Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0005845

Physical Location & Seq

Genomic Coordinates Forward (+)

35503427 .. 35505844

Gene Structure 2418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G403000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 921 bp

ATGCTACCTTTCTTTCTCAGCCCTGTCTCATTATATGCCATCTACGTACGCCGTTGCTTCGCCGCCTCCGGCCTCTCGCAACAAACCCTACAACTCGACAATGAGACCACCCTCCACTTCTGGGGTCCCAACCCCAAATTCTCTCAAGCCACCCAGAAAAAGCCTTCCCTGGTTCTAATCCACGGCTTCGGCCCCGTCGCCATGTGGCAGTGGCGGAACCAAGTCCAGTTCTTCTCCCCCCGCTTCAACGTCTACGTCCCCGACCTCGTCTTCTTCGGCGACTCCACCACCACGTCAGCAGAGAGAAGCGAGGTCTTTCAGGCAGCCTCCGTGGCGAAGCTGATGGAGAAGGCGGGCGTGGAGAGGTTCAGTGTCATTGGGACGAGCTACGGCGGGTTTGTGGCGTACCACGTGGCGAGGATGTGGCCGGAGAGAGTGGAGAAGGTGGTGATTGCCAGCTCTGGGGTTAACATGAGAAGAGGAGATAACGAGAAGTTGCTGAGGAGGGCAAAGTTAGAAAAGATTGAACATCTCATGCTGCCTGCGACGGCGGTGCAGTTGCAGACGTTGATCAGTCTCGCTATGTCCCGGCGTGTTGACGTCATACCCCGTTTTTTATTGAATGATTTCGTGCAGAAATTGTACTCAGATAAAAGGAAGGAAAAGATGGAGCTGCTGAAGGGACTCACACTTGGACGAGATGACACACCAAACCTATCTCCTCTTCCTAACAAGGAGGTTTTGATCGTATGGGGAGATAAAGACCAGATCTTTCCTTTGGAGATGGCTACCGAACTCAAGGAGCTTCTTGGATCCAAAACAAGACTGGAAGTGATAAAGAACACATCGCATGTACCCCAAGTTGAAAATCCCATACAATTCAACAACATTGTAGAAAGCTTCTTGTGCGACTCCTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0008150 GO:0016020 GO:0016787 GO:0016822 GO:0016823 GO:0030312 GO:0034820 GO:0040007 GO:0044110 GO:0044116 GO:0044117 GO:0044403 GO:0044419 GO:0044464 GO:0051704 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

307

Amino Acids

34.77

Weight (kDa)

