Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009577

Physical Location & Seq

Genomic Coordinates Reverse (-)

52312006 .. 52314537

Gene Structure 2532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0376800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGATTCAGGAGAAAAGTGTCTCAATGAGCTCGGATACAAGCAAGAATTGAGAAGGGAAATGACACTGTTCAAGACACTTGCAATAACATTTTCATGCATGTCAGTGTTCACTGGTACACCTCTCTATGGCCAAAGCTTGGGTTATGCAGGTCCTGCAACATTGATATGGGGTTGGGTAGTTGTTACATTTTTCACATGGTTTGTCGGAATCGCCATGGCTGAAATTTGCTCTTCTTTCCCGACTACAGGTTCTCTTTATTTCTGGGCTGCTCATTTGGCTGGACCCAGGTGGGGTCCATTTGCTTCATGGTGCTGTGCTTGGCTCGAAGCCATCGGTTTGATATCTGCAATAGGTGCGCAGGCATTTTCCGGATCACAAACATTACAGATGATCATTCTTATAGCCACCGGGAACAACAAGGGTGGAGGCTATTTTGCATCAAAGGGTGTGTTTTTGTGCATGTATTTGGGTCTAATCATCATTTGGGCAGTACTAAACTCCTTTGCATTACAAGTGATAGCAATTCTCAACATAATCTCCATATGGTGGCAGGTACTCGGTGGTGTGGTTGTGATTATAATGCTTCCTTTGGTGGCTACTTCAACACAAACAGCTTCTTATGTCTTCACTCACTTCGAAACATCTCCTGAGTCAACTGGAATATCTAGTATACCGTATGCAGTTATTTTATCAGTGCTTCTGAGCAACTACTGTCTATACGGCTATGATGCTGCAGCTCATCTTACAGAGGAGACCAAAGGCGCAGATAGAACTGGTCCGATAGCTATTTTATCTAGTATTGGGATTGTATCAGTGGTTAGTTGGGCTTATTACTTAGCTCTCACTTTCAGCATAAGGGATTTGGACTATTTATATAGTACAAACAATGAGACTGCTGGTGTATCTGTGCCAGCACAGATTATATACGATGCATTCCATGGAAGGTATCAGAATTCAACTGGAGCTGTGGTATTTCTATGCATTATATGGGGTTCCTTTTTCTTTTGTGGGCTGTCTGTTGTCACTAGTGCTGCTCGAGTAGTTTATGCCATATCAAGGGATAAATGTATCCCATTTTCACCAATCTGGAGGAAAGTAAACCCGAGGAACAAGGTTCCAACAAATGCTGTGTGGCTTTGTGCTACCATTGGTATGCTGCTTGGATTACCTATCTTGAAAATTGAAGCAGTATTCACAGCCATTGTTTCCATTAGTACAATCGGCTGGGTGGGGGGCTATGCTGTACCGATATTTGCTAGGCTGGTGATGGCCGAAGAGAACTTCAAACCAGGACCCTTCTACTTGGGTAGAGCAAGCAGGCCAGTTTGCTTGGTGGCCTTCTTGTGGATATGCTATACCTGTTCAGTGTTCCTATTGCCGGTTACCTACCCTCTTAGGTGGACAAATTTCAACTATGCACCAGTTGCTGTCGGTGTTGCTTTGGCACTAGTAATGTTTTGGTGGGCTGTGGATGCAAGGAAATGGTTCAAGGGACCTGTAAGAAACATTGATGAACAAAATGGAAACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005685 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006928 GO:0006996 GO:0007010 GO:0008150 GO:0008152 GO:0008360 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0016477 GO:0016592 GO:0016604 GO:0016607 GO:0022603 GO:0022604 GO:0030532 GO:0031974 GO:0031981 GO:0032465 GO:0032991 GO:0034399 GO:0034641 GO:0040011 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051302 GO:0051674 GO:0051726 GO:0065007 GO:0065008 GO:0070013 GO:0070064 GO:0071004 GO:0071010 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

FF WW

Protein Analysis

511

Amino Acids

56.06

Weight (kDa)

8.56

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	23 - 480	9e-51	Amino acid permease
AA_permease	PF00324	44 - 471	8.6e-17	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44910 AT1G44910
fragaria_vesca	FvH4_2g32680 FvH4_2g32680 FvH4_2g32680 FvH4_2g32680
malus_domestica	MD08G1078500.v1.1 MD15G1065300.v1.1
prunus_persica	Prupe.1G419400_v2.0.a1
pyrus_communis	pycom08g06490 pycom15g06180
rosa_chinensis	RchiOBHm_Chr6g0309991
rosa_laevigata	RLG00000010518
rosa_multiflora	Rmu_sc0000294.1_g000011
rosa_roxburghii	Rroxscaffold_7G00158970
rosa_rugosa	Rorug06G0376700 Rorug06G0376800
rosa_samantha	Rh6AG490400 Rh6BG499900 Rh6CG504800 Rh6DG490800
rosa_wichuraiana	Rw6G042690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	581
Acc16I	TGCGCA	1 cut(s)	360
Acc36I	ACCTGC	2 cut(s)	140, 544
AccB7I	CCANNNNNTGG	2 cut(s)	139, 549
AccI	GTMKAC	1 cut(s)	673
AccIII	TCCGGA	1 cut(s)	371
AclWI	GGATC	1 cut(s)	382
AcoI	YGGCCR	2 cut(s)	130, 1272
AcsI	RAATTY	3 cut(s)	225, 955, 1408
AfaI	GTAC	6 cut(s)	118, 495, 558, 883, 1219, 1248
AfiI	CCNNNNNNNGG	8 cut(s)	128, 139, 248, 293, 549, 1059, 1347, 1381
AgsI	TTSAA	8 cut(s)	73, 606, 960, 1180, 1187, 1288, 1414, 1492
AhlI	ACTAGT	2 cut(s)	1028, 1450
AjnI	CCWGG	2 cut(s)	287, 1291
AluBI	AGCT	7 cut(s)	31, 138, 617, 740, 788, 842, 968
AluI	AGCT	7 cut(s)	31, 138, 617, 740, 788, 842, 968
Alw21I	GWGCWC	1 cut(s)	33
Alw26I	GTCTC	3 cut(s)	26, 749, 887
AlwI	GGATC	1 cut(s)	382
AlwNI	CAGNNNCTG	2 cut(s)	155, 1430
Ama87I	CYCGRG	2 cut(s)	1038, 1105
Aor13HI	TCCGGA	1 cut(s)	371
AoxI	GGCC	4 cut(s)	130, 1272, 1322, 1338
ApeKI	GCWGC	5 cut(s)	269, 734, 737, 1034, 1159
ApoI	RAATTY	3 cut(s)	225, 955, 1408
Asp700I	GAANNNNTTC	1 cut(s)	1487
AspLEI	GCGC	2 cut(s)	361, 767
AspS9I	GGNCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
AsuC2I	CCSGG	1 cut(s)	412
AsuHPI	GGTGA	2 cut(s)	1074, 1279
AsuII	TTCGAA	1 cut(s)	639
AvaI	CYCGRG	2 cut(s)	1038, 1105
AvaII	GGWCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
BalI	TGGCCA	1 cut(s)	132
BanII	GRGCYC	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	619
Bbv12I	GWGCWC	1 cut(s)	33
BbvI	GCAGC	5 cut(s)	256, 721, 749, 1021, 1146
BccI	CCATC	2 cut(s)	341, 1264
BceAI	ACGGC	1 cut(s)	739
BciT130I	CCWGG	2 cut(s)	289, 1293
BciVI	GTATCC	2 cut(s)	29, 1082
BclI	TGATCA	1 cut(s)	393
BcnI	CCSGG	1 cut(s)	412
BcoDI	GTCTC	3 cut(s)	26, 749, 887
BcuI	ACTAGT	2 cut(s)	1028, 1450
BfaI	CTAG	5 cut(s)	669, 798, 1029, 1260, 1451
BfmI	CTRYAG	2 cut(s)	246, 735
BfuAI	ACCTGC	2 cut(s)	140, 544
BfuI	GTATCC	2 cut(s)	29, 1082
BisI	GCNGC	5 cut(s)	270, 735, 738, 1035, 1160
BlsI	GCNGC	5 cut(s)	271, 736, 739, 1036, 1161
BmcAI	AGTACT	1 cut(s)	495
Bme1390I	CCNGG	3 cut(s)	289, 412, 1293
Bme18I	GGWCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
BmeT110I	CYCGRG	2 cut(s)	1038, 1105
BmgT120I	GGNCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
BmiI	GGNNCC	6 cut(s)	286, 297, 997, 1119, 1297, 1497
BmrFI	CCNGG	3 cut(s)	289, 412, 1293
BmsI	GCATC	4 cut(s)	449, 721, 922, 1465
BpiI	GAAGAC	1 cut(s)	619
BpmI	CTGGAG	2 cut(s)	984, 1111
Bpu14I	TTCGAA	1 cut(s)	639
BpuMI	CCSGG	1 cut(s)	412
BsaI	GGTCTC	1 cut(s)	749
BsaJI	CCNNGG	4 cut(s)	216, 287, 940, 1106
BsaWI	WCCGGW	1 cut(s)	371
BsaXI	ACNNNNNCTCC	4 cut(s)	524, 554, 957, 987
Bsc4I	CCNNNNNNNGG	8 cut(s)	128, 139, 248, 293, 549, 1059, 1347, 1381
Bse118I	RCCGGY	1 cut(s)	1381
Bse1I	ACTGG	6 cut(s)	118, 664, 781, 967, 1325, 1424
BseAI	TCCGGA	1 cut(s)	371
BseBI	CCWGG	2 cut(s)	289, 1293
BseDI	CCNNGG	4 cut(s)	216, 287, 940, 1106
BseGI	GGATG	1 cut(s)	1480
BseLI	CCNNNNNNNGG	8 cut(s)	128, 139, 248, 293, 549, 1059, 1347, 1381
BseMII	CTCAG	2 cut(s)	642, 695
BseNI	ACTGG	6 cut(s)	118, 664, 781, 967, 1325, 1424
BseRI	GAGGAG	1 cut(s)	767
BseXI	GCAGC	5 cut(s)	256, 721, 749, 1021, 1146
BseYI	CCCAGC	1 cut(s)	1227
BshFI	GGCC	4 cut(s)	132, 1274, 1324, 1340
BsiHKAI	GWGCWC	1 cut(s)	33
BsiHKCI	CYCGRG	2 cut(s)	1038, 1105
BsiSI	CCGG	3 cut(s)	372, 411, 1382
BslFI	GGGAC	1 cut(s)	1509
BslI	CCNNNNNNNGG	8 cut(s)	128, 139, 248, 293, 549, 1059, 1347, 1381
