210
rosa_chinensis	RchiOBHm_Chr6g0299921
rosa_multiflora	Rmu_co8499763.1_g000002
rosa_roxburghii	Rroxscaffold_7G00168270
rosa_rugosa	Rorug06G0293200
rosa_samantha	Rh6AG404600 Rh6BG412900 Rh6CG419000 Rh6DG405800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	264
AciI	CCGC	1 cut(s)	384
AclI	AACGTT	2 cut(s)	632, 1142
AclWI	GGATC	1 cut(s)	226
AcoI	YGGCCR	2 cut(s)	123, 963
AcsI	RAATTY	4 cut(s)	680, 825, 911, 1004
AcuI	CTGAAG	1 cut(s)	917
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	1 cut(s)	1125
AfiI	CCNNNNNNNGG	2 cut(s)	241, 892
AgsI	TTSAA	9 cut(s)	59, 352, 473, 857, 876, 892, 971, 986, 1065
AjnI	CCWGG	1 cut(s)	269
AluBI	AGCT	6 cut(s)	322, 327, 485, 810, 872, 901
AluI	AGCT	6 cut(s)	322, 327, 485, 810, 872, 901
Alw21I	GWGCWC	3 cut(s)	324, 903, 931
Alw26I	GTCTC	2 cut(s)	31, 668
Alw44I	GTGCAC	1 cut(s)	927
AlwI	GGATC	1 cut(s)	226
AoxI	GGCC	6 cut(s)	123, 572, 623, 959, 963, 1043
ApaLI	GTGCAC	1 cut(s)	927
ApoI	RAATTY	4 cut(s)	680, 825, 911, 1004
Asp700I	GAANNNNTTC	1 cut(s)	278
AspLEI	GCGC	2 cut(s)	197, 1138
AspS9I	GGNCC	4 cut(s)	9, 362, 623, 1044
AsuC2I	CCSGG	1 cut(s)	215
AsuHPI	GGTGA	4 cut(s)	386, 830, 1027, 1093
AvaII	GGWCC	2 cut(s)	9, 362
BaeGI	GKGCMC	1 cut(s)	931
BanII	GRGCYC	2 cut(s)	324, 903
Bbv12I	GWGCWC	3 cut(s)	324, 903, 931
BceAI	ACGGC	1 cut(s)	950
BcgI	CGANNNNNNTGC	2 cut(s)	4, 38
BciT130I	CCWGG	1 cut(s)	271
BcnI	CCSGG	1 cut(s)	215
BcoDI	GTCTC	2 cut(s)	31, 668
BfaI	CTAG	1 cut(s)	957
BfmI	CTRYAG	3 cut(s)	336, 486, 724
BfoI	RGCGCY	2 cut(s)	198, 1139
BglI	GCCNNNNNGGC	1 cut(s)	580
BisI	GCNGC	1 cut(s)	385
BlpI	GCTNAGC	1 cut(s)	323
BlsI	GCNGC	1 cut(s)	386
Bme1390I	CCNGG	2 cut(s)	215, 271
Bme18I	GGWCC	2 cut(s)	9, 362
BmgT120I	GGNCC	4 cut(s)	9, 362, 623, 1044
BmiI	GGNNCC	2 cut(s)	363, 364
BmrFI	CCNGG	2 cut(s)	215, 271
BmsI	GCATC	4 cut(s)	160, 471, 518, 652
BplI	GAGNNNNNCTC	2 cut(s)	311, 343
Bpu1102I	GCTNAGC	1 cut(s)	323
BpuMI	CCSGG	1 cut(s)	215
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	668
BsaJI	CCNNGG	2 cut(s)	330, 690
