Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009577

Physical Location & Seq

Genomic Coordinates Forward (+)

36313312 .. 36324313

Gene Structure 11002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G419400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3096 bp

ATGGCTAATAACCCTCAGTCCTCAGCTGCGCAGCCATTTCGGCCTCCTCCAGTTGCTTCCTTGGGTCCTCAAAGTTTTGGTTCATCCCCGTCTCTTCAATATCGACCAGTGGTTCCAACACAGCAAGGACAACAGTTTATTCAATCAGCCTCCCAACAGTTTCAGCCTGTGGGACAAGGTATTCCTTCTTCAAATGTTGGGATGCCTGCTAGTCAAAGTCAGCAATTACAATTTTCTCAACCAATGCAACCGTATCCTCTCAGGCCAAGTCAGCCTGGTCATGCTACACCTTCGTCACAGGCTTTGCCTATGCAATACATGCAGACGAGGCCTATTACGTCTGCCCCATCACAGTCTCAGCAACCTGCCCTACCTTTTAATAATCAGATGCCTGGCTTAGCTGGTGGCGGAATGCCTTATTCTTCATCATATATATTCGCACCACCTTCATATGCCCAGCCACAAAATAATGTCAGTTCTTCGTCCCAGTTTCAGCCAATCTCTCAAGTGCAAGCACATGTATCTGTCACAGGACAGCCTTGGGTGTCCTCTGGTAATCAGGGTGCAGCAGTTCCTACACCGGTACCGCAGTCCGGTCAACAACCTTCAAGCACTACTTTCACAGATTCTGCTGTAAATGTTCCTAGCCAAACACAGCAGTCTTCTTCTGATTGGCAAGAGCATACGTCGGGTGATGGAAGAAGATATTATTTCAACAGAAGAACAAAACAATCTAGTTGGGAGAAGCCTTTAGAATTGATGACACCGATGGAGAGAGCCGATGCATCAACTGTTTGGAAGGAATATACGTCTTCAGATGGGAAAAAGTATTATTACAACAAAGTTACAAGGGAATCTAAGTGGACAATTCCAGAGGAGTTAAAGTTGGCTCGTGAACAGGCTCAAAGAGAACTTGCCCAGGGAACACGTTCAGAAATGAATTTGACTTCTCATGCCCCTCCTGCTGTTGCTTCAGCTGAAACACCTATGGGATCTAGTTCAGTTGGCCCCAGCACTTCTTCAGCCCTACCTGGGATGGTATCGAGCCCAGTTGCAGTTATACCTGTGTCTTCCTTTTCTAATCCTTCCCCCATTGCGCCTACTGGATCATCAGTTGCTTCTGGTGCACAGTCTTCCATAACAGGTGGCGTTGGCATTCAGCCTCCTGTGGTGACTGTCACTCCACCGCCTGCTTCTGTTTCAGGGAGTACTGGAGTTCCTCCTACTTTGGTCAACGCCATTACAAAATCAGTGAGTACCTTTGAAAATGTAACATCTCAAGATATTGGAAGTGCAGATGATGGAGCTTTTACTCAAGATATCGAGGAAGCAAAAAGAGGAATGGCAGTTGCTGGAAAAGTCAATGTGACTCCGTCAGAGGAGAAAACAGTTGATGAAGAACCATTGGTGTATGCCAGTAAGCAGGAGGCAAAAAATGCATTTAAAGCACTTCTGGAATCTGCAAATGTTCACTCCGATTGGACTTGGGAGCAGACAATGAGAGAGATCATTAATGACAAAAGATATGGTGCTTTAAAAACTCTAGGTGAGAGGAAGCAAGCATTTAATGAGTACTTGGGTCAAAGGAAAAAACTGGAGAATGAAGAGAGGCGCATGAGGCAGAAAAAAGCTCGGGAAGAATTTTCAAAAATGTTGGAAGAGTCCAAGGAACTTATGTCAGCAACCAGATGGAGCAAAGCTGTCAGTATGTTTGAAAATGATGAACGATTCAAGGCTGTAGAACGAGCGAGGGACCGGGAAGATCTTTATGAGAGCTACATTGTAGAATTGGAGAGGAAGGAAAAAGAAAAGGCGGCTGAAGATCATAAGCAGAATATTGCAGAGTATAGAAAATTCCTGGAATCTTGTGACTTTATCAAGGTGAACAGCCAGTGGCGGAAAGTTCAAGATCGCTTAGAAGATGATGAGAGATGCTTGCGTCTTGAAAAACTTGACAGGTTGCTCATTTTCCAGGACTATATTCGCGACCTTGAGAAGGAAGAAGAGGAGCAAAAGAAGATACAGAAGGAACAATTGAGGCGGGTTGAGAGGAAAAACCGCGATGAGTTTCGAAAGCTGATGGAAGAACATGTTGCCGACGGTACTCTTACAGCTAAAACTTACTGGCGCGATTACTGCATGAAGGTTAAGGACCTGTCTTCGTACGAAGCTGTTGCATCTAATACCTCTGGTTCAACACCAAAAGAACTGTTTGAGGATGTTGCTGAAGAATTAGAGAAACAGTATCATGAAGATAAAGCTCGGATAAAGGATGCAATGAAGTTGGGGAAGGTTACCCTGGCTTCTACACTGACATTTGAAGAATTTAAGGTTGCTATTTTGGAAGATATTGGTTTCCCATCAATATCAGACATTAACTTTAAGCTTGTATATGAGGAATTATTAGAGAGAGCCAAGGAGAAGGAGGAGAAAGAAGCAAAGAAGCGTCAACGACTAGGTGACGACTTCAATAAGCTATTGCACACATTCAAGGAAATAACTGCTTCTTCTAATTGGGAAGATTGCAAACACCTTTTCGAAGAAACCCAAGAATACAGATCAATTGGGGAAGAGAACTTTAGTAGGGAAGTTTTTGAGGAATATATTACAAACTTACAGGAGAAGGCTAAAGAGAAAGAACGCAAGCGAGAGGAGGAAAAGGCTAAAAAAGAGAGAGAGAGAGAGGAGAAAGAGAAGCGTAAGGATAAAGAGAGGAAGGAGAAGGAGAGAGAACGTGAAAAAGAAAAGGGAAAAGAACGGTCTAAGAAGGATGAAACAGATAGTGAAAATGTAGACATAACTGATAGTCATGGTCATAAAGAAGATAAGAAAAGGGAGAAAGACAAAGATAGAAAGCACCGGAAGCGGCATCAAAGTTCCATGGATGATGTAGGTTCTGATAAGGAGGAGAAAGAAGAGTCTAAGAAACGCAGACATAGTAGTGACCGCAAAAGATCAAGAAAACATACACCTGAATCTGACAGTGAAAGTCGGCATAGAAGACACAAGAGAGAGCATCAGGATGGTTCCCGTCGAAATGGTGGATATGGGGAACTTGAAGATGGGGAGGTTGGTGAAGATGGGGAAATTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005685 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006928 GO:0006996 GO:0007010 GO:0008150 GO:0008152 GO:0008360 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0016477 GO:0016592 GO:0016604 GO:0016607 GO:0022603 GO:0022604 GO:0030532 GO:0031974 GO:0031981 GO:0032465 GO:0032991 GO:0034399 GO:0034641 GO:0040011 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051302 GO:0051674 GO:0051726 GO:0065007 GO:0065008 GO:0070013 GO:0070064 GO:0071004 GO:0071010 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

FF WW

Protein Analysis

1032

Amino Acids

117.2

Weight (kDa)

6.29

Isoelectric Point (pI)

61.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44910 AT1G44910
fragaria_vesca	FvH4_2g32680 FvH4_2g32680 FvH4_2g32680 FvH4_2g32680
malus_domestica	MD08G1078500.v1.1 MD15G1065300.v1.1
prunus_persica	Prupe.1G419400_v2.0.a1
pyrus_communis	pycom08g06490 pycom15g06180
rosa_chinensis	RchiOBHm_Chr6g0309991
rosa_laevigata	RLG00000010518
rosa_multiflora	Rmu_sc0000294.1_g000011
rosa_roxburghii	Rroxscaffold_7G00158970
rosa_rugosa	Rorug06G0376700 Rorug06G0376800
rosa_samantha	Rh6AG490400 Rh6BG499900 Rh6CG504800 Rh6DG490800
rosa_wichuraiana	Rw6G042690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	30