BsmAI	GTCTC	3 cut(s)	26, 749, 887
BsmFI	GGGAC	1 cut(s)	1509
BsmI	GAATGC	1 cut(s)	935
BsnI	GGCC	4 cut(s)	132, 1274, 1324, 1340
Bso31I	GGTCTC	1 cut(s)	749
BsoBI	CYCGRG	2 cut(s)	1038, 1105
Bsp119I	TTCGAA	1 cut(s)	639
Bsp1286I	GDGCHC	1 cut(s)	33
Bsp13I	TCCGGA	1 cut(s)	371
Bsp143I	GATC	2 cut(s)	374, 393
Bsp19I	CCATGG	2 cut(s)	216, 940
BspANI	GGCC	4 cut(s)	132, 1274, 1324, 1340
BspCNI	CTCAG	2 cut(s)	643, 696
BspEI	TCCGGA	1 cut(s)	371
BspLI	GGNNCC	6 cut(s)	286, 297, 997, 1119, 1297, 1497
BspMAI	CTGCAG	1 cut(s)	739
BspMI	ACCTGC	2 cut(s)	140, 544
BspPI	GGATC	1 cut(s)	382
BspQI	GCTCTTC	1 cut(s)	238
BspT104I	TTCGAA	1 cut(s)	639
BspTNI	GGTCTC	1 cut(s)	749
BsrFI	RCCGGY	1 cut(s)	1381
BsrI	ACTGG	6 cut(s)	118, 664, 781, 967, 1325, 1424
BssAI	RCCGGY	1 cut(s)	1381
BssECI	CCNNGG	4 cut(s)	216, 287, 940, 1106
BssMI	GATC	2 cut(s)	374, 393
BssNAI	GTATAC	1 cut(s)	674
BssT1I	CCWWGG	2 cut(s)	216, 940
Bst1107I	GTATAC	1 cut(s)	674
Bst2UI	CCWGG	2 cut(s)	289, 1293
Bst4CI	ACNGT	3 cut(s)	69, 678, 716
Bst6I	CTCTTC	2 cut(s)	238, 1272
BstAPI	GCANNNNNTGC	3 cut(s)	155, 356, 1427
BstBI	TTCGAA	1 cut(s)	639
BstC8I	GCNNGC	4 cut(s)	363, 915, 1318, 1322
BstDEI	CTNAG	4 cut(s)	651, 704, 838, 1397
BstDSI	CCRYGG	2 cut(s)	216, 940
BstEII	GGTNACC	1 cut(s)	1384
BstF5I	GGATG	1 cut(s)	1480
BstHHI	GCGC	2 cut(s)	361, 767
BstKTI	GATC	2 cut(s)	377, 396
BstMAI	GTCTC	3 cut(s)	26, 749, 887
BstMBI	GATC	2 cut(s)	374, 393
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 278, 356, 1427, 1475
BstNI	CCWGG	2 cut(s)	289, 1293
BstNSI	RCATGY	2 cut(s)	103, 466
BstPI	GGTNACC	1 cut(s)	1384
BstSCI	CCNGG	3 cut(s)	287, 410, 1291
BstSFI	CTRYAG	2 cut(s)	246, 735
BstV1I	GCAGC	5 cut(s)	256, 721, 749, 1021, 1146
BstV2I	GAAGAC	1 cut(s)	619
BstZ17I	GTATAC	1 cut(s)	674
BsuI	GTATCC	2 cut(s)	29, 1082
BsuRI	GGCC	4 cut(s)	132, 1274, 1324, 1340
BtgI	CCRYGG	2 cut(s)	216, 940
BtsCI	GGATG	1 cut(s)	1480
BtsIMutI	CAGTG	6 cut(s)	65, 111, 111, 702, 822, 1374
BveI	ACCTGC	2 cut(s)	140, 544
Cac8I	GCNNGC	4 cut(s)	363, 915, 1318, 1322
CaiI	CAGNNNCTG	2 cut(s)	155, 1430
CfoI	GCGC	2 cut(s)	361, 767
Cfr10I	RCCGGY	1 cut(s)	1381
Cfr13I	GGNCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