BsaXI	ACNNNNNCTCC	2 cut(s)	910, 940
Bsc4I	CCNNNNNNNGG	2 cut(s)	241, 892
Bse118I	RCCGGY	2 cut(s)	11, 961
Bse3DI	GCAATG	1 cut(s)	407
BseBI	CCWGG	1 cut(s)	271
BseDI	CCNNGG	2 cut(s)	330, 690
BseGI	GGATG	4 cut(s)	33, 109, 175, 1153
BseLI	CCNNNNNNNGG	2 cut(s)	241, 892
BseMI	GCAATG	1 cut(s)	407
BseMII	CTCAG	2 cut(s)	337, 1122
BseRI	GAGGAG	2 cut(s)	11, 19
BseSI	GKGCMC	1 cut(s)	931
BseX3I	CGGCCG	1 cut(s)	963
BseYI	CCCAGC	1 cut(s)	198
BsgI	GTGCAG	1 cut(s)	577
Bsh1285I	CGRYCG	1 cut(s)	966
BshFI	GGCC	6 cut(s)	125, 574, 625, 961, 965, 1045
BsiEI	CGRYCG	1 cut(s)	966
BsiHKAI	GWGCWC	3 cut(s)	324, 903, 931
BsiSI	CCGG	3 cut(s)	12, 214, 962
BslFI	GGGAC	2 cut(s)	348, 741
BslI	CCNNNNNNNGG	2 cut(s)	241, 892
BsmAI	GTCTC	2 cut(s)	31, 668
BsmBI	CGTCTC	1 cut(s)	31
BsmFI	GGGAC	2 cut(s)	348, 741
BsmI	GAATGC	2 cut(s)	387, 583
BsnI	GGCC	6 cut(s)	125, 574, 625, 961, 965, 1045
Bso31I	GGTCTC	1 cut(s)	668
Bsp1286I	GDGCHC	3 cut(s)	324, 903, 931
Bsp143I	GATC	2 cut(s)	231, 514
Bsp1720I	GCTNAGC	1 cut(s)	323
Bsp19I	CCATGG	1 cut(s)	330
BspACI	CCGC	1 cut(s)	384
BspANI	GGCC	6 cut(s)	125, 574, 625, 961, 965, 1045
BspCNI	CTCAG	2 cut(s)	336, 1123
BspLI	GGNNCC	2 cut(s)	363, 364
BspPI	GGATC	1 cut(s)	226
BspTNI	GGTCTC	1 cut(s)	668
BsrDI	GCAATG	1 cut(s)	407
BsrFI	RCCGGY	2 cut(s)	11, 961
BssAI	RCCGGY	2 cut(s)	11, 961
BssECI	CCNNGG	2 cut(s)	330, 690
BssMI	GATC	2 cut(s)	231, 514
BssNI	GRCGYC	1 cut(s)	261
BssT1I	CCWWGG	2 cut(s)	330, 690
Bst2UI	CCWGG	1 cut(s)	271
Bst4CI	ACNGT	3 cut(s)	469, 600, 880
Bst6I	CTCTTC	1 cut(s)	44
BstACI	GRCGYC	1 cut(s)	261
BstC8I	GCNNGC	3 cut(s)	175, 627, 963
BstDEI	CTNAG	2 cut(s)	323, 1131
BstDSI	CCRYGG	1 cut(s)	330
BstF5I	GGATG	4 cut(s)	33, 109, 175, 1153
BstH2I	RGCGCY	2 cut(s)	198, 1139
BstHHI	GCGC	2 cut(s)	197, 1138
BstKTI	GATC	2 cut(s)	234, 517
BstMAI	GTCTC	2 cut(s)	31, 668
BstMBI	GATC	2 cut(s)	231, 514
BstMCI	CGRYCG	1 cut(s)	966
BstMWI	GCNNNNNNNGC	4 cut(s)	183, 192, 580, 729
BstNI	CCWGG	1 cut(s)	271
BstSCI	CCNGG	2 cut(s)	213, 269