Acc36I	ACCTGC	1 cut(s)	373
Acc65I	GGTACC	1 cut(s)	583
AccB1I	GGYRCC	1 cut(s)	583
AccI	GTMKAC	1 cut(s)	2793
AccII	CGCG	3 cut(s)	1986, 2061, 2130
AciI	CCGC	9 cut(s)	408, 587, 1187, 1814, 1897, 2041, 2059, 2866, 2947
AclWI	GGATC	2 cut(s)	1000, 1114
AcsI	RAATTY	5 cut(s)	940, 1640, 1853, 2324, 3087
AcuI	CTGAAG	5 cut(s)	798, 957, 1005, 1839, 2247
AfaI	GTAC	6 cut(s)	585, 1210, 1258, 1574, 2104, 2165
AfiI	CCNNNNNNNGG	3 cut(s)	593, 1032, 1996
AflIII	ACRYGT	3 cut(s)	517, 926, 2089
AgeI	ACCGGT	1 cut(s)	580
AjnI	CCWGG	7 cut(s)	274, 391, 918, 1030, 1857, 1971, 2298
Alw21I	GWGCWC	1 cut(s)	1129
Alw26I	GTCTC	2 cut(s)	96, 360
Alw44I	GTGCAC	1 cut(s)	1125
AlwI	GGATC	2 cut(s)	1000, 1114
AlwNI	CAGNNNCTG	2 cut(s)	629, 1352
Ama87I	CYCGRG	1 cut(s)	1632
AoxI	GGCC	4 cut(s)	41, 263, 329, 1006
ApaLI	GTGCAC	1 cut(s)	1125
ApeKI	GCWGC	3 cut(s)	26, 31, 566
ApoI	RAATTY	5 cut(s)	940, 1640, 1853, 2324, 3087
AseI	ATTAAT	1 cut(s)	1512
AsiGI	ACCGGT	1 cut(s)	580
Asp700I	GAANNNNTTC	1 cut(s)	928
Asp718I	GGTACC	1 cut(s)	583
AspLEI	GCGC	4 cut(s)	31, 1099, 1614, 2130
AspS9I	GGNCC	4 cut(s)	65, 1007, 1753, 2152
AsuC2I	CCSGG	1 cut(s)	1757
AsuHPI	GGTGA	6 cut(s)	704, 1183, 1559, 1894, 2471, 3086
AsuII	TTCGAA	2 cut(s)	2071, 2538
AvaI	CYCGRG	1 cut(s)	1632
AvaII	GGWCC	3 cut(s)	65, 1753, 2152
BaeGI	GKGCMC	1 cut(s)	1129
BaeI	ACNNNNGTAYC	4 cut(s)	567, 575, 600, 608
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	1 cut(s)	1049
BarI	GAAGNNNNNNTAC	2 cut(s)	172, 204
BauI	CACGAG	1 cut(s)	891
BbsI	GAAGAC	6 cut(s)	654, 804, 1062, 1125, 2151, 3007
Bbv12I	GWGCWC	1 cut(s)	1129
BbvCI	CCTCAGC	1 cut(s)	22
BbvI	GCAGC	3 cut(s)	13, 43, 578
BcgI	CGANNNNNNTGC	4 cut(s)	20, 54, 2156, 2190
BciT130I	CCWGG	7 cut(s)	276, 393, 920, 1032, 1859, 1973, 2300
BciVI	GTATCC	1 cut(s)	264
BcnI	CCSGG	1 cut(s)	1757
BcoDI	GTCTC	2 cut(s)	96, 360
BfaI	CTAG	6 cut(s)	210, 645, 735, 996, 1544, 2456
BfmI	CTRYAG	1 cut(s)	1737
BfuAI	ACCTGC	1 cut(s)	373
BfuI	GTATCC	1 cut(s)	264
BglI	GCCNNNNNGGC	1 cut(s)	40
BglII	AGATCT	1 cut(s)	1762
BisI	GCNGC	5 cut(s)	27, 32, 567, 1815, 2867
BlpI	GCTNAGC	1 cut(s)	397
BlsI	GCNGC	5 cut(s)	28, 33, 568, 1816, 2868
BmcAI	AGTACT	2 cut(s)	1210, 1574
Bme1390I	CCNGG	8 cut(s)	276, 393, 920, 1032, 1757, 1859, 1973, 2300
Bme18I	GGWCC	3 cut(s)	65, 1753, 2152
BmeT110I	CYCGRG	1 cut(s)	1632
BmgT120I	GGNCC	4 cut(s)	65, 1007, 1753, 2152
