Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009577

Physical Location & Seq

Genomic Coordinates Forward (+)

2296926 .. 2307789

Gene Structure 10864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00158970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGAATTTGACGCCTCGTGCTCCTCCTGCAACTGCTTCAGCTGAAATACATGCTGGAGCTAGTTCAGTTGGGCCCAGCACTTCTTCAGCCCAACCTGGGACAGTCTCGAGTCCAGTTGCAGTTACACCCATCTCTGCCTTCTCTAATCCTTCTCCTATTACGCCTTCGGGATCATTGGTTGCTCCTGGTGTACAGTCTTCCATGGCAACGGGTTCTGTTGGAGTTCAACCTGCCGTGGTGAGTGTGTCCCCACTGCCTGCTTCTAATTTGGGGAGTACTGGAGTTCCTTCTACTTTGGTCAACACCAGTACAAAATCAGTAGGTAATGAAAATCAGGCATCTCAAGATATTGCAAGTTCAATTGATGGAGCTTTTACTCAAGATATTGAGGAAGCGAAGAAAGGAATGGCAGTTGCTGGAAAAGTCAACGTGACTCCTTCAGAGGAGAAAGCAATTGATGATGAGCCATTGGTGTATGCCAGTAAGCAGGAGGCAAAAAATGCATTCAAATCACTCCTGGAATCCGCAAATGTCCACTCTGATTGGACCTGGGAGCAGGCAATGAGAGAGATCATTAATGACAAAAGATATGGAGCTTTAAGAACACTGGGTGAGCGGAAGCAGGCTTTTAATGAGTACTTGGGCCAAAGGAAAAAGTTGGAGAATGAAGAGAGGCGTATAAGGCAGAAAAGGGCTCGGGAAGAATTTACAAAAATGCTGGAAGAGTCCAAGGAACTCACATCAACAATTAGATGGAGCAAAGCTGTAACTATGTTTGAAAATGATGAACGGTTCAAGGCTGTTGAGCGAGCTAGAGATCGGGAAGATCTCTATGAGAGCTACATTGTAGAACTTGAGAGGAAGGAGAAAGAATACGCTGCTGAAGAGCATAGGAGGAATATATCCGAGTACAGGGAATTTCTGGAGTCTTGCGACTTTATTAAGGTGAACAGCCAATGGCGTAAAGTTCAAGATCGCTTAGAGGACGATGAGAGATGCTTGCGTCTTGAAAAGCTTGACCGCTTGCTCATTTTCCAGGACTATATTCGTGACCTTGAGAAGGAGGAAGAGGAGCAAAAGAAGATACAAAAGGAACAATTGAGGCGGATTGAGAGGAAAAACCGGGATGAGTTTCGCAAGCTCCTGGAAGAACATGCTGCTGACGGTACTCTTACAGCTAAAAGTCAGTGGCGCGATTACTGTATGAAGGTCAAAGACTTGCCACAGTACGAAGCTGTTGCATTAAACACATCTGGTTCAACACCAAAAGATTTGTTTGAGGATGTTGCTGAAGAATTAGAGAAACAGTTTTTGGAGGATAAAGCACGGGTAAAGGATGCAATGAAGCAAGGGCAGATTGCAATGGTTTCCTCATGGACATTTGAAGAATTTAAGGCTGCTGTTGTGAAAGATATTGGTTCCCCATCAATTCCAGAGCTTAACTTAAAGCTTGCATACGAGGAGATATTAGAGAGAGCCAAGGAGAAGGAGGAAAAAGAAGCAAAGAAGCGTCAACGACTTGCTGATGACTTCACTAAGCTