Rh6CG518400

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
67531017 .. 67535131
4115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG518400.1

Sequence Viewer

Length: 1488 bp
ATGTCGTCGATATACGTCTTAGAACCACCGACTAGGGGCAAGGTGGTGCTGCAAACGACCCATGGGCCTCTCGACATCGAGCTCTGGCCCAAAGAGGCCCCCAAGGCCGCCCGCAACTTCGTCCAGCTCTGCCTCGAAGGCTACTACAACAACACCATCTTCCACCGCATCATCAAAGGCTTTCTCGTTCAGGGCGGCGACCCCACCGCCACCGGCGAAGGCGGCGAGAGTATTTACGGCGGTCTTTTCTCCGACGAGTTTCACTCGCGGCTGAGATTCAAGCATAGAGGTTTAGTTGCTTGTGCAAATGCCAATAAGCCTAATACGAATGGGAGCCAGTTCTTCATGAACTTGGACCGGTGCGATTGGCTTGACAAGAAGCACACGATTTTCGGAAAGGTGACTGGTGATTCCATATACAATCTAGTGAGGTTGGGTGAGATTGAAACCGACAAGGAGGACCGGCCTTTGGACCCGCCACCGAGGATATTATCAGTAGAGGTACTGTGGAATCCCTTTGATGATATTGTCCCAAGAGTGCTTTCACGTTCTTTGGTCCAGTCCACAGATGATACTGACAACAAGGATACAAAGAAGAAAGCTGTGAAAAAGCTGAACTTGCTGTCGTTTGGAGAAGAAGCTGAAGAGGAGGAGAGAGAATTGGCAACTGTAAAGACAAAAATAAAGAGCAGTCATGATCTATTGGATGATCCTCGTCTTTTGAAGGAAGAAGTTCCAATTAACGAAGTGGATCCCAAAACAAGGCAGATGCAGTTATCTGTCAGAGAAGCTCTACAGTCAAAGAAAGAAGACCCCTCAAAAGACTCCGAATCAAAATTTTATAATTCTCTTAATTACAGTGATAATGATGATGATGATGATAATGAGTCCAATTTTGATGCACGAATGCGTCATCAAATACTCAGGAAACGGAAAGAGTTGGGAGATCTCCCACCAAAGCCAAAGTTGCCGAATGGGAGCTCTAGCCCAAAGCAGCGTGAAACATCTACAACAAGGTCCAAGGCTGAAAGCATTGATGATGACCAACCAAGGGTAGAAAAGCTGTCATTGAAGAAAAAAGGGATAGGATCAGAGGCCAAAGCTGAGCGCCTGGCCAATGCTGATACAGACTTACAGCTGTTGAGTGAAGCTGAAAGAGGAAGACAATTGCAGAAACAGAAGAAGCGTAGAAACCAAGGACGAGAAGAAGAAACAATAGCAAGACTTGAGAAGTTTAAGAAGACCCTGTGTGTGAAGCCCACAGCCCCAGATAGTGAATCTGGAGGTGGCGATGGTGAAGATTTATCTGATTGGCAAACATCTCGGTTAAAATTTGCTCCTGAGACTGGCAAGATGACTCGCACCGAGGACATAAATGATTACGTTGTGCTTGACCCTCTTTTGGAGAAGGGGAAAGAGAAGTTCAACCGGATGCAAGCAAAGCAAAAACGAAGAGAGCGAGAATGGGCCGGCAAATCTCTTACTTGA

Protein Analysis

495

Amino Acids

56.33

Weight (kDa)

7.08

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 15 - 168 3.7e-46 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011445)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 843
AccII CGCG 1 cut(s) 268
AciI CCGC 9 cut(s) 108, 112, 166, 195, 207, 222, 240, 268, 476
AclWI GGATC 4 cut(s) 704, 746, 759, 1096
AcoI YGGCCR 1 cut(s) 1113
AcsI RAATTY 2 cut(s) 836, 1331
AcuI CTGAAG 1 cut(s) 663
AfaI GTAC 1 cut(s) 504
AfiI CCNNNNNNNGG 6 cut(s) 35, 469, 762, 1051, 1346, 1402
AgeI ACCGGT 1 cut(s) 357
AgsI TTSAA 5 cut(s) 280, 446, 724, 1072, 1426
AjnI CCWGG 1 cut(s) 1110
AjuI GAANNNNNNNTTGG 2 cut(s) 526, 558
Alw21I GWGCWC 2 cut(s) 84, 983
Alw26I GTCTC 1 cut(s) 1337
AlwI GGATC 4 cut(s) 704, 746, 759, 1096
AoxI GGCC 8 cut(s) 65, 86, 96, 105, 464, 1095, 1113, 1467
ApeKI GCWGC 2 cut(s) 49, 994
ApoI RAATTY 2 cut(s) 836, 1331
AsiGI ACCGGT 1 cut(s) 357
Asp700I GAANNNNTTC 1 cut(s) 732
AspLEI GCGC 1 cut(s) 1110
AspS9I GGNCC 9 cut(s) 65, 87, 97, 355, 460, 472, 556, 1017, 1467
AsuHPI GGTGA 4 cut(s) 412, 419, 449, 1307
AvaII GGWCC 5 cut(s) 355, 460, 472, 556, 1017
BalI TGGCCA 1 cut(s) 1115
BamHI GGATCC 1 cut(s) 751
BanII GRGCYC 2 cut(s) 84, 983
BbsI GAAGAC 3 cut(s) 816, 1168, 1247
Bbv12I GWGCWC 2 cut(s) 84, 983
BbvI GCAGC 2 cut(s) 36, 1006
BccI CCATC 2 cut(s) 164, 1286
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 1 cut(s) 1112
BciVI GTATCC 1 cut(s) 580
BcoDI GTCTC 1 cut(s) 1337
BfaI CTAG 3 cut(s) 33, 425, 984
BfmI CTRYAG 1 cut(s) 794
BfoI RGCGCY 1 cut(s) 1111
BfuI GTATCC 1 cut(s) 580
BglI GCCNNNNNGGC 2 cut(s) 104, 138
BglII AGATCT 1 cut(s) 946
BisI GCNGC 6 cut(s) 50, 108, 196, 223, 269, 995
BlpI GCTNAGC 1 cut(s) 1104
BlsI GCNGC 6 cut(s) 51, 109, 197, 224, 270, 996
Bme1390I CCNGG 1 cut(s) 1112
Bme18I GGWCC 5 cut(s) 355, 460, 472, 556, 1017
BmgT120I GGNCC 9 cut(s) 65, 87, 97, 355, 460, 472, 556, 1017, 1467
BmiI GGNNCC 4 cut(s) 99, 335, 474, 753
BmrFI CCNGG 1 cut(s) 1112
BmsI GCATC 4 cut(s) 177, 759, 889, 1422
BpiI GAAGAC 3 cut(s) 816, 1168, 1247
BplI GAGNNNNNCTC 2 cut(s) 248, 280
BpmI CTGGAG 1 cut(s) 1302
Bpu1102I GCTNAGC 1 cut(s) 1104
BpuEI CTTGAG 1 cut(s) 1247
BsaJI CCNNGG 7 cut(s) 61, 102, 482, 1020, 1049, 1195, 1365
BsaWI WCCGGW 2 cut(s) 357, 1428
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 469, 762, 1051, 1346, 1402
Bse118I RCCGGY 4 cut(s) 212, 357, 462, 1469
Bse1I ACTGG 4 cut(s) 337, 409, 559, 1351
BseBI CCWGG 1 cut(s) 1112
BseDI CCNNGG 7 cut(s) 61, 102, 482, 1020, 1049, 1195, 1365
BseGI GGATG 2 cut(s) 712, 1437
BseLI CCNNNNNNNGG 6 cut(s) 35, 469, 762, 1051, 1346, 1402
BseMII CTCAG 4 cut(s) 263, 937, 1095, 1332
BseNI ACTGG 4 cut(s) 337, 409, 559, 1351
BseRI GAGGAG 2 cut(s) 662, 665
BseXI GCAGC 2 cut(s) 36, 1006
Bsh1236I CGCG 1 cut(s) 268
BshFI GGCC 8 cut(s) 67, 88, 98, 107, 466, 1097, 1115, 1469
BshTI ACCGGT 1 cut(s) 357
BsiHKAI GWGCWC 2 cut(s) 84, 983
BsiSI CCGG 5 cut(s) 213, 358, 463, 1429, 1470
BslFI GGGAC 1 cut(s) 515
BslI CCNNNNNNNGG 6 cut(s) 35, 469, 762, 1051, 1346, 1402
BsmAI GTCTC 1 cut(s) 1337
BsmFI GGGAC 1 cut(s) 515
BsmI GAATGC 1 cut(s) 912
BsnI GGCC 8 cut(s) 67, 88, 98, 107, 466, 1097, 1115, 1469
Bsp1286I GDGCHC 2 cut(s) 84, 983
Bsp143I GATC 5 cut(s) 697, 709, 751, 946, 1088
Bsp1720I GCTNAGC 1 cut(s) 1104
Bsp19I CCATGG 1 cut(s) 61
BspACI CCGC 9 cut(s) 108, 112, 166, 195, 207, 222, 240, 268, 476
BspANI GGCC 8 cut(s) 67, 88, 98, 107, 466, 1097, 1115, 1469
BspCNI CTCAG 4 cut(s) 264, 936, 1096, 1333
BspFNI CGCG 1 cut(s) 268
BspHI TCATGA 2 cut(s) 345, 694
BspLI GGNNCC 4 cut(s) 99, 335, 474, 753
BspPI GGATC 4 cut(s) 704, 746, 759, 1096
BsrFI RCCGGY 4 cut(s) 212, 357, 462, 1469
BsrI ACTGG 4 cut(s) 337, 409, 559, 1351
BssAI RCCGGY 4 cut(s) 212, 357, 462, 1469
BssECI CCNNGG 7 cut(s) 61, 102, 482, 1020, 1049, 1195, 1365
BssMI GATC 5 cut(s) 697, 709, 751, 946, 1088
BssT1I CCWWGG 5 cut(s) 61, 102, 1020, 1049, 1195
Bst2UI CCWGG 1 cut(s) 1112
Bst4CI ACNGT 4 cut(s) 507, 670, 798, 860
Bst6I CTCTTC 2 cut(s) 639, 1447
BstC8I GCNNGC 3 cut(s) 112, 1437, 1471
BstDEI CTNAG 5 cut(s) 19, 272, 923, 1104, 1341
BstDSI CCRYGG 1 cut(s) 61
BstF5I GGATG 2 cut(s) 712, 1437
BstFNI CGCG 1 cut(s) 268
BstH2I RGCGCY 1 cut(s) 1111
BstHHI GCGC 1 cut(s) 1110
BstKTI GATC 5 cut(s) 700, 712, 754, 949, 1091
BstMAI GTCTC 1 cut(s) 1337
BstMBI GATC 5 cut(s) 697, 709, 751, 946, 1088
BstMWI GCNNNNNNNGC 6 cut(s) 104, 138, 222, 619, 967, 1441
BstNI CCWGG 1 cut(s) 1112
BstSCI CCNGG 1 cut(s) 1110
BstSFI CTRYAG 1 cut(s) 794
BstUI CGCG 1 cut(s) 268
BstV1I GCAGC 2 cut(s) 36, 1006
BstV2I GAAGAC 3 cut(s) 816, 1168, 1247
BstX2I RGATCY 2 cut(s) 751, 946
BstYI RGATCY 2 cut(s) 751, 946
BsuI GTATCC 1 cut(s) 580
BsuRI GGCC 8 cut(s) 67, 88, 98, 107, 466, 1097, 1115, 1469
BtgI CCRYGG 1 cut(s) 61
BtgZI GCGATG 1 cut(s) 1305
BtsCI GGATG 2 cut(s) 712, 1437
BtsIMutI CAGTG 1 cut(s) 865
Cac8I GCNNGC 3 cut(s) 112, 1437, 1471
CciI TCATGA 2 cut(s) 345, 694
CfoI GCGC 1 cut(s) 1110
Cfr10I RCCGGY 4 cut(s) 212, 357, 462, 1469
Cfr13I GGNCC 9 cut(s) 65, 87, 97, 355, 460, 472, 556, 1017, 1467
CseI GACGC 1 cut(s) 899
Csp6I GTAC 1 cut(s) 503
CspAI ACCGGT 1 cut(s) 357
CviAII CATG 3 cut(s) 62, 346, 695
CviQI GTAC 1 cut(s) 503
DdeI CTNAG 5 cut(s) 19, 272, 923, 1104, 1341
DpnI GATC 5 cut(s) 699, 711, 753, 948, 1090
DpnII GATC 5 cut(s) 697, 709, 751, 946, 1088
EaeI YGGCCR 1 cut(s) 1113
Eam1104I CTCTTC 2 cut(s) 639, 1447
EarI CTCTTC 2 cut(s) 639, 1447
Ecl136II GAGCTC 2 cut(s) 82, 981
Eco130I CCWWGG 5 cut(s) 61, 102, 1020, 1049, 1195