Csp6I	GTAC	6 cut(s)	117, 494, 557, 882, 1218, 1247
CspCI	CAANNNNNGTGG	2 cut(s)	406, 441
CviAII	CATG	7 cut(s)	96, 100, 198, 217, 309, 463, 941
CviQI	GTAC	6 cut(s)	117, 494, 557, 882, 1218, 1247
DdeI	CTNAG	4 cut(s)	651, 704, 838, 1397
DpnI	GATC	2 cut(s)	376, 395
DpnII	GATC	2 cut(s)	374, 393
EaeI	YGGCCR	2 cut(s)	130, 1272
Eam1104I	CTCTTC	2 cut(s)	238, 1272
EarI	CTCTTC	2 cut(s)	238, 1272
Ecl136II	GAGCTC	1 cut(s)	31
Eco130I	CCWWGG	2 cut(s)	216, 940
Eco24I	GRGCYC	1 cut(s)	33
Eco31I	GGTCTC	1 cut(s)	749
Eco32I	GATATC	1 cut(s)	345
Eco47I	GGWCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
Eco53kI	GAGCTC	1 cut(s)	31
Eco88I	CYCGRG	2 cut(s)	1038, 1105
Eco91I	GGTNACC	1 cut(s)	1384
EcoICRI	GAGCTC	1 cut(s)	31
EcoO109I	RGGNCCY	3 cut(s)	152, 1295, 1496
EcoO65I	GGTNACC	1 cut(s)	1384
EcoRI	GAATTC	1 cut(s)	955
EcoRII	CCWGG	2 cut(s)	287, 1291
EcoRV	GATATC	1 cut(s)	345
EcoT14I	CCWWGG	2 cut(s)	216, 940
EcoT22I	ATGCAT	3 cut(s)	101, 937, 986
EcoT38I	GRGCYC	1 cut(s)	33
ErhI	CCWWGG	2 cut(s)	216, 940
FaeI	CATG	7 cut(s)	99, 103, 201, 220, 312, 466, 944
FaqI	GGGAC	1 cut(s)	1509
FatI	CATG	7 cut(s)	95, 99, 197, 216, 308, 462, 940
FauNDI	CATATG	1 cut(s)	545
FbaI	TGATCA	1 cut(s)	393
FblI	GTMKAC	1 cut(s)	673
Fnu4HI	GCNGC	5 cut(s)	270, 735, 738, 1035, 1160
FokI	GGATG	1 cut(s)	1487
FriOI	GRGCYC	1 cut(s)	33
Fsp4HI	GCNGC	5 cut(s)	270, 735, 738, 1035, 1160
FspBI	CTAG	5 cut(s)	669, 798, 1029, 1260, 1451
FspI	TGCGCA	1 cut(s)	360
GlaI	GCGC	2 cut(s)	360, 766
GluI	GCNGC	5 cut(s)	270, 735, 738, 1035, 1160
GsaI	CCCAGC	1 cut(s)	1231
GsuI	CTGGAG	2 cut(s)	984, 1111
HaeIII	GGCC	4 cut(s)	132, 1274, 1324, 1340
HapII	CCGG	3 cut(s)	372, 411, 1382
HhaI	GCGC	2 cut(s)	361, 767
Hin1II	CATG	7 cut(s)	99, 103, 201, 220, 312, 466, 944
Hin6I	GCGC	2 cut(s)	359, 765
HinP1I	GCGC	2 cut(s)	359, 765
HincII	GTYRAC	1 cut(s)	657
HindII	GTYRAC	1 cut(s)	657
HindIII	AAGCTT	1 cut(s)	136
HinfI	GANTC	3 cut(s)	5, 210, 653
HpaII	CCGG	3 cut(s)	372, 411, 1382
HphI	GGTGA	2 cut(s)	1074, 1279
Hpy166II	GTNNAC	6 cut(s)	111, 119, 657, 674, 1102, 1404
Hpy188I	TCNGA	5 cut(s)	35, 209, 705, 783, 954
Hpy188III	TCNNGA	7 cut(s)	9, 73, 241, 372, 650, 1090, 1177
Hpy8I	GTNNAC	6 cut(s)	111, 119, 657, 674, 1102, 1404
