Rh6AG404600

Signal peptidase, peptidase S26

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0012804
Physical Location & Seq
Reverse (-)
60121191 .. 60123116
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG404600.1

Sequence Viewer

Length: 849 bp
ATGGCTGCAGTTGACACCTTCAAAGTGGAGGGGCCGTTTGAGTTACGAGTCGGTTCAGACCATGACCTCTCCCTTTCATTGCCGATGAACACTACGTATAGTAGAGGGTTGAAAAGGGTGCTTGTTGGTGAAGGCATTACTGTTGAGGTAACGAGAGCAACAGAAGTTTCTGTGTTTCATGCATCTGATCTTGGTGTGGCGATGAACGGAAGTGATACTATTGACAAGGAGAAAAGTGAGTTTTGGCCATTTTGGCATTCATATTGCGCGCCATTAGTTCCCATTCGCGTTGTAGGGCCTGCATCGTTGGTTGCATACAGGACTAGAAATCCTGCTGCTCACATTGAAACTAAATTTATGTCCAAGGATATAATTGAGTTGTTGCCAGAGAAATGCTTCAGCAGCCATCGTACATACAAGAAGCAGAAGCAGTCTTGCCCCATTGATTCTTTAAGTTTGAAAATATCTATGCTGGAAAGAATTTGGAAAGGCTTTCTTGGTGATAGGATTCGACAAAAAGGACTGTCCGGATTTCTTGAAGCAAAAATCAAAGCCTCAACTATTGTTCGGTTCAAGCTTCAGCTGGAAAGGGATTTTAGGAGGAAGGGGATACTCCAGCAGGACATTGCGGGATGGAGGACCAGGTCTGCTGTGGAAAGGGTTTGGTTTGAAGTTTTGGCGACAGTTGAATTAGAGAGGTTGAGGCTTAGCCCTATCTTGGTTAAAAAGATAAGGCCATTCATTATAGCAGATTCAGTTGAATGGGATAATCCTTCGAATATTTCCTTTACCAAATCCCAATCTATCCTTGTCGCTTCTGAAGCGCTTACGTTGGATGTGAAATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S26

Protein Analysis

282

Amino Acids

32.01

Weight (kDa)