Eco24I GRGCYC 2 cut(s) 84, 983
Eco47I GGWCC 5 cut(s) 355, 460, 472, 556, 1017
Eco53kI GAGCTC 2 cut(s) 82, 981
Eco57I CTGAAG 1 cut(s) 663
EcoICRI GAGCTC 2 cut(s) 82, 981
EcoO109I RGGNCCY 1 cut(s) 97
EcoRII CCWGG 1 cut(s) 1110
EcoT14I CCWWGG 5 cut(s) 61, 102, 1020, 1049, 1195
EcoT38I GRGCYC 2 cut(s) 84, 983
ErhI CCWWGG 5 cut(s) 61, 102, 1020, 1049, 1195
FaeI CATG 3 cut(s) 65, 349, 698
FaiI YATR 9 cut(s) 13, 63, 285, 347, 416, 418, 696, 843, 1373
FalI AAGNNNNNCTT 2 cut(s) 602, 634
FaqI GGGAC 1 cut(s) 515
FatI CATG 3 cut(s) 61, 345, 694
FauI CCCGC 2 cut(s) 119, 483
Fnu4HI GCNGC 6 cut(s) 50, 108, 196, 223, 269, 995
FokI GGATG 2 cut(s) 719, 1444
FriOI GRGCYC 2 cut(s) 84, 983
Fsp4HI GCNGC 6 cut(s) 50, 108, 196, 223, 269, 995
FspBI CTAG 3 cut(s) 33, 425, 984
GlaI GCGC 1 cut(s) 1109
GluI GCNGC 6 cut(s) 50, 108, 196, 223, 269, 995
GsuI CTGGAG 1 cut(s) 1302
HaeII RGCGCY 1 cut(s) 1111
HaeIII GGCC 8 cut(s) 67, 88, 98, 107, 466, 1097, 1115, 1469
HapII CCGG 5 cut(s) 213, 358, 463, 1429, 1470
HgaI GACGC 1 cut(s) 899
HhaI GCGC 1 cut(s) 1110
Hin1II CATG 3 cut(s) 65, 349, 698
Hin6I GCGC 1 cut(s) 1108
HinP1I GCGC 1 cut(s) 1108
HinfI GANTC 8 cut(s) 276, 410, 511, 824, 830, 887, 1277, 1357
HpaII CCGG 5 cut(s) 213, 358, 463, 1429, 1470
HphI GGTGA 4 cut(s) 412, 419, 449, 1307
Hpy166II GTNNAC 1 cut(s) 564
Hpy188I TCNGA 6 cut(s) 253, 395, 785, 829, 1093, 1309
Hpy188III TCNNGA 6 cut(s) 71, 346, 695, 925, 1281, 1340
Hpy8I GTNNAC 1 cut(s) 564
Hpy99I CGWCG 2 cut(s) 10, 257
HpyAV CCTTC 4 cut(s) 131, 212, 718, 1402
HpyCH4III ACNGT 4 cut(s) 507, 670, 798, 860
HpyCH4IV ACGT 3 cut(s) 15, 547, 1383
HpyCH4V TGCA 6 cut(s) 52, 305, 772, 902, 1171, 1435
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 138, 222, 619, 967, 1441
HpyF3I CTNAG 5 cut(s) 19, 272, 923, 1104, 1341
HpySE526I ACGT 3 cut(s) 15, 547, 1383
Hsp92II CATG 3 cut(s) 65, 349, 698
HspAI GCGC 1 cut(s) 1108
KroI GCCGGC 1 cut(s) 1469
KroNI GCCGGC 1 cut(s) 1471
Kzo9I GATC 5 cut(s) 697, 709, 751, 946, 1088
LmnI GCTCC 3 cut(s) 333, 978, 1342
Lsp1109I GCAGC 2 cut(s) 36, 1006
LweI GCATC 4 cut(s) 177, 759, 889, 1422
MaeI CTAG 3 cut(s) 33, 425, 984
MaeII ACGT 3 cut(s) 15, 547, 1383
MaeIII GTNAC 1 cut(s) 400
MalI GATC 5 cut(s) 699, 711, 753, 948, 1090
MboI GATC 5 cut(s) 697, 709, 751, 946, 1088
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 2 cut(s) 751, 946
MhlI GDGCHC 2 cut(s) 84, 983
MlsI TGGCCA 1 cut(s) 1115
MluCI AATT 8 cut(s) 659, 738, 836, 844, 853, 892, 1166, 1331
MluNI TGGCCA 1 cut(s) 1115
MlyI GAGTC 3 cut(s) 818, 896, 1351
MmeI TCCRAC 1 cut(s) 276
Mox20I TGGCCA 1 cut(s) 1115
MroNI GCCGGC 1 cut(s) 1469
MroXI GAANNNNTTC 1 cut(s) 732
MscI TGGCCA 1 cut(s) 1115
MseI TTAA 4 cut(s) 741, 852, 1236, 1328
