Prupe.1G408500_v2.0.a1

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
35773476 .. 35777442
3967 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G408500.1

Sequence Viewer

Length: 1491 bp
ATGTCGTCGATATACGTATTAGAGCCACCGACGAAGGGCAAGGTGGTGCTGCAAACAACCCATGGGCCGCTCGACGTGGAGCTCTGGCCCAAAGAGGCCCCAAAGGCCGTCAGGAACTTCATTCAGCTCTGCCTCGAAGGCTACTACGACAACACCATATTCCACCGCATTATTAAAGGCTTTCTTGTTCAGGGCGGCGACCCCACCGGCACAGGCACAGGTGGTGAAAGTATTTATGGTGGTGTTTTTGCTGATGAGTTTCATTCGCGTTTGAGATTCAAGCATCGGGGTTTAGTTGCTTGTGCAAATTCTGGTTCACCCAATTCTAATGGGAGCCAGTTTTTTATGAACTTGGACCGCTCTGATTGGCTTGACAAGAAGCATACTATATTTGGGAAGGTGACTGGGGATTCAATATATAATCTTGTGAGGTTGGGTGATATTGAAACTGACAAGGAGGATCGACCCTTGGACCCACCACCAAGGATACTATCAGTAGAGGTGTTATGGAACCCCTTTGATGATATCGTTCCAAGAGTACGTGCAAAGCCATCGACGGAATCCACCAATGACGCTGACAACAAAGACACAAAGAAGAAAGCTGTAAAAAAGCTGAACTTGCTTTCGTTTGGAGAAGAAGCTGAAGAAGAGGAGAAAGAATTGGCAGCTGTAAAGACAAAAATCAAGAGCAGTCATGATGTATTGGATGATCCTCGTCTTCTGAAGGACGAAGTTCCAATTAACGACGTGAACTCTGATGCCAAAACAAGGCATGTACAGTTATCTGTCAGAGAAGCTCTAAGCTCAAAAAAAGATGAGCCCCGGAAAGACTCAGAATCCAACTTTTATAATACCCTCAATTATAGCGATGATGACGATGATGAGGCCAACTTTGATGCACGAATGCGTCAGCAAATACTCAGGAAAAGAAAGGATTTGGGAGATCTCCCACCAAAGTCAAAGATGCATAATGGGAGCTCTAGCCCAAATCAGCGTGAAACACCTGCATCAAGGTCCATTGTTGAAAGCATTAATGATGATCAACAAAAGGTGGAAAAACTATCCTTGAAGAAAAAAGGGATAGGATCAGAGGCAAGAGCTGAACGCATGGCAAATGCTGATGCAGACTTACAGTTGTTGGGTGAAGCTGAAAGAGGAAGACAATTACAGAAACAGAAGAAGCGTAGAAATCAAGGACGAGAAGATGAAGTTCTGGCAAAACTTGAGAAGTTTAAGAAGGGTATACTTGAAAGTCGCACAGCCTCAGTTAGTGAATCTGGAGGTGGCAAAGATGAAGATGCATCTGATTGGAAAGCTGTTCCGTTAAAATTTGCTCCTGAGAGTGGGAAGGATCGCATGTCTCGCAATGAGGACCCAAATGACTACGTTGTGCATGACCCTCTTTTGGAGAAGGGGAAAGAGAAGTTCAACCGGATGCAAGCCAAGCAAAAGCGACGAGAGCGAGAATGGGCTGGCAAATCCCTTACTTGA

Protein Analysis

497

Amino Acids

55.94

Weight (kDa)

7.68

Isoelectric Point (pI)