9.47

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 269, 288
AccIII TCCGGA 1 cut(s) 527
AciI CCGC 1 cut(s) 629
AcoI YGGCCR 1 cut(s) 245
AcsI RAATTY 2 cut(s) 353, 480
AcuI CTGAAG 3 cut(s) 382, 563, 840
AfaI GTAC 1 cut(s) 412
AfeI AGCGCT 1 cut(s) 825
AfiI CCNNNNNNNGG 1 cut(s) 718
AgsI TTSAA 9 cut(s) 22, 112, 347, 460, 539, 574, 671, 689, 761
AjnI CCWGG 1 cut(s) 641
AluBI AGCT 2 cut(s) 577, 583
AluI AGCT 2 cut(s) 577, 583
Aor13HI TCCGGA 1 cut(s) 527
Aor51HI AGCGCT 1 cut(s) 825
AoxI GGCC 4 cut(s) 32, 245, 296, 734
ApeKI GCWGC 3 cut(s) 5, 335, 402
ApoI RAATTY 2 cut(s) 353, 480
Asp700I GAANNNNTTC 1 cut(s) 395
AspLEI GCGC 3 cut(s) 269, 271, 826
AspS9I GGNCC 3 cut(s) 32, 296, 639
AsuHPI GGTGA 2 cut(s) 140, 512
AsuII TTCGAA 1 cut(s) 776
AvaII GGWCC 1 cut(s) 639
BalI TGGCCA 1 cut(s) 247
BbvI GCAGC 2 cut(s) 322, 414
BccI CCATC 2 cut(s) 414, 627
BceAI ACGGC 1 cut(s) 19
BciT130I CCWGG 1 cut(s) 643
BciVI GTATCC 1 cut(s) 603
BfaI CTAG 1 cut(s) 324
BfmI CTRYAG 1 cut(s) 6
BfoI RGCGCY 1 cut(s) 827
BfuI GTATCC 1 cut(s) 603
BglI GCCNNNNNGGC 1 cut(s) 253
BisI GCNGC 3 cut(s) 6, 336, 403
BlpI GCTNAGC 1 cut(s) 707
BlsI GCNGC 3 cut(s) 7, 337, 404
Bme1390I CCNGG 1 cut(s) 643
Bme18I GGWCC 1 cut(s) 639
BmgT120I GGNCC 3 cut(s) 32, 296, 639
BmiI GGNNCC 1 cut(s) 33
BmrFI CCNGG 1 cut(s) 643
BmsI GCATC 2 cut(s) 191, 311
BpmI CTGGAG 1 cut(s) 599
Bpu1102I GCTNAGC 1 cut(s) 707
Bpu14I TTCGAA 1 cut(s) 776
BsaAI YACGTR 1 cut(s) 96
BsaJI CCNNGG 1 cut(s) 363
BsaWI WCCGGW 1 cut(s) 527
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 1 cut(s) 718
Bse3DI GCAATG 2 cut(s) 77, 624
BseAI TCCGGA 1 cut(s) 527
BseBI CCWGG 1 cut(s) 643
BseDI CCNNGG 1 cut(s) 363
BseGI GGATG 2 cut(s) 638, 841
BseLI CCNNNNNNNGG 1 cut(s) 718
BseMI GCAATG 2 cut(s) 77, 624
BsePI GCGCGC 1 cut(s) 267
BseXI GCAGC 2 cut(s) 322, 414
Bsh1236I CGCG 2 cut(s) 269, 288
BshFI GGCC 4 cut(s) 34, 247, 298, 736
BsiSI CCGG 1 cut(s) 528
BslI CCNNNNNNNGG 1 cut(s) 718
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 4 cut(s) 34, 247, 298, 736
Bsp119I TTCGAA 1 cut(s) 776
Bsp13I TCCGGA 1 cut(s) 527
Bsp143I GATC 1 cut(s) 187
Bsp1720I GCTNAGC 1 cut(s) 707
BspACI CCGC 1 cut(s) 629
BspANI GGCC 4 cut(s) 34, 247, 298, 736
BspEI TCCGGA 1 cut(s) 527
BspFNI CGCG 2 cut(s) 269, 288
BspLI GGNNCC 1 cut(s) 33
BspMAI CTGCAG 1 cut(s) 10
BspT104I TTCGAA 1 cut(s) 776
BsrDI GCAATG 2 cut(s) 77, 624
BssECI CCNNGG 1 cut(s) 363
BssHII GCGCGC 1 cut(s) 267
BssMI GATC 1 cut(s) 187
BssT1I CCWWGG 1 cut(s) 363
Bst2UI CCWGG 1 cut(s) 643
Bst4CI ACNGT 3 cut(s) 142, 525, 685