9.24

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005845)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33180 AT4G33180 AT5G21950 AT5G21950 AT5G21950 AT5G21950 AT5G21950 AT5G21950 AT5G21950
fragaria_vesca	FvH4_2g30850 FvH4_2g30850 FvH4_2g30850 FvH4_2g30850 FvH4_2g30850
malus_domestica	MD15G1048600.v1.1
prunus_persica	Prupe.1G403000_v2.0.a1
pyrus_communis	pycom15g04750
rosa_chinensis	RchiOBHm_Chr6g0312001
rosa_laevigata	RLG00000010362
rosa_multiflora	Rmu_co8393279.1_g000001 Rmu_sc0005381.1_g000007
rosa_roxburghii	Rroxscaffold_7G00157150
rosa_samantha	Rh6AG508500 Rh6BG519800 Rh6CG525700 Rh6DG511200
rosa_wichuraiana	Rw6G044270 Rw6G044280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	603
AccI	GTMKAC	1 cut(s)	252
AciI	CCGC	6 cut(s)	63, 214, 241, 353, 393, 551
AclWI	GGATC	2 cut(s)	807, 820
AcoI	YGGCCR	1 cut(s)	425
AcsI	RAATTY	1 cut(s)	137
AcuI	CTGAAG	1 cut(s)	698
AcvI	CACGTG	1 cut(s)	412
AcyI	GRCGYC	1 cut(s)	600
AfaI	GTAC	4 cut(s)	48, 407, 644, 855
AfiI	CCNNNNNNNGG	2 cut(s)	121, 462
AgsI	TTSAA	5 cut(s)	247, 527, 622, 866, 883
AjiI	CACGTC	1 cut(s)	294
AjnI	CCWGG	1 cut(s)	168
AjuI	GAANNNNNNNTTGG	2 cut(s)	122, 154
AluBI	AGCT	6 cut(s)	340, 387, 459, 673, 805, 900
AluI	AGCT	6 cut(s)	340, 387, 459, 673, 805, 900
Alw26I	GTCTC	3 cut(s)	31, 98, 581
AlwI	GGATC	2 cut(s)	807, 820
AoxI	GGCC	3 cut(s)	70, 190, 425
ApeKI	GCWGC	3 cut(s)	323, 538, 673
ApoI	RAATTY	1 cut(s)	137
Asp700I	GAANNNNTTC	1 cut(s)	626
AspS9I	GGNCC	2 cut(s)	125, 191
AsuC2I	CCSGG	1 cut(s)	589
AsuHPI	GGTGA	1 cut(s)	460
AvaII	GGWCC	1 cut(s)	125
BamHI	GGATCC	1 cut(s)	812
BbrPI	CACGTG	1 cut(s)	412
BbsI	GAAGAC	1 cut(s)	262
BbvCI	CCTCAGC	1 cut(s)	500
BbvI	GCAGC	3 cut(s)	335, 525, 660
BccI	CCATC	4 cut(s)	47, 337, 661, 778
BceAI	ACGGC	4 cut(s)	36, 199, 406, 564
BcgI	CGANNNNNNTGC	2 cut(s)	535, 569
BciT130I	CCWGG	1 cut(s)	170
BclI	TGATCA	1 cut(s)	570
BcnI	CCSGG	1 cut(s)	589
BcoDI	GTCTC	3 cut(s)	31, 98, 581
BglI	GCCNNNNNGGC	1 cut(s)	332
BglII	AGATCT	1 cut(s)	768
BisI	GCNGC	4 cut(s)	63, 324, 539, 674
BlsI	GCNGC	4 cut(s)	64, 325, 540, 675
Bme1390I	CCNGG	2 cut(s)	170, 589
Bme18I	GGWCC	1 cut(s)	125
BmgBI	CACGTC	1 cut(s)	294
BmgT120I	GGNCC	2 cut(s)	125, 191
BmiI	GGNNCC	5 cut(s)	126, 127, 193, 218, 814
BmrFI	CCNGG	2 cut(s)	170, 589
BpiI	GAAGAC	1 cut(s)	262
Bpu10I	CCTNAGC	1 cut(s)	500
BpuEI	CTTGAG	2 cut(s)	129, 782
BpuMI	CCSGG	1 cut(s)	589
BsaAI	YACGTR	2 cut(s)	46, 412
BsaHI	GRCGYC	1 cut(s)	600
BsaI	GGTCTC	1 cut(s)	98
BsaJI	CCNNGG	3 cut(s)	168, 181, 330
Bsc4I	CCNNNNNNNGG	2 cut(s)	121, 462
Bse1I	ACTGG	2 cut(s)	226, 831
BseBI	CCWGG	1 cut(s)	170
BseDI	CCNNGG	3 cut(s)	168, 181, 330
BseGI	GGATG	1 cut(s)	426
BseLI	CCNNNNNNNGG	2 cut(s)	121, 462
BseMII	CTCAG	3 cut(s)	31, 491, 660
BseNI	ACTGG	2 cut(s)	226, 831
BseRI	GAGGAG	4 cut(s)	495, 517, 711, 904
BseXI	GCAGC	3 cut(s)	335, 525, 660
BsgI	GTGCAG	2 cut(s)	575, 653
BshFI	GGCC	3 cut(s)	72, 192, 427
BsiSI	CCGG	3 cut(s)	69, 428, 589