42.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011445)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 849
AarI CACCTGC 1 cut(s) 1012
Acc36I ACCTGC 1 cut(s) 1012
AccBSI CCGCTC 2 cut(s) 70, 360
AccI GTMKAC 1 cut(s) 1243
AccII CGCG 1 cut(s) 268
AciI CCGC 4 cut(s) 68, 166, 195, 358
AclWI GGATC 4 cut(s) 468, 704, 1093, 1359
AcsI RAATTY 2 cut(s) 307, 1328
AcuI CTGAAG 2 cut(s) 663, 743
AfaI GTAC 2 cut(s) 540, 777
AfiI CCNNNNNNNGG 4 cut(s) 35, 768, 1343, 1405
AgsI TTSAA 7 cut(s) 280, 414, 446, 1025, 1069, 1250, 1429
AjiI CACGTC 2 cut(s) 76, 748
Alw21I GWGCWC 2 cut(s) 84, 980
Alw26I GTCTC 1 cut(s) 1365
AlwI GGATC 4 cut(s) 468, 704, 1093, 1359
AoxI GGCC 5 cut(s) 65, 86, 96, 105, 885
ApeKI GCWGC 2 cut(s) 49, 665
ApoI RAATTY 2 cut(s) 307, 1328
AseI ATTAAT 1 cut(s) 1032
AspS9I GGNCC 7 cut(s) 65, 87, 97, 355, 472, 1014, 1372
AsuC2I CCSGG 1 cut(s) 823
AsuHPI GGTGA 5 cut(s) 236, 309, 412, 449, 1154
AvaII GGWCC 4 cut(s) 355, 472, 1014, 1372
BanII GRGCYC 3 cut(s) 84, 822, 980
BbsI GAAGAC 2 cut(s) 710, 1165
Bbv12I GWGCWC 2 cut(s) 84, 980
BbvI GCAGC 2 cut(s) 36, 677
BccI CCATC 1 cut(s) 559
BceAI ACGGC 1 cut(s) 92
BcgI CGANNNNNNTGC 2 cut(s) 534, 568
BciVI GTATCC 1 cut(s) 480
BclI TGATCA 1 cut(s) 1039
BcnI CCSGG 1 cut(s) 823
BcoDI GTCTC 1 cut(s) 1365
BfaI CTAG 1 cut(s) 981
BfuAI ACCTGC 1 cut(s) 1012
BfuI GTATCC 1 cut(s) 480
BglI GCCNNNNNGGC 2 cut(s) 104, 138
BglII AGATCT 1 cut(s) 943
BisI GCNGC 4 cut(s) 50, 68, 196, 666
BlsI GCNGC 4 cut(s) 51, 69, 197, 667
Bme1390I CCNGG 1 cut(s) 823
Bme18I GGWCC 4 cut(s) 355, 472, 1014, 1372
BmgBI CACGTC 2 cut(s) 76, 748
BmgT120I GGNCC 7 cut(s) 65, 87, 97, 355, 472, 1014, 1372
BmiI GGNNCC 5 cut(s) 99, 335, 474, 512, 1374
BmrFI CCNGG 1 cut(s) 823
BmrI ACTGGG 1 cut(s) 414
BmsI GCATC 9 cut(s) 292, 748, 886, 954, 1016, 1111, 1288, 1310, 1425
BmuI ACTGGG 1 cut(s) 414
BpiI GAAGAC 2 cut(s) 710, 1165
BpmI CTGGAG 1 cut(s) 1299
BpuEI CTTGAG 1 cut(s) 1244
BpuMI CCSGG 1 cut(s) 823
BsaAI YACGTR 2 cut(s) 16, 542
BsaJI CCNNGG 4 cut(s) 61, 468, 482, 821
BsaWI WCCGGW 1 cut(s) 1431
Bsc4I CCNNNNNNNGG 4 cut(s) 35, 768, 1343, 1405
Bse118I RCCGGY 1 cut(s) 206
Bse1I ACTGG 2 cut(s) 337, 409
Bse3DI GCAATG 1 cut(s) 1372
BseDI CCNNGG 4 cut(s) 61, 468, 482, 821
BseGI GGATG 2 cut(s) 712, 1440
BseLI CCNNNNNNNGG 4 cut(s) 35, 768, 1343, 1405
BseMI GCAATG 1 cut(s) 1372
BseMII CTCAG 4 cut(s) 846, 934, 1278, 1329
BseNI ACTGG 2 cut(s) 337, 409
BseRI GAGGAG 1 cut(s) 665
BseXI GCAGC 2 cut(s) 36, 677
Bsh1236I CGCG 1 cut(s) 268
BshFI GGCC 5 cut(s) 67, 88, 98, 107, 887
BsiHKAI GWGCWC 2 cut(s) 84, 980