HpyAV	CCTTC	4 cut(s)	48, 939, 1309, 1351
HpyCH4III	ACNGT	3 cut(s)	69, 678, 716
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 278, 356, 1427, 1475
HpyF3I	CTNAG	4 cut(s)	651, 704, 838, 1397
Hsp92II	CATG	7 cut(s)	99, 103, 201, 220, 312, 466, 944
HspAI	GCGC	2 cut(s)	359, 765
Kpn2I	TCCGGA	1 cut(s)	371
Ksp22I	TGATCA	1 cut(s)	393
Kzo9I	GATC	2 cut(s)	374, 393
LguI	GCTCTTC	1 cut(s)	238
LmnI	GCTCC	1 cut(s)	965
Lsp1109I	GCAGC	5 cut(s)	256, 721, 749, 1021, 1146
LweI	GCATC	4 cut(s)	449, 721, 922, 1465
MaeI	CTAG	5 cut(s)	669, 798, 1029, 1260, 1451
MaeIII	GTNAC	3 cut(s)	184, 1024, 1384
MalI	GATC	2 cut(s)	376, 395
MboI	GATC	2 cut(s)	374, 393
MboII	GAAGA	3 cut(s)	225, 619, 1289
MhlI	GDGCHC	1 cut(s)	33
MlsI	TGGCCA	1 cut(s)	132
MluCI	AATT	6 cut(s)	47, 225, 525, 955, 1182, 1408
MluNI	TGGCCA	1 cut(s)	132
MlyI	GAGTC	1 cut(s)	662
MmeI	TCCRAC	2 cut(s)	187, 1145
MnlI	CCTC	6 cut(s)	132, 422, 745, 1086, 1101, 1404
Mox20I	TGGCCA	1 cut(s)	132
Mph1103I	ATGCAT	3 cut(s)	101, 937, 986
MroI	TCCGGA	1 cut(s)	371
MroXI	GAANNNNTTC	1 cut(s)	1487
MscI	TGGCCA	1 cut(s)	132
MslI	CAYNNNNRTG	4 cut(s)	94, 104, 166, 1154
Msp20I	TGGCCA	1 cut(s)	132
MspI	CCGG	3 cut(s)	372, 411, 1382
MspR9I	CCNGG	3 cut(s)	289, 412, 1293
Mva1269I	GAATGC	1 cut(s)	935
MvaI	CCWGG	2 cut(s)	289, 1293
MwoI	GCNNNNNNNGC	5 cut(s)	155, 278, 356, 1427, 1475
NciI	CCSGG	1 cut(s)	412
NcoI	CCATGG	2 cut(s)	216, 940
NdeI	CATATG	1 cut(s)	545
NdeII	GATC	2 cut(s)	374, 393
NlaIII	CATG	7 cut(s)	99, 103, 201, 220, 312, 466, 944
NlaIV	GGNNCC	6 cut(s)	286, 297, 997, 1119, 1297, 1497
NmuCI	GTSAC	1 cut(s)	1024
NsbI	TGCGCA	1 cut(s)	360
NsiI	ATGCAT	3 cut(s)	101, 937, 986
NspI	RCATGY	2 cut(s)	103, 466
NspV	TTCGAA	1 cut(s)	639
PaeR7I	CTCGAG	1 cut(s)	1038
PciSI	GCTCTTC	1 cut(s)	238
PctI	GAATGC	1 cut(s)	935
PdmI	GAANNNNTTC	1 cut(s)	1487
PfeI	GAWTC	2 cut(s)	5, 210
PflMI	CCANNNNNTGG	2 cut(s)	139, 549
PkrI	GCNGC	5 cut(s)	271, 736, 739, 1036, 1161
PleI	GAGTC	1 cut(s)	661
PpsI	GAGTC	1 cut(s)	661
PpuMI	RGGWCCY	3 cut(s)	152, 1295, 1496
PsiI	TTATAA	1 cut(s)	581
Psp124BI	GAGCTC	1 cut(s)	33
Psp5II	RGGWCCY	3 cut(s)	152, 1295, 1496
Psp6I	CCWGG	2 cut(s)	287, 1291
PspEI	GGTNACC	1 cut(s)	1384