BstBAI YACGTR 1 cut(s) 96
BstBI TTCGAA 1 cut(s) 776
BstC8I GCNNGC 2 cut(s) 269, 300
BstDEI CTNAG 1 cut(s) 707
BstF5I GGATG 2 cut(s) 638, 841
BstFNI CGCG 2 cut(s) 269, 288
BstH2I RGCGCY 1 cut(s) 827
BstHHI GCGC 3 cut(s) 269, 271, 826
BstKTI GATC 1 cut(s) 190
BstMBI GATC 1 cut(s) 187
BstMWI GCNNNNNNNGC 3 cut(s) 253, 402, 821
BstNI CCWGG 1 cut(s) 643
BstSCI CCNGG 1 cut(s) 641
BstSFI CTRYAG 1 cut(s) 6
BstSNI TACGTA 1 cut(s) 96
BstUI CGCG 2 cut(s) 269, 288
BstV1I GCAGC 2 cut(s) 322, 414
BsuI GTATCC 1 cut(s) 603
BsuRI GGCC 4 cut(s) 34, 247, 298, 736
BtgZI GCGATG 1 cut(s) 215
BtsCI GGATG 2 cut(s) 638, 841
Cac8I GCNNGC 2 cut(s) 269, 300
CfoI GCGC 3 cut(s) 269, 271, 826
Cfr13I GGNCC 3 cut(s) 32, 296, 639
CsiI ACCWGGT 1 cut(s) 641
Csp6I GTAC 1 cut(s) 411
CviAII CATG 2 cut(s) 62, 179
CviQI GTAC 1 cut(s) 411
DdeI CTNAG 1 cut(s) 707
DpnI GATC 1 cut(s) 189
DpnII GATC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 245
Eco105I TACGTA 1 cut(s) 96
Eco130I CCWWGG 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 639
Eco47III AGCGCT 1 cut(s) 825
Eco57I CTGAAG 3 cut(s) 382, 563, 840
EcoO109I RGGNCCY 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 641
EcoT14I CCWWGG 1 cut(s) 363
EcoT22I ATGCAT 1 cut(s) 184
ErhI CCWWGG 1 cut(s) 363
FaeI CATG 2 cut(s) 65, 182
FalI AAGNNNNNCTT 2 cut(s) 480, 512
FatI CATG 2 cut(s) 61, 178
FauI CCCGC 1 cut(s) 622
Fnu4HI GCNGC 3 cut(s) 6, 336, 403
FokI GGATG 1 cut(s) 645
Fsp4HI GCNGC 3 cut(s) 6, 336, 403
FspBI CTAG 1 cut(s) 324
GlaI GCGC 3 cut(s) 268, 270, 825
GluI GCNGC 3 cut(s) 6, 336, 403
GsuI CTGGAG 1 cut(s) 599
HaeII RGCGCY 1 cut(s) 827
HaeIII GGCC 4 cut(s) 34, 247, 298, 736
HapII CCGG 1 cut(s) 528
HhaI GCGC 3 cut(s) 269, 271, 826
Hin1II CATG 2 cut(s) 65, 182
Hin6I GCGC 3 cut(s) 267, 269, 824
HinP1I GCGC 3 cut(s) 267, 269, 824
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HindIII AAGCTT 1 cut(s) 575
HinfI GANTC 4 cut(s) 48, 446, 508, 752
HpaII CCGG 1 cut(s) 528
HphI GGTGA 2 cut(s) 140, 512
Hpy166II GTNNAC 1 cut(s) 13
Hpy188I TCNGA 3 cut(s) 58, 187, 820
Hpy188III TCNNGA 2 cut(s) 528, 536
Hpy8I GTNNAC 1 cut(s) 13
HpyAV CCTTC 4 cut(s) 28, 125, 598, 783
HpyCH4III ACNGT 3 cut(s) 142, 525, 685
HpyCH4IV ACGT 2 cut(s) 95, 830
HpyCH4V TGCA 4 cut(s) 8, 182, 302, 314
HpyF10VI GCNNNNNNNGC 3 cut(s) 253, 402, 821
HpyF3I CTNAG 1 cut(s) 707
HpySE526I ACGT 2 cut(s) 95, 830
Hsp92II CATG 2 cut(s) 65, 182
HspAI GCGC 3 cut(s) 267, 269, 824
Kpn2I TCCGGA 1 cut(s) 527
Kzo9I GATC 1 cut(s) 187
Lsp1109I GCAGC 2 cut(s) 322, 414
LweI GCATC 2 cut(s) 191, 311
MabI ACCWGGT 1 cut(s) 641