BsiSI CCGG 3 cut(s) 207, 823, 1432
BslI CCNNNNNNNGG 4 cut(s) 35, 768, 1343, 1405
BsmAI GTCTC 1 cut(s) 1365
BsmI GAATGC 1 cut(s) 909
BsnI GGCC 5 cut(s) 67, 88, 98, 107, 887
Bsp1286I GDGCHC 3 cut(s) 84, 822, 980
Bsp1407I TGTACA 1 cut(s) 775
Bsp143I GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
Bsp19I CCATGG 1 cut(s) 61
BspACI CCGC 4 cut(s) 68, 166, 195, 358
BspANI GGCC 5 cut(s) 67, 88, 98, 107, 887
BspCNI CTCAG 4 cut(s) 845, 933, 1277, 1330
BspFNI CGCG 1 cut(s) 268
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 5 cut(s) 99, 335, 474, 512, 1374
BspMI ACCTGC 1 cut(s) 1012
BspPI GGATC 4 cut(s) 468, 704, 1093, 1359
BsrBI CCGCTC 2 cut(s) 70, 360
BsrDI GCAATG 1 cut(s) 1372
BsrFI RCCGGY 1 cut(s) 206
BsrGI TGTACA 1 cut(s) 775
BsrI ACTGG 2 cut(s) 337, 409
BssAI RCCGGY 1 cut(s) 206
BssECI CCNNGG 4 cut(s) 61, 468, 482, 821
BssMI GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
BssNAI GTATAC 1 cut(s) 1244
BssT1I CCWWGG 3 cut(s) 61, 468, 482
Bst1107I GTATAC 1 cut(s) 1244
Bst4CI ACNGT 2 cut(s) 780, 1134
Bst6I CTCTTC 1 cut(s) 642
BstAUI TGTACA 1 cut(s) 775
BstBAI YACGTR 2 cut(s) 16, 542
BstC8I GCNNGC 2 cut(s) 1440, 1474
BstDEI CTNAG 5 cut(s) 800, 832, 920, 1264, 1338
BstDSI CCRYGG 1 cut(s) 61
BstF5I GGATG 2 cut(s) 712, 1440
BstFNI CGCG 1 cut(s) 268
BstKTI GATC 6 cut(s) 463, 712, 946, 1042, 1088, 1354
BstMAI GTCTC 1 cut(s) 1365
BstMBI GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
BstMWI GCNNNNNNNGC 6 cut(s) 104, 138, 619, 1362, 1444, 1459
BstNSI RCATGY 2 cut(s) 776, 1360
BstSCI CCNGG 1 cut(s) 821
BstSNI TACGTA 1 cut(s) 16
BstUI CGCG 1 cut(s) 268
BstV1I GCAGC 2 cut(s) 36, 677
BstV2I GAAGAC 2 cut(s) 710, 1165
BstX2I RGATCY 1 cut(s) 943
BstYI RGATCY 1 cut(s) 943
BstZ17I GTATAC 1 cut(s) 1244
BsuI GTATCC 1 cut(s) 480
BsuRI GGCC 5 cut(s) 67, 88, 98, 107, 887
BtgI CCRYGG 1 cut(s) 61
BtgZI GCGATG 1 cut(s) 882
BtrI CACGTC 2 cut(s) 76, 748
BtsCI GGATG 2 cut(s) 712, 1440
BveI ACCTGC 1 cut(s) 1012
Cac8I GCNNGC 2 cut(s) 1440, 1474
CciI TCATGA 1 cut(s) 694
Cfr10I RCCGGY 1 cut(s) 206
Cfr13I GGNCC 7 cut(s) 65, 87, 97, 355, 472, 1014, 1372
CseI GACGC 2 cut(s) 581, 896
Csp6I GTAC 2 cut(s) 539, 776
CviAII CATG 6 cut(s) 62, 695, 773, 1108, 1357, 1394
CviQI GTAC 2 cut(s) 539, 776
DdeI CTNAG 5 cut(s) 800, 832, 920, 1264, 1338
DpnI GATC 6 cut(s) 462, 711, 945, 1041, 1087, 1353
DpnII GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
Eam1104I CTCTTC 1 cut(s) 642
EarI CTCTTC 1 cut(s) 642
Ecl136II GAGCTC 2 cut(s) 82, 978
Eco105I TACGTA 1 cut(s) 16
Eco130I CCWWGG 3 cut(s) 61, 468, 482