PspFI	CCCAGC	1 cut(s)	1227
PspGI	CCWGG	2 cut(s)	287, 1291
PspN4I	GGNNCC	6 cut(s)	286, 297, 997, 1119, 1297, 1497
PspPI	GGNCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
PspPPI	RGGWCCY	3 cut(s)	152, 1295, 1496
PspXI	VCTCGAGB	1 cut(s)	1038
PstI	CTGCAG	1 cut(s)	739
PstNI	CAGNNNCTG	2 cut(s)	155, 1430
RsaI	GTAC	6 cut(s)	118, 495, 558, 883, 1219, 1248
RsaNI	GTAC	6 cut(s)	117, 494, 557, 882, 1218, 1247
RseI	CAYNNNNRTG	4 cut(s)	94, 104, 166, 1154
SacI	GAGCTC	1 cut(s)	33
SapI	GCTCTTC	1 cut(s)	238
SatI	GCNGC	5 cut(s)	270, 735, 738, 1035, 1160
Sau3AI	GATC	2 cut(s)	374, 393
Sau96I	GGNCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
ScaI	AGTACT	1 cut(s)	495
SchI	GAGTC	1 cut(s)	662
ScrFI	CCNGG	3 cut(s)	289, 412, 1293
SduI	GDGCHC	1 cut(s)	33
SfaNI	GCATC	4 cut(s)	449, 721, 922, 1465
SfcI	CTRYAG	2 cut(s)	246, 735
Sfr274I	CTCGAG	1 cut(s)	1038
SfuI	TTCGAA	1 cut(s)	639
SinI	GGWCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
SlaI	CTCGAG	1 cut(s)	1038
SmiMI	CAYNNNNRTG	4 cut(s)	94, 104, 166, 1154
SmlI	CTYRAG	1 cut(s)	1038
SmoI	CTYRAG	1 cut(s)	1038
SpeI	ACTAGT	2 cut(s)	1028, 1450
Sse9I	AATT	6 cut(s)	47, 225, 525, 955, 1182, 1408
SspMI	CTAG	5 cut(s)	669, 798, 1029, 1260, 1451
SstI	GAGCTC	1 cut(s)	33
StyD4I	CCNGG	3 cut(s)	287, 410, 1291
StyI	CCWWGG	2 cut(s)	216, 940
TaaI	ACNGT	3 cut(s)	69, 678, 716
TaqI	TCGA	3 cut(s)	327, 639, 1039
TasI	AATT	6 cut(s)	47, 225, 525, 955, 1182, 1408
TatI	WGTACW	3 cut(s)	493, 881, 1217
TfiI	GAWTC	2 cut(s)	5, 210
TscAI	CASTG	6 cut(s)	72, 111, 118, 702, 822, 1374
TseFI	GTSAC	1 cut(s)	1024
TseI	GCWGC	5 cut(s)	269, 734, 737, 1034, 1159
Tsp45I	GTSAC	1 cut(s)	1024
TspDTI	ATGAA	3 cut(s)	84, 297, 1530
TspRI	CASTG	6 cut(s)	72, 111, 118, 702, 822, 1374
Van91I	CCANNNNNTGG	2 cut(s)	139, 549
VpaK11BI	GGWCC	6 cut(s)	152, 284, 296, 779, 1295, 1496
XapI	RAATTY	3 cut(s)	225, 955, 1408
XceI	RCATGY	2 cut(s)	103, 466
XcmI	CCANNNNNNNNNTGG	1 cut(s)	306
XhoI	CTCGAG	1 cut(s)	1038
XmiI	GTMKAC	1 cut(s)	673
XmnI	GAANNNNTTC	1 cut(s)	1487
XspI	CTAG	5 cut(s)	669, 798, 1029, 1260, 1451
ZrmI	AGTACT	1 cut(s)	495
Zsp2I	ATGCAT	3 cut(s)	101, 937, 986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.