BsiWI	CGTACG	1 cut(s)	46
BslFI	GGGAC	5 cut(s)	111, 242, 394, 571, 696
BslI	CCNNNNNNNGG	2 cut(s)	121, 462
BsmAI	GTCTC	3 cut(s)	31, 98, 581
BsmFI	GGGAC	5 cut(s)	111, 242, 394, 571, 696
BsnI	GGCC	3 cut(s)	72, 192, 427
Bso31I	GGTCTC	1 cut(s)	98
Bsp143I	GATC	4 cut(s)	570, 744, 768, 812
BspACI	CCGC	6 cut(s)	63, 214, 241, 353, 393, 551
BspANI	GGCC	3 cut(s)	72, 192, 427
BspCNI	CTCAG	3 cut(s)	30, 492, 659
BspLI	GGNNCC	5 cut(s)	126, 127, 193, 218, 814
BspPI	GGATC	2 cut(s)	807, 820
BspTNI	GGTCTC	1 cut(s)	98
BsrI	ACTGG	2 cut(s)	226, 831
BssECI	CCNNGG	3 cut(s)	168, 181, 330
BssMI	GATC	4 cut(s)	570, 744, 768, 812
BssNI	GRCGYC	1 cut(s)	600
Bst2UI	CCWGG	1 cut(s)	170
Bst6I	CTCTTC	2 cut(s)	472, 729
BstACI	GRCGYC	1 cut(s)	600
BstBAI	YACGTR	2 cut(s)	46, 412
BstC8I	GCNNGC	3 cut(s)	355, 457, 543
BstDEI	CTNAG	3 cut(s)	17, 500, 646
BstDSI	CCRYGG	2 cut(s)	181, 330
BstF5I	GGATG	1 cut(s)	426
BstKTI	GATC	4 cut(s)	573, 747, 771, 815
BstMAI	GTCTC	3 cut(s)	31, 98, 581
BstMBI	GATC	4 cut(s)	570, 744, 768, 812
BstMWI	GCNNNNNNNGC	2 cut(s)	332, 906
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	1 cut(s)	854
BstSCI	CCNGG	2 cut(s)	168, 587
BstSNI	TACGTA	1 cut(s)	46
BstV1I	GCAGC	3 cut(s)	335, 525, 660
BstV2I	GAAGAC	1 cut(s)	262
BstX2I	RGATCY	2 cut(s)	768, 812
BstYI	RGATCY	2 cut(s)	768, 812
BsuRI	GGCC	3 cut(s)	72, 192, 427
BtgI	CCRYGG	2 cut(s)	181, 330
BtgZI	GCGATG	1 cut(s)	831
BtrI	CACGTC	1 cut(s)	294
BtsCI	GGATG	1 cut(s)	426
BtsI	GCAGTG	1 cut(s)	215
BtsIMutI	CAGTG	2 cut(s)	215, 376
Cac8I	GCNNGC	3 cut(s)	355, 457, 543
Cfr13I	GGNCC	2 cut(s)	125, 191
Csp6I	GTAC	4 cut(s)	47, 406, 643, 854
CviAII	CATG	4 cut(s)	202, 472, 535, 851
CviQI	GTAC	4 cut(s)	47, 406, 643, 854
DdeI	CTNAG	3 cut(s)	17, 500, 646
DpnI	GATC	4 cut(s)	572, 746, 770, 814
DpnII	GATC	4 cut(s)	570, 744, 768, 812
EaeI	YGGCCR	1 cut(s)	425
Eam1104I	CTCTTC	2 cut(s)	472, 729
EarI	CTCTTC	2 cut(s)	472, 729
EciI	GGCGGA	1 cut(s)	229
Eco105I	TACGTA	1 cut(s)	46
Eco31I	GGTCTC	1 cut(s)	98
Eco47I	GGWCC	1 cut(s)	125
Eco57I	CTGAAG	1 cut(s)	698
Eco72I	CACGTG	1 cut(s)	412
EcoO109I	RGGNCCY	1 cut(s)	125
EcoRII	CCWGG	1 cut(s)	168
FaeI	CATG	4 cut(s)	205, 475, 538, 854
FaqI	GGGAC	5 cut(s)	111, 242, 394, 571, 696
FatI	CATG	4 cut(s)	201, 471, 534, 850
FauI	CCCGC	3 cut(s)	248, 346, 386
FbaI	TGATCA	1 cut(s)	570
FblI	GTMKAC	1 cut(s)	252
Fnu4HI	GCNGC	4 cut(s)	63, 324, 539, 674
FokI	GGATG	1 cut(s)	433
Fsp4HI	GCNGC	4 cut(s)	63, 324, 539, 674
GluI	GCNGC	4 cut(s)	63, 324, 539, 674
HaeIII	GGCC	3 cut(s)	72, 192, 427
HapII	CCGG	3 cut(s)	69, 428, 589
Hin1I	GRCGYC	1 cut(s)	600
Hin1II	CATG	4 cut(s)	205, 475, 538, 854
HincII	GTYRAC	2 cut(s)	469, 598
HindII	GTYRAC	2 cut(s)	469, 598
HindIII	AAGCTT	1 cut(s)	898
HinfI	GANTC	3 cut(s)	281, 684, 911
HpaI	GTTAAC	1 cut(s)	469
HpaII	CCGG	3 cut(s)	69, 428, 589
HphI	GGTGA	1 cut(s)	460
Hpy166II	GTNNAC	3 cut(s)	253, 469, 598
Hpy188I	TCNGA	1 cut(s)	649
Hpy188III	TCNNGA	1 cut(s)	918
Hpy8I	GTNNAC	3 cut(s)	253, 469, 598