BmiI	GGNNCC	6 cut(s)	66, 114, 585, 1009, 1754, 3028
BmrFI	CCNGG	8 cut(s)	276, 393, 920, 1032, 1757, 1859, 1973, 2300
BmrI	ACTGGG	2 cut(s)	481, 1043
BmsI	GCATC	9 cut(s)	192, 378, 772, 794, 1922, 2186, 2263, 2878, 3025
BmuI	ACTGGG	2 cut(s)	481, 1043
BpiI	GAAGAC	6 cut(s)	654, 804, 1062, 1125, 2151, 3007
BpmI	CTGGAG	3 cut(s)	33, 1233, 1616
Bpu10I	CCTNAGC	1 cut(s)	22
Bpu1102I	GCTNAGC	1 cut(s)	397
Bpu14I	TTCGAA	2 cut(s)	2071, 2538
BpuEI	CTTGAG	4 cut(s)	489, 1263, 1299, 2012
BpuMI	CCSGG	1 cut(s)	1757
BsaJI	CCNNGG	9 cut(s)	60, 539, 918, 919, 1031, 1665, 2298, 2415, 2880
BsaWI	WCCGGW	3 cut(s)	580, 593, 2859
BsaXI	ACNNNNNCTCC	4 cut(s)	869, 899, 1165, 1195
Bsc4I	CCNNNNNNNGG	3 cut(s)	593, 1032, 1996
Bse118I	RCCGGY	1 cut(s)	580
Bse3DI	GCAATG	2 cut(s)	1092, 2283
BseBI	CCWGG	7 cut(s)	276, 393, 920, 1032, 1859, 1973, 2300
BseDI	CCNNGG	9 cut(s)	60, 539, 918, 919, 1031, 1665, 2298, 2415, 2880
BseGI	GGATG	8 cut(s)	83, 207, 1041, 2224, 2278, 2776, 2890, 3028
BseLI	CCNNNNNNNGG	3 cut(s)	593, 1032, 1996
BseMI	GCAATG	2 cut(s)	1092, 2283
BseMII	CTCAG	4 cut(s)	29, 36, 274, 371
BseRI	GAGGAG	8 cut(s)	36, 890, 1394, 2021, 2441, 2666, 2699, 2921
BseSI	GKGCMC	1 cut(s)	1129
BseXI	GCAGC	3 cut(s)	13, 43, 578
BseYI	CCCAGC	2 cut(s)	456, 1010
BsgI	GTGCAG	2 cut(s)	585, 1314
Bsh1236I	CGCG	3 cut(s)	1986, 2061, 2130
BshFI	GGCC	4 cut(s)	43, 265, 331, 1008
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	1 cut(s)	580
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiHKCI	CYCGRG	1 cut(s)	1632
BsiSI	CCGG	4 cut(s)	581, 594, 1756, 2860
BsiWI	CGTACG	1 cut(s)	2163
BslFI	GGGAC	3 cut(s)	186, 469, 1766
BslI	CCNNNNNNNGG	3 cut(s)	593, 1032, 1996
BsmAI	GTCTC	2 cut(s)	96, 360
BsmBI	CGTCTC	1 cut(s)	96
BsmFI	GGGAC	3 cut(s)	186, 469, 1766
BsmI	GAATGC	2 cut(s)	417, 1155
BsnI	GGCC	4 cut(s)	43, 265, 331, 1008
BsoBI	CYCGRG	1 cut(s)	1632
Bsp119I	TTCGAA	2 cut(s)	2071, 2538
Bsp1286I	GDGCHC	2 cut(s)	1049, 1129
Bsp143I	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
Bsp1720I	GCTNAGC	1 cut(s)	397
Bsp19I	CCATGG	1 cut(s)	2880
Bsp68I	TCGCGA	1 cut(s)	1986
BspACI	CCGC	9 cut(s)	408, 587, 1187, 1814, 1897, 2041, 2059, 2866, 2947
BspANI	GGCC	4 cut(s)	43, 265, 331, 1008
BspCNI	CTCAG	4 cut(s)	28, 35, 273, 370
BspFNI	CGCG	3 cut(s)	1986, 2061, 2130
BspHI	TCATGA	1 cut(s)	2248
BspLI	GGNNCC	6 cut(s)	66, 114, 585, 1009, 1754, 3028