BstSFI	CTRYAG	3 cut(s)	336, 486, 724
BstSLI	GKGCMC	1 cut(s)	931
BstX2I	RGATCY	1 cut(s)	231
BstYI	RGATCY	1 cut(s)	231
BstZI	CGGCCG	1 cut(s)	963
BsuRI	GGCC	6 cut(s)	125, 574, 625, 961, 965, 1045
BtgI	CCRYGG	1 cut(s)	330
BtsCI	GGATG	4 cut(s)	33, 109, 175, 1153
BtsIMutI	CAGTG	1 cut(s)	465
Cac8I	GCNNGC	3 cut(s)	175, 627, 963
CfoI	GCGC	2 cut(s)	197, 1138
Cfr10I	RCCGGY	2 cut(s)	11, 961
Cfr13I	GGNCC	4 cut(s)	9, 362, 623, 1044
Csp6I	GTAC	1 cut(s)	1124
CviAII	CATG	4 cut(s)	331, 506, 734, 1027
CviQI	GTAC	1 cut(s)	1124
DdeI	CTNAG	2 cut(s)	323, 1131
DpnI	GATC	2 cut(s)	233, 516
DpnII	GATC	2 cut(s)	231, 514
DraI	TTTAAA	1 cut(s)	439
EaeI	YGGCCR	2 cut(s)	123, 963
EagI	CGGCCG	1 cut(s)	963
Eam1104I	CTCTTC	1 cut(s)	44
EarI	CTCTTC	1 cut(s)	44
Ecl136II	GAGCTC	2 cut(s)	322, 901
EclXI	CGGCCG	1 cut(s)	963
Eco130I	CCWWGG	2 cut(s)	330, 690
Eco24I	GRGCYC	2 cut(s)	324, 903
Eco31I	GGTCTC	1 cut(s)	668
Eco32I	GATATC	1 cut(s)	783
Eco47I	GGWCC	2 cut(s)	9, 362
Eco52I	CGGCCG	1 cut(s)	963
Eco53kI	GAGCTC	2 cut(s)	322, 901
Eco57I	CTGAAG	1 cut(s)	917
EcoICRI	GAGCTC	2 cut(s)	322, 901
EcoO109I	RGGNCCY	3 cut(s)	362, 623, 1044
EcoRI	GAATTC	1 cut(s)	825
EcoRII	CCWGG	1 cut(s)	269
EcoRV	GATATC	1 cut(s)	783
EcoT14I	CCWWGG	2 cut(s)	330, 690
EcoT22I	ATGCAT	1 cut(s)	511
EcoT38I	GRGCYC	2 cut(s)	324, 903
ErhI	CCWWGG	2 cut(s)	330, 690
Esp3I	CGTCTC	1 cut(s)	31
FaeI	CATG	4 cut(s)	334, 509, 737, 1030
FalI	AAGNNNNNCTT	2 cut(s)	721, 753
FaqI	GGGAC	2 cut(s)	348, 741
FatI	CATG	4 cut(s)	330, 505, 733, 1026
Fnu4HI	GCNGC	1 cut(s)	385
FokI	GGATG	3 cut(s)	20, 116, 182
FriOI	GRGCYC	2 cut(s)	324, 903
FseI	GGCCGGCC	1 cut(s)	965
Fsp4HI	GCNGC	1 cut(s)	385
FspBI	CTAG	1 cut(s)	957
GlaI	GCGC	2 cut(s)	196, 1137
GluI	GCNGC	1 cut(s)	385
GsaI	CCCAGC	1 cut(s)	202
HaeII	RGCGCY	2 cut(s)	198, 1139
HaeIII	GGCC	6 cut(s)	125, 574, 625, 961, 965, 1045
HapII	CCGG	3 cut(s)	12, 214, 962
HhaI	GCGC	2 cut(s)	197, 1138
Hin1I	GRCGYC	1 cut(s)	261
Hin1II	CATG	4 cut(s)	334, 509, 737, 1030
Hin6I	GCGC	2 cut(s)	195, 1136