Hpy99I	CGWCG	2 cut(s)	200, 550
HpyAV	CCTTC	5 cut(s)	174, 343, 436, 652, 673
HpyCH4IV	ACGT	7 cut(s)	45, 249, 255, 293, 411, 566, 600
HpyCH4V	TGCA	3 cut(s)	556, 562, 634
HpyF10VI	GCNNNNNNNGC	2 cut(s)	332, 906
HpyF3I	CTNAG	3 cut(s)	17, 500, 646
HpySE526I	ACGT	7 cut(s)	45, 249, 255, 293, 411, 566, 600
Hsp92I	GRCGYC	1 cut(s)	600
Hsp92II	CATG	4 cut(s)	205, 475, 538, 854
KflI	GGGWCCC	1 cut(s)	125
Ksp22I	TGATCA	1 cut(s)	570
KspAI	GTTAAC	1 cut(s)	469
Kzo9I	GATC	4 cut(s)	570, 744, 768, 812
LmnI	GCTCC	2 cut(s)	670, 802
Lsp1109I	GCAGC	3 cut(s)	335, 525, 660
MaeII	ACGT	7 cut(s)	45, 249, 255, 293, 411, 566, 600
MalI	GATC	4 cut(s)	572, 746, 770, 814
MboI	GATC	4 cut(s)	570, 744, 768, 812
MboII	GAAGA	5 cut(s)	223, 262, 265, 489, 716
MflI	RGATCY	2 cut(s)	768, 812
MluCI	AATT	3 cut(s)	137, 638, 878
MlyI	GAGTC	3 cut(s)	275, 678, 905
MroXI	GAANNNNTTC	1 cut(s)	626
MseI	TTAA	1 cut(s)	468
MspI	CCGG	3 cut(s)	69, 428, 589
MspR9I	CCNGG	2 cut(s)	170, 589
MvaI	CCWGG	1 cut(s)	170
MwoI	GCNNNNNNNGC	2 cut(s)	332, 906
NciI	CCSGG	1 cut(s)	589
NdeII	GATC	4 cut(s)	570, 744, 768, 812
NlaIII	CATG	4 cut(s)	205, 475, 538, 854
NlaIV	GGNNCC	5 cut(s)	126, 127, 193, 218, 814
NspI	RCATGY	1 cut(s)	854
PdmI	GAANNNNTTC	1 cut(s)	626
Pfl23II	CGTACG	1 cut(s)	46
PflFI	GACNNNGTC	1 cut(s)	266
PkrI	GCNGC	4 cut(s)	64, 325, 540, 675
PleI	GAGTC	3 cut(s)	275, 678, 905
PmaCI	CACGTG	1 cut(s)	412
PmlI	CACGTG	1 cut(s)	412
PpsI	GAGTC	3 cut(s)	275, 678, 905
Ppu21I	YACGTR	2 cut(s)	46, 412
PpuMI	RGGWCCY	1 cut(s)	125
Psp5II	RGGWCCY	1 cut(s)	125
Psp6I	CCWGG	1 cut(s)	168
PspCI	CACGTG	1 cut(s)	412
PspGI	CCWGG	1 cut(s)	168
PspLI	CGTACG	1 cut(s)	46
PspN4I	GGNNCC	5 cut(s)	126, 127, 193, 218, 814
PspPI	GGNCC	2 cut(s)	125, 191
PspPPI	RGGWCCY	1 cut(s)	125
PsuI	RGATCY	2 cut(s)	768, 812
PsyI	GACNNNGTC	1 cut(s)	266
RsaI	GTAC	4 cut(s)	48, 407, 644, 855
RsaNI	GTAC	4 cut(s)	47, 406, 643, 854
SaqAI	TTAA	1 cut(s)	468
SatI	GCNGC	4 cut(s)	63, 324, 539, 674
Sau3AI	GATC	4 cut(s)	570, 744, 768, 812
Sau96I	GGNCC	2 cut(s)	125, 191
SchI	GAGTC	3 cut(s)	275, 678, 905
ScrFI	CCNGG	2 cut(s)	170, 589
SinI	GGWCC	1 cut(s)	125
SmlI	CTYRAG	2 cut(s)	144, 797
SmoI	CTYRAG	2 cut(s)	144, 797
SnaBI	TACGTA	1 cut(s)	46
Sse9I	AATT	3 cut(s)	137, 638, 878
SsiI	CCGC	6 cut(s)	63, 214, 241, 353, 393, 551
StyD4I	CCNGG	2 cut(s)	168, 587
TaiI	ACGT	7 cut(s)	48, 252, 258, 296, 414, 569, 603
TaqI	TCGA	1 cut(s)	96
TasI	AATT	3 cut(s)	137, 638, 878
TatI	WGTACW	1 cut(s)	642
TauI	GCSGC	1 cut(s)	65
Tru1I	TTAA	1 cut(s)	468
Tru9I	TTAA	1 cut(s)	468
TscAI	CASTG	2 cut(s)	215, 376
TseI	GCWGC	3 cut(s)	323, 538, 673
TspGWI	ACGGA	1 cut(s)	319
TspRI	CASTG	2 cut(s)	215, 376
Tth111I	GACNNNGTC	1 cut(s)	266
VpaK11BI	GGWCC	1 cut(s)	125
XapI	RAATTY	1 cut(s)	137
XceI	RCATGY	1 cut(s)	854
XcmI	CCANNNNNNNNNTGG	1 cut(s)	823
XmiI	GTMKAC	1 cut(s)	252
XmnI	GAANNNNTTC	1 cut(s)	626
ZraI	GACGTC	1 cut(s)	601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.