BspMI	ACCTGC	1 cut(s)	373
BspPI	GGATC	2 cut(s)	1000, 1114
BspT104I	TTCGAA	2 cut(s)	2071, 2538
BspT107I	GGYRCC	1 cut(s)	583
BsrDI	GCAATG	2 cut(s)	1092, 2283
BsrFI	RCCGGY	1 cut(s)	580
BssAI	RCCGGY	1 cut(s)	580
BssECI	CCNNGG	9 cut(s)	60, 539, 918, 919, 1031, 1665, 2298, 2415, 2880
BssMI	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
BssSI	CACGAG	1 cut(s)	891
BssT1I	CCWWGG	5 cut(s)	60, 539, 1665, 2415, 2880
Bst2BI	CACGAG	1 cut(s)	891
Bst2UI	CCWGG	7 cut(s)	276, 393, 920, 1032, 1859, 1973, 2300
Bst6I	CTCTTC	6 cut(s)	99, 1599, 1653, 1998, 2565, 2910
BstAPI	GCANNNNNTGC	2 cut(s)	319, 1436
BstBI	TTCGAA	2 cut(s)	2071, 2538
BstC8I	GCNNGC	6 cut(s)	207, 513, 1191, 1560, 1937, 2645
BstDEI	CTNAG	9 cut(s)	15, 22, 260, 357, 397, 858, 1915, 2763, 2922
BstDSI	CCRYGG	1 cut(s)	2880
BstEII	GGTNACC	1 cut(s)	2293
BstENI	CCTNNNNNAGG	1 cut(s)	1994
BstF5I	GGATG	8 cut(s)	83, 207, 1041, 2224, 2278, 2776, 2890, 3028
BstFNI	CGCG	3 cut(s)	1986, 2061, 2130
BstHHI	GCGC	4 cut(s)	31, 1099, 1614, 2130
BstKTI	GATC	8 cut(s)	995, 1109, 1509, 1765, 1825, 1912, 2561, 2957
BstMAI	GTCTC	2 cut(s)	96, 360
BstMBI	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
BstNI	CCWGG	7 cut(s)	276, 393, 920, 1032, 1859, 1973, 2300
BstNSI	RCATGY	3 cut(s)	322, 521, 2093
BstPI	GGTNACC	1 cut(s)	2293
BstSCI	CCNGG	8 cut(s)	274, 391, 918, 1030, 1755, 1857, 1971, 2298
BstSFI	CTRYAG	1 cut(s)	1737
BstSLI	GKGCMC	1 cut(s)	1129
BstUI	CGCG	3 cut(s)	1986, 2061, 2130
BstV1I	GCAGC	3 cut(s)	13, 43, 578
BstV2I	GAAGAC	6 cut(s)	654, 804, 1062, 1125, 2151, 3007
BstX2I	RGATCY	2 cut(s)	992, 1762
BstYI	RGATCY	2 cut(s)	992, 1762
BsuI	GTATCC	1 cut(s)	264
BsuRI	GGCC	4 cut(s)	43, 265, 331, 1008
BtgI	CCRYGG	1 cut(s)	2880
BtgZI	GCGATG	1 cut(s)	2076
BtsCI	GGATG	8 cut(s)	83, 207, 1041, 2224, 2278, 2776, 2890, 3028
BtsIMutI	CAGTG	5 cut(s)	114, 1257, 1898, 2309, 2989
BtuMI	TCGCGA	1 cut(s)	1986
BveI	ACCTGC	1 cut(s)	373
Cac8I	GCNNGC	6 cut(s)	207, 513, 1191, 1560, 1937, 2645
CaiI	CAGNNNCTG	2 cut(s)	629, 1352
CciI	TCATGA	1 cut(s)	2248
CfoI	GCGC	4 cut(s)	31, 1099, 1614, 2130
Cfr10I	RCCGGY	1 cut(s)	580
Cfr13I	GGNCC	4 cut(s)	65, 1007, 1753, 2152
CseI	GACGC	2 cut(s)	1928, 2435
Csp6I	GTAC	6 cut(s)	584, 1209, 1257, 1573, 2103, 2164
CspAI	ACCGGT	1 cut(s)	580
CviQI	GTAC	6 cut(s)	584, 1209, 1257, 1573, 2103, 2164
DdeI	CTNAG	9 cut(s)	15, 22, 260, 357, 397, 858, 1915, 2763, 2922