MaeI CTAG 1 cut(s) 324
MaeII ACGT 2 cut(s) 95, 830
MaeIII GTNAC 2 cut(s) 42, 148
MalI GATC 1 cut(s) 189
MboI GATC 1 cut(s) 187
MlsI TGGCCA 1 cut(s) 247
MluCI AATT 4 cut(s) 353, 372, 480, 689
MluNI TGGCCA 1 cut(s) 247
MlyI GAGTC 1 cut(s) 57
MmeI TCCRAC 1 cut(s) 813
MnlI CCTC 9 cut(s) 22, 77, 98, 139, 565, 594, 630, 690, 696
Mox20I TGGCCA 1 cut(s) 247
Mph1103I ATGCAT 1 cut(s) 184
MroI TCCGGA 1 cut(s) 527
MroXI GAANNNNTTC 1 cut(s) 395
MscI TGGCCA 1 cut(s) 247
MseI TTAA 2 cut(s) 452, 723
Msp20I TGGCCA 1 cut(s) 247
MspA1I CMGCKG 1 cut(s) 583
MspI CCGG 1 cut(s) 528
MspR9I CCNGG 1 cut(s) 643
Mva1269I GAATGC 1 cut(s) 256
MvaI CCWGG 1 cut(s) 643
MvnI CGCG 2 cut(s) 269, 288
MwoI GCNNNNNNNGC 3 cut(s) 253, 402, 821
NdeII GATC 1 cut(s) 187
NlaIII CATG 2 cut(s) 65, 182
NlaIV GGNNCC 1 cut(s) 33
NsiI ATGCAT 1 cut(s) 184
NspV TTCGAA 1 cut(s) 776
PauI GCGCGC 1 cut(s) 267
PctI GAATGC 1 cut(s) 256
PdmI GAANNNNTTC 1 cut(s) 395
PfeI GAWTC 3 cut(s) 446, 508, 752
PflFI GACNNNGTC 1 cut(s) 643
PkrI GCNGC 3 cut(s) 7, 337, 404
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
Ppu21I YACGTR 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 641
PspGI CCWGG 1 cut(s) 641
PspN4I GGNNCC 1 cut(s) 33
PspPI GGNCC 3 cut(s) 32, 296, 639
PstI CTGCAG 1 cut(s) 10
PsyI GACNNNGTC 1 cut(s) 643
PteI GCGCGC 1 cut(s) 267
PvuII CAGCTG 1 cut(s) 583
RsaI GTAC 1 cut(s) 412
RsaNI GTAC 1 cut(s) 411
SaqAI TTAA 2 cut(s) 452, 723
SatI GCNGC 3 cut(s) 6, 336, 403
Sau3AI GATC 1 cut(s) 187
Sau96I GGNCC 3 cut(s) 32, 296, 639
SchI GAGTC 1 cut(s) 57
ScrFI CCNGG 1 cut(s) 643
SetI ASST 9 cut(s) 20, 69, 98, 150, 579, 585, 647, 701, 833
SexAI ACCWGGT 1 cut(s) 641
SfaNI GCATC 2 cut(s) 191, 311
SfcI CTRYAG 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 776
SinI GGWCC 1 cut(s) 639
SnaBI TACGTA 1 cut(s) 96
Sse9I AATT 4 cut(s) 353, 372, 480, 689
SsiI CCGC 1 cut(s) 629
SspI AATATT 1 cut(s) 781
SspMI CTAG 1 cut(s) 324
StyD4I CCNGG 1 cut(s) 641
StyI CCWWGG 1 cut(s) 363
TaaI ACNGT 3 cut(s) 142, 525, 685
TaiI ACGT 2 cut(s) 98, 833
TaqI TCGA 2 cut(s) 511, 776
TasI AATT 4 cut(s) 353, 372, 480, 689
TfiI GAWTC 3 cut(s) 446, 508, 752
Tru1I TTAA 2 cut(s) 452, 723
Tru9I TTAA 2 cut(s) 452, 723
TseI GCWGC 3 cut(s) 5, 335, 402
TspDTI ATGAA 6 cut(s) 66, 101, 167, 218, 249, 730
TspGWI ACGGA 1 cut(s) 222
Tth111I GACNNNGTC 1 cut(s) 643
VpaK11BI GGWCC 1 cut(s) 639
XapI RAATTY 2 cut(s) 353, 480
XcmI CCANNNNNNNNNTGG 1 cut(s) 649
XmnI GAANNNNTTC 1 cut(s) 395
XspI CTAG 1 cut(s) 324
Zsp2I ATGCAT 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.