Eco24I GRGCYC 3 cut(s) 84, 822, 980
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 4 cut(s) 355, 472, 1014, 1372
Eco53kI GAGCTC 2 cut(s) 82, 978
Eco57I CTGAAG 2 cut(s) 663, 743
EcoICRI GAGCTC 2 cut(s) 82, 978
EcoO109I RGGNCCY 2 cut(s) 97, 1372
EcoRV GATATC 1 cut(s) 526
EcoT14I CCWWGG 3 cut(s) 61, 468, 482
EcoT22I ATGCAT 2 cut(s) 969, 1303
EcoT38I GRGCYC 3 cut(s) 84, 822, 980
ErhI CCWWGG 3 cut(s) 61, 468, 482
FaeI CATG 6 cut(s) 65, 698, 776, 1111, 1360, 1397
FalI AAGNNNNNCTT 4 cut(s) 168, 200, 602, 634
FatI CATG 6 cut(s) 61, 694, 772, 1107, 1356, 1393
FbaI TGATCA 1 cut(s) 1039
FblI GTMKAC 1 cut(s) 1243
Fnu4HI GCNGC 4 cut(s) 50, 68, 196, 666
FokI GGATG 2 cut(s) 719, 1447
FriOI GRGCYC 3 cut(s) 84, 822, 980
Fsp4HI GCNGC 4 cut(s) 50, 68, 196, 666
FspBI CTAG 1 cut(s) 981
GluI GCNGC 4 cut(s) 50, 68, 196, 666
GsuI CTGGAG 1 cut(s) 1299
HaeIII GGCC 5 cut(s) 67, 88, 98, 107, 887
HapII CCGG 3 cut(s) 207, 823, 1432
HgaI GACGC 2 cut(s) 581, 896
Hin1II CATG 6 cut(s) 65, 698, 776, 1111, 1360, 1397
HinfI GANTC 6 cut(s) 276, 410, 560, 830, 836, 1274
HpaII CCGG 3 cut(s) 207, 823, 1432
HphI GGTGA 5 cut(s) 236, 309, 412, 449, 1154
Hpy166II GTNNAC 3 cut(s) 317, 751, 1244
Hpy188I TCNGA 7 cut(s) 364, 723, 757, 791, 835, 1090, 1306
Hpy188III TCNNGA 6 cut(s) 112, 685, 695, 922, 1278, 1337
Hpy8I GTNNAC 3 cut(s) 317, 751, 1244
Hpy99I CGWCG 6 cut(s) 10, 34, 77, 559, 749, 1458
HpyAV CCTTC 7 cut(s) 28, 131, 391, 718, 1231, 1342, 1405
HpyCH4III ACNGT 2 cut(s) 780, 1134
HpyCH4IV ACGT 5 cut(s) 15, 75, 541, 747, 1386
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 138, 619, 1362, 1444, 1459
HpyF3I CTNAG 5 cut(s) 800, 832, 920, 1264, 1338
HpySE526I ACGT 5 cut(s) 15, 75, 541, 747, 1386
Hsp92II CATG 6 cut(s) 65, 698, 776, 1111, 1360, 1397
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
LmnI GCTCC 4 cut(s) 79, 333, 975, 1339
Lsp1109I GCAGC 2 cut(s) 36, 677
LweI GCATC 9 cut(s) 292, 748, 886, 954, 1016, 1111, 1288, 1310, 1425
MaeI CTAG 1 cut(s) 981
MaeII ACGT 5 cut(s) 15, 75, 541, 747, 1386
MaeIII GTNAC 1 cut(s) 400
MalI GATC 6 cut(s) 462, 711, 945, 1041, 1087, 1353
MbiI CCGCTC 2 cut(s) 70, 360
MboI GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 3 cut(s) 84, 822, 980
MluCI AATT 7 cut(s) 307, 322, 659, 738, 859, 1163, 1328
MlyI GAGTC 1 cut(s) 824
MmeI TCCRAC 1 cut(s) 864
Mph1103I ATGCAT 2 cut(s) 969, 1303
MseI TTAA 5 cut(s) 174, 741, 1032, 1233, 1325
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 3 cut(s) 207, 823, 1432
MspR9I CCNGG 1 cut(s) 823
Mva1269I GAATGC 1 cut(s) 909
MvnI CGCG 1 cut(s) 268