DpnI	GATC	8 cut(s)	994, 1108, 1508, 1764, 1824, 1911, 2560, 2956
DpnII	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
DraI	TTTAAA	2 cut(s)	1444, 1536
Eam1104I	CTCTTC	6 cut(s)	99, 1599, 1653, 1998, 2565, 2910
EarI	CTCTTC	6 cut(s)	99, 1599, 1653, 1998, 2565, 2910
EciI	GGCGGA	2 cut(s)	423, 1912
Eco130I	CCWWGG	5 cut(s)	60, 539, 1665, 2415, 2880
Eco147I	AGGCCT	1 cut(s)	331
Eco24I	GRGCYC	1 cut(s)	1049
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	3 cut(s)	65, 1753, 2152
Eco57I	CTGAAG	5 cut(s)	798, 957, 1005, 1839, 2247
Eco88I	CYCGRG	1 cut(s)	1632
Eco91I	GGTNACC	1 cut(s)	2293
EcoNI	CCTNNNNNAGG	1 cut(s)	1994
EcoO109I	RGGNCCY	2 cut(s)	65, 2152
EcoO65I	GGTNACC	1 cut(s)	2293
EcoRII	CCWGG	7 cut(s)	274, 391, 918, 1030, 1857, 1971, 2298
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	5 cut(s)	60, 539, 1665, 2415, 2880
EcoT22I	ATGCAT	2 cut(s)	787, 1441
EcoT38I	GRGCYC	1 cut(s)	1049
ErhI	CCWWGG	5 cut(s)	60, 539, 1665, 2415, 2880
Esp3I	CGTCTC	1 cut(s)	96
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FaqI	GGGAC	3 cut(s)	186, 469, 1766
FauI	CCCGC	1 cut(s)	2034
FauNDI	CATATG	1 cut(s)	451
FblI	GTMKAC	1 cut(s)	2793
Fnu4HI	GCNGC	5 cut(s)	27, 32, 567, 1815, 2867
FokI	GGATG	8 cut(s)	70, 214, 1048, 2231, 2285, 2783, 2897, 3035
FriOI	GRGCYC	1 cut(s)	1049
Fsp4HI	GCNGC	5 cut(s)	27, 32, 567, 1815, 2867
FspBI	CTAG	6 cut(s)	210, 645, 735, 996, 1544, 2456
FspI	TGCGCA	1 cut(s)	30
GlaI	GCGC	4 cut(s)	30, 1098, 1613, 2129
GluI	GCNGC	5 cut(s)	27, 32, 567, 1815, 2867
GsaI	CCCAGC	2 cut(s)	460, 1014
GsuI	CTGGAG	3 cut(s)	33, 1233, 1616
HaeIII	GGCC	4 cut(s)	43, 265, 331, 1008
HapII	CCGG	4 cut(s)	581, 594, 1756, 2860
HgaI	GACGC	2 cut(s)	1928, 2435
HhaI	GCGC	4 cut(s)	31, 1099, 1614, 2130
Hin6I	GCGC	4 cut(s)	29, 1097, 1612, 2128
HinP1I	GCGC	4 cut(s)	29, 1097, 1612, 2128
HincII	GTYRAC	3 cut(s)	599, 1234, 2450
HindII	GTYRAC	3 cut(s)	599, 1234, 2450
HindIII	AAGCTT	1 cut(s)	2384
HinfI	GANTC	9 cut(s)	626, 854, 1369, 1457, 1661, 1728, 1862, 2918, 2975
HpaII	CCGG	4 cut(s)	581, 594, 1756, 2860
HphI	GGTGA	6 cut(s)	704, 1183, 1559, 1894, 2471, 3086
Hpy166II	GTNNAC	9 cut(s)	599, 864, 896, 1127, 1234, 1471, 1885, 2450, 2794
Hpy8I	GTNNAC	9 cut(s)	599, 864, 896, 1127, 1234, 1471, 1885, 2450, 2794
Hpy99I	CGWCG	3 cut(s)	691, 2102, 3036
HpyCH4IV	ACGT	5 cut(s)	338, 686, 809, 928, 2734