HinP1I	GCGC	2 cut(s)	195, 1136
HincII	GTYRAC	1 cut(s)	343
HindII	GTYRAC	1 cut(s)	343
HindIII	AAGCTT	2 cut(s)	808, 870
HinfI	GANTC	4 cut(s)	222, 649, 764, 1061
HpaII	CCGG	3 cut(s)	12, 214, 962
HphI	GGTGA	4 cut(s)	386, 830, 1027, 1093
Hpy166II	GTNNAC	2 cut(s)	343, 929
Hpy188I	TCNGA	5 cut(s)	221, 256, 514, 918, 1132
Hpy188III	TCNNGA	4 cut(s)	190, 226, 659, 846
Hpy8I	GTNNAC	2 cut(s)	343, 929
Hpy99I	CGWCG	3 cut(s)	260, 263, 266
HpyAV	CCTTC	5 cut(s)	358, 851, 1057, 1108, 1137
HpyCH4III	ACNGT	3 cut(s)	469, 600, 880
HpyCH4IV	ACGT	4 cut(s)	261, 632, 772, 1142
HpyCH4V	TGCA	7 cut(s)	100, 145, 509, 594, 629, 641, 929
HpyF10VI	GCNNNNNNNGC	4 cut(s)	183, 192, 580, 729
HpyF3I	CTNAG	2 cut(s)	323, 1131
HpySE526I	ACGT	4 cut(s)	261, 632, 772, 1142
Hsp92I	GRCGYC	1 cut(s)	261
Hsp92II	CATG	4 cut(s)	334, 509, 737, 1030
HspAI	GCGC	2 cut(s)	195, 1136
KflI	GGGWCCC	1 cut(s)	362
KroI	GCCGGC	1 cut(s)	961
KroNI	GCCGGC	1 cut(s)	963
Kzo9I	GATC	2 cut(s)	231, 514
LmnI	GCTCC	4 cut(s)	192, 319, 332, 482
LweI	GCATC	4 cut(s)	160, 471, 518, 652
MaeI	CTAG	1 cut(s)	957
MaeII	ACGT	4 cut(s)	261, 632, 772, 1142
MaeIII	GTNAC	1 cut(s)	372
MalI	GATC	2 cut(s)	233, 516
MboI	GATC	2 cut(s)	231, 514
MboII	GAAGA	3 cut(s)	31, 72, 241
MfeI	CAATTG	1 cut(s)	1065
MflI	RGATCY	1 cut(s)	231
MhlI	GDGCHC	3 cut(s)	324, 903, 931
MluCI	AATT	8 cut(s)	63, 76, 680, 699, 825, 911, 1004, 1065
MlyI	GAGTC	1 cut(s)	643
MmeI	TCCRAC	4 cut(s)	147, 199, 279, 1125
Mph1103I	ATGCAT	1 cut(s)	511
MroNI	GCCGGC	1 cut(s)	961
MroXI	GAANNNNTTC	1 cut(s)	278
MseI	TTAA	5 cut(s)	75, 110, 315, 438, 1032
MspI	CCGG	3 cut(s)	12, 214, 962
MspR9I	CCNGG	2 cut(s)	215, 271
MunI	CAATTG	1 cut(s)	1065
Mva1269I	GAATGC	2 cut(s)	387, 583
MvaI	CCWGG	1 cut(s)	271
MwoI	GCNNNNNNNGC	4 cut(s)	183, 192, 580, 729
NaeI	GCCGGC	1 cut(s)	963
NciI	CCSGG	1 cut(s)	215
NcoI	CCATGG	1 cut(s)	330
NdeII	GATC	2 cut(s)	231, 514
NgoMIV	GCCGGC	1 cut(s)	961
NlaIII	CATG	4 cut(s)	334, 509, 737, 1030
NlaIV	GGNNCC	2 cut(s)	363, 364