MwoI GCNNNNNNNGC 6 cut(s) 104, 138, 619, 1362, 1444, 1459
NciI CCSGG 1 cut(s) 823
NcoI CCATGG 1 cut(s) 61
NdeII GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
NlaIII CATG 6 cut(s) 65, 698, 776, 1111, 1360, 1397
NlaIV GGNNCC 5 cut(s) 99, 335, 474, 512, 1374
NmuCI GTSAC 1 cut(s) 400
NsiI ATGCAT 2 cut(s) 969, 1303
NspI RCATGY 2 cut(s) 776, 1360
PagI TCATGA 1 cut(s) 694
PaqCI CACCTGC 1 cut(s) 1012
PctI GAATGC 1 cut(s) 909
PfeI GAWTC 5 cut(s) 276, 410, 560, 836, 1274
PkrI GCNGC 4 cut(s) 51, 69, 197, 667
PleI GAGTC 1 cut(s) 824
PpsI GAGTC 1 cut(s) 824
Ppu21I YACGTR 2 cut(s) 16, 542
PpuMI RGGWCCY 1 cut(s) 1372
PshBI ATTAAT 1 cut(s) 1032
PsiI TTATAA 1 cut(s) 849
Psp124BI GAGCTC 2 cut(s) 84, 980
Psp5II RGGWCCY 1 cut(s) 1372
PspN4I GGNNCC 5 cut(s) 99, 335, 474, 512, 1374
PspPI GGNCC 7 cut(s) 65, 87, 97, 355, 472, 1014, 1372
PspPPI RGGWCCY 1 cut(s) 1372
PsuI RGATCY 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 2 cut(s) 540, 777
RsaNI GTAC 2 cut(s) 539, 776
SacI GAGCTC 2 cut(s) 84, 980
SaqAI TTAA 5 cut(s) 174, 741, 1032, 1233, 1325
SatI GCNGC 4 cut(s) 50, 68, 196, 666
Sau3AI GATC 6 cut(s) 460, 709, 943, 1039, 1085, 1351
Sau96I GGNCC 7 cut(s) 65, 87, 97, 355, 472, 1014, 1372
SchI GAGTC 1 cut(s) 824
ScrFI CCNGG 1 cut(s) 823
SduI GDGCHC 3 cut(s) 84, 822, 980
SfaNI GCATC 9 cut(s) 292, 748, 886, 954, 1016, 1111, 1288, 1310, 1425
SfiI GGCCNNNNNGGCC 1 cut(s) 104
SinI GGWCC 4 cut(s) 355, 472, 1014, 1372
SmlI CTYRAG 1 cut(s) 1223
SmoI CTYRAG 1 cut(s) 1223
SnaBI TACGTA 1 cut(s) 16
Sse9I AATT 7 cut(s) 307, 322, 659, 738, 859, 1163, 1328
SsiI CCGC 4 cut(s) 68, 166, 195, 358
SspMI CTAG 1 cut(s) 981
SstI GAGCTC 2 cut(s) 84, 980
StyD4I CCNGG 1 cut(s) 821
StyI CCWWGG 3 cut(s) 61, 468, 482
TaaI ACNGT 2 cut(s) 780, 1134
TaiI ACGT 5 cut(s) 18, 78, 544, 750, 1389
TaqI TCGA 5 cut(s) 8, 72, 135, 463, 554
TasI AATT 7 cut(s) 307, 322, 659, 738, 859, 1163, 1328
TatI WGTACW 1 cut(s) 775
TauI GCSGC 2 cut(s) 70, 198
TfiI GAWTC 5 cut(s) 276, 410, 560, 836, 1274
Tru1I TTAA 5 cut(s) 174, 741, 1032, 1233, 1325
Tru9I TTAA 5 cut(s) 174, 741, 1032, 1233, 1325
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 2 cut(s) 49, 665
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 5 cut(s) 109, 251, 362, 1221, 1308
TspGWI ACGGA 2 cut(s) 572, 1311
VpaK11BI GGWCC 4 cut(s) 355, 472, 1014, 1372
VspI ATTAAT 1 cut(s) 1032
XapI RAATTY 2 cut(s) 307, 1328
XceI RCATGY 2 cut(s) 776, 1360
XmiI GTMKAC 1 cut(s) 1243
XspI CTAG 1 cut(s) 981
Zsp2I ATGCAT 2 cut(s) 969, 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.