HpyF3I	CTNAG	9 cut(s)	15, 22, 260, 357, 397, 858, 1915, 2763, 2922
HpySE526I	ACGT	5 cut(s)	338, 686, 809, 928, 2734
HspAI	GCGC	4 cut(s)	29, 1097, 1612, 2128
KpnI	GGTACC	1 cut(s)	587
Kzo9I	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
LmnI	GCTCC	4 cut(s)	1304, 1489, 1692, 2008
Lsp1109I	GCAGC	3 cut(s)	13, 43, 578
LweI	GCATC	9 cut(s)	192, 378, 772, 794, 1922, 2186, 2263, 2878, 3025
MaeI	CTAG	6 cut(s)	210, 645, 735, 996, 1544, 2456
MaeII	ACGT	5 cut(s)	338, 686, 809, 928, 2734
MalI	GATC	8 cut(s)	994, 1108, 1508, 1764, 1824, 1911, 2560, 2956
MboI	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
MfeI	CAATTG	2 cut(s)	2033, 2562
MflI	RGATCY	2 cut(s)	992, 1762
MhlI	GDGCHC	2 cut(s)	1049, 1129
MlyI	GAGTC	3 cut(s)	1363, 1670, 2927
MmeI	TCCRAC	2 cut(s)	140, 1635
Mph1103I	ATGCAT	2 cut(s)	787, 1441
MroXI	GAANNNNTTC	1 cut(s)	928
MslI	CAYNNNNRTG	2 cut(s)	2940, 3021
MspA1I	CMGCKG	2 cut(s)	26, 977
MspI	CCGG	4 cut(s)	581, 594, 1756, 2860
MspR9I	CCNGG	8 cut(s)	276, 393, 920, 1032, 1757, 1859, 1973, 2300
MunI	CAATTG	2 cut(s)	2033, 2562
Mva1269I	GAATGC	2 cut(s)	417, 1155
MvaI	CCWGG	7 cut(s)	276, 393, 920, 1032, 1859, 1973, 2300
MvnI	CGCG	3 cut(s)	1986, 2061, 2130
NciI	CCSGG	1 cut(s)	1757
NcoI	CCATGG	1 cut(s)	2880
NdeI	CATATG	1 cut(s)	451
NdeII	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
NlaIV	GGNNCC	6 cut(s)	66, 114, 585, 1009, 1754, 3028
NmuCI	GTSAC	8 cut(s)	294, 526, 1171, 1177, 1366, 1868, 2459, 2942
NruI	TCGCGA	1 cut(s)	1986
NsbI	TGCGCA	1 cut(s)	30
NsiI	ATGCAT	2 cut(s)	787, 1441
NspI	RCATGY	3 cut(s)	322, 521, 2093
NspV	TTCGAA	2 cut(s)	2071, 2538
PagI	TCATGA	1 cut(s)	2248
PasI	CCCWGGG	1 cut(s)	919
PceI	AGGCCT	1 cut(s)	331
PciI	ACATGT	2 cut(s)	517, 2089
PctI	GAATGC	2 cut(s)	417, 1155
PdmI	GAANNNNTTC	1 cut(s)	928
PfeI	GAWTC	6 cut(s)	626, 854, 1457, 1728, 1862, 2975
Pfl23II	CGTACG	1 cut(s)	2163
PflFI	GACNNNGTC	1 cut(s)	1372
PfoI	TCCNGGA	2 cut(s)	1857, 1971
PinAI	ACCGGT	1 cut(s)	580
PkrI	GCNGC	5 cut(s)	28, 33, 568, 1816, 2868
PleI	GAGTC	3 cut(s)	1363, 1669, 2926
PpsI	GAGTC	3 cut(s)	1363, 1669, 2926
PpuMI	RGGWCCY	2 cut(s)	65, 2152
PscI	ACATGT	2 cut(s)	517, 2089
PshBI	ATTAAT	1 cut(s)	1512
Psp5II	RGGWCCY	2 cut(s)	65, 2152
Psp6I	CCWGG	7 cut(s)	274, 391, 918, 1030, 1857, 1971, 2298
PspEI	GGTNACC	1 cut(s)	2293
PspFI	CCCAGC	2 cut(s)	456, 1010
PspGI	CCWGG	7 cut(s)	274, 391, 918, 1030, 1857, 1971, 2298