NsiI	ATGCAT	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PctI	GAATGC	2 cut(s)	387, 583
PdiI	GCCGGC	1 cut(s)	963
PdmI	GAANNNNTTC	1 cut(s)	278
PfeI	GAWTC	3 cut(s)	222, 764, 1061
PflFI	GACNNNGTC	1 cut(s)	260
PfoI	TCCNGGA	1 cut(s)	269
PkrI	GCNGC	1 cut(s)	386
PleI	GAGTC	1 cut(s)	643
PpsI	GAGTC	1 cut(s)	643
PpuMI	RGGWCCY	1 cut(s)	362
Psp124BI	GAGCTC	2 cut(s)	324, 903
Psp1406I	AACGTT	2 cut(s)	632, 1142
Psp5II	RGGWCCY	1 cut(s)	362
Psp6I	CCWGG	1 cut(s)	269
PspFI	CCCAGC	1 cut(s)	198
PspGI	CCWGG	1 cut(s)	269
PspN4I	GGNNCC	2 cut(s)	363, 364
PspPI	GGNCC	4 cut(s)	9, 362, 623, 1044
PspPPI	RGGWCCY	1 cut(s)	362
PsuI	RGATCY	1 cut(s)	231
PsyI	GACNNNGTC	1 cut(s)	260
RigI	GGCCGGCC	1 cut(s)	965
RsaI	GTAC	1 cut(s)	1125
RsaNI	GTAC	1 cut(s)	1124
SacI	GAGCTC	2 cut(s)	324, 903
SaqAI	TTAA	5 cut(s)	75, 110, 315, 438, 1032
SatI	GCNGC	1 cut(s)	385
Sau3AI	GATC	2 cut(s)	231, 514
Sau96I	GGNCC	4 cut(s)	9, 362, 623, 1044
SchI	GAGTC	1 cut(s)	643
ScrFI	CCNGG	2 cut(s)	215, 271
SduI	GDGCHC	3 cut(s)	324, 903, 931
SfaNI	GCATC	4 cut(s)	160, 471, 518, 652
SfcI	CTRYAG	3 cut(s)	336, 486, 724
SinI	GGWCC	2 cut(s)	9, 362
Sse9I	AATT	8 cut(s)	63, 76, 680, 699, 825, 911, 1004, 1065
SsiI	CCGC	1 cut(s)	384
SspI	AATATT	1 cut(s)	1093
SspMI	CTAG	1 cut(s)	957
SstI	GAGCTC	2 cut(s)	324, 903
StyD4I	CCNGG	2 cut(s)	213, 269
StyI	CCWWGG	2 cut(s)	330, 690
TaaI	ACNGT	3 cut(s)	469, 600, 880
TaiI	ACGT	4 cut(s)	264, 635, 775, 1145
TaqI	TCGA	3 cut(s)	161, 652, 903
TasI	AATT	8 cut(s)	63, 76, 680, 699, 825, 911, 1004, 1065
TauI	GCSGC	1 cut(s)	387
TfiI	GAWTC	3 cut(s)	222, 764, 1061
Tru1I	TTAA	5 cut(s)	75, 110, 315, 438, 1032
Tru9I	TTAA	5 cut(s)	75, 110, 315, 438, 1032
TscAI	CASTG	1 cut(s)	472
TspDTI	ATGAA	6 cut(s)	380, 396, 431, 494, 576, 1039
TspGWI	ACGGA	1 cut(s)	875
TspRI	CASTG	1 cut(s)	472
Tth111I	GACNNNGTC	1 cut(s)	260
VneI	GTGCAC	1 cut(s)	927
VpaK11BI	GGWCC	2 cut(s)	9, 362
XapI	RAATTY	4 cut(s)	680, 825, 911, 1004
XmnI	GAANNNNTTC	1 cut(s)	278
XspI	CTAG	1 cut(s)	957
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.