Msp20I TGGCCA 1 cut(s) 1115
MspA1I CMGCKG 1 cut(s) 1138
MspI CCGG 5 cut(s) 213, 358, 463, 1429, 1470
MspR9I CCNGG 1 cut(s) 1112
MunI CAATTG 1 cut(s) 1166
Mva1269I GAATGC 1 cut(s) 912
MvaI CCWGG 1 cut(s) 1112
MvnI CGCG 1 cut(s) 268
MwoI GCNNNNNNNGC 6 cut(s) 104, 138, 222, 619, 967, 1441
NaeI GCCGGC 1 cut(s) 1471
NcoI CCATGG 1 cut(s) 61
NdeII GATC 5 cut(s) 697, 709, 751, 946, 1088
NgoMIV GCCGGC 1 cut(s) 1469
NlaIII CATG 3 cut(s) 65, 349, 698
NlaIV GGNNCC 4 cut(s) 99, 335, 474, 753
NmuCI GTSAC 1 cut(s) 400
PagI TCATGA 2 cut(s) 345, 694
PcsI WCGNNNNNNNCGW 1 cut(s) 1456
PctI GAATGC 1 cut(s) 912
PdiI GCCGGC 1 cut(s) 1471
PdmI GAANNNNTTC 1 cut(s) 732
PfeI GAWTC 5 cut(s) 276, 410, 511, 830, 1277
PinAI ACCGGT 1 cut(s) 357
PkrI GCNGC 6 cut(s) 51, 109, 197, 224, 270, 996
PleI GAGTC 3 cut(s) 818, 895, 1351
PpsI GAGTC 3 cut(s) 818, 895, 1351
PsiI TTATAA 1 cut(s) 843
Psp124BI GAGCTC 2 cut(s) 84, 983
Psp6I CCWGG 1 cut(s) 1110
PspGI CCWGG 1 cut(s) 1110
PspN4I GGNNCC 4 cut(s) 99, 335, 474, 753
PspPI GGNCC 9 cut(s) 65, 87, 97, 355, 460, 472, 556, 1017, 1467
PsuI RGATCY 2 cut(s) 751, 946
PvuII CAGCTG 1 cut(s) 1138
RsaI GTAC 1 cut(s) 504
RsaNI GTAC 1 cut(s) 503
SacI GAGCTC 2 cut(s) 84, 983
SaqAI TTAA 4 cut(s) 741, 852, 1236, 1328
SatI GCNGC 6 cut(s) 50, 108, 196, 223, 269, 995
Sau3AI GATC 5 cut(s) 697, 709, 751, 946, 1088
Sau96I GGNCC 9 cut(s) 65, 87, 97, 355, 460, 472, 556, 1017, 1467
SchI GAGTC 3 cut(s) 818, 896, 1351
ScrFI CCNGG 1 cut(s) 1112
SduI GDGCHC 2 cut(s) 84, 983
SfaNI GCATC 4 cut(s) 177, 759, 889, 1422
SfcI CTRYAG 1 cut(s) 794
SfiI GGCCNNNNNGGCC 1 cut(s) 104
SgrAI CRCCGGYG 1 cut(s) 212
SinI GGWCC 5 cut(s) 355, 460, 472, 556, 1017
SmlI CTYRAG 1 cut(s) 1226
SmoI CTYRAG 1 cut(s) 1226
Sse9I AATT 8 cut(s) 659, 738, 836, 844, 853, 892, 1166, 1331
SsiI CCGC 9 cut(s) 108, 112, 166, 195, 207, 222, 240, 268, 476
SspMI CTAG 3 cut(s) 33, 425, 984
SstI GAGCTC 2 cut(s) 84, 983
StyD4I CCNGG 1 cut(s) 1110
StyI CCWWGG 5 cut(s) 61, 102, 1020, 1049, 1195
TaaI ACNGT 4 cut(s) 507, 670, 798, 860
TaiI ACGT 3 cut(s) 18, 550, 1386
TaqI TCGA 4 cut(s) 8, 72, 78, 135
TasI AATT 8 cut(s) 659, 738, 836, 844, 853, 892, 1166, 1331
TauI GCSGC 4 cut(s) 110, 198, 225, 271
TfiI GAWTC 5 cut(s) 276, 410, 511, 830, 1277
Tru1I TTAA 4 cut(s) 741, 852, 1236, 1328
Tru9I TTAA 4 cut(s) 741, 852, 1236, 1328
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 2 cut(s) 49, 994
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 2 cut(s) 334, 362
TspGWI ACGGA 1 cut(s) 946
TspRI CASTG 1 cut(s) 865
VpaK11BI GGWCC 5 cut(s) 355, 460, 472, 556, 1017
XapI RAATTY 2 cut(s) 836, 1331
XmnI GAANNNNTTC 1 cut(s) 732
XspI CTAG 3 cut(s) 33, 425, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.