PspLI	CGTACG	1 cut(s)	2163
PspN4I	GGNNCC	6 cut(s)	66, 114, 585, 1009, 1754, 3028
PspPI	GGNCC	4 cut(s)	65, 1007, 1753, 2152
PspPPI	RGGWCCY	2 cut(s)	65, 2152
PstNI	CAGNNNCTG	2 cut(s)	629, 1352
PsuI	RGATCY	2 cut(s)	992, 1762
PsyI	GACNNNGTC	1 cut(s)	1372
PvuII	CAGCTG	2 cut(s)	26, 977
RruI	TCGCGA	1 cut(s)	1986
RsaI	GTAC	6 cut(s)	585, 1210, 1258, 1574, 2104, 2165
RsaNI	GTAC	6 cut(s)	584, 1209, 1257, 1573, 2103, 2164
RseI	CAYNNNNRTG	2 cut(s)	2940, 3021
SatI	GCNGC	5 cut(s)	27, 32, 567, 1815, 2867
Sau3AI	GATC	8 cut(s)	992, 1106, 1506, 1762, 1822, 1909, 2558, 2954
Sau96I	GGNCC	4 cut(s)	65, 1007, 1753, 2152
ScaI	AGTACT	2 cut(s)	1210, 1574
SchI	GAGTC	3 cut(s)	1363, 1670, 2927
ScrFI	CCNGG	8 cut(s)	276, 393, 920, 1032, 1757, 1859, 1973, 2300
SduI	GDGCHC	2 cut(s)	1049, 1129
SfaNI	GCATC	9 cut(s)	192, 378, 772, 794, 1922, 2186, 2263, 2878, 3025
SfcI	CTRYAG	1 cut(s)	1737
SfuI	TTCGAA	2 cut(s)	2071, 2538
SinI	GGWCC	3 cut(s)	65, 1753, 2152
SmiMI	CAYNNNNRTG	2 cut(s)	2940, 3021
SmlI	CTYRAG	4 cut(s)	504, 1278, 1314, 1991
SmoI	CTYRAG	4 cut(s)	504, 1278, 1314, 1991
SseBI	AGGCCT	1 cut(s)	331
SsiI	CCGC	9 cut(s)	408, 587, 1187, 1814, 1897, 2041, 2059, 2866, 2947
SspI	AATATT	1 cut(s)	1837
SspMI	CTAG	6 cut(s)	210, 645, 735, 996, 1544, 2456
StuI	AGGCCT	1 cut(s)	331
StyD4I	CCNGG	8 cut(s)	274, 391, 918, 1030, 1755, 1857, 1971, 2298
StyI	CCWWGG	5 cut(s)	60, 539, 1665, 2415, 2880
TaiI	ACGT	5 cut(s)	341, 689, 812, 931, 2737
TaqI	TCGA	6 cut(s)	103, 1043, 1323, 2071, 2538, 3034
TatI	WGTACW	2 cut(s)	1208, 1572
TauI	GCSGC	2 cut(s)	1817, 2869
TfiI	GAWTC	6 cut(s)	626, 854, 1457, 1728, 1862, 2975
TscAI	CASTG	5 cut(s)	114, 1257, 1898, 2316, 2989
TseFI	GTSAC	8 cut(s)	294, 526, 1171, 1177, 1366, 1868, 2459, 2942
TseI	GCWGC	3 cut(s)	26, 31, 566
Tsp45I	GTSAC	8 cut(s)	294, 526, 1171, 1177, 1366, 1868, 2459, 2942
TspGWI	ACGGA	1 cut(s)	1362
TspRI	CASTG	5 cut(s)	114, 1257, 1898, 2316, 2989
Tth111I	GACNNNGTC	1 cut(s)	1372
VneI	GTGCAC	1 cut(s)	1125
VpaK11BI	GGWCC	3 cut(s)	65, 1753, 2152
VspI	ATTAAT	1 cut(s)	1512
XagI	CCTNNNNNAGG	1 cut(s)	1994
XapI	RAATTY	5 cut(s)	940, 1640, 1853, 2324, 3087
XceI	RCATGY	3 cut(s)	322, 521, 2093
XmiI	GTMKAC	1 cut(s)	2793
XmnI	GAANNNNTTC	1 cut(s)	928
XspI	CTAG	6 cut(s)	210, 645, 735, 996, 1544, 2456
ZrmI	AGTACT	2 cut(s)	1210, 1574
Zsp2I	ATGCAT	2 cut(s)	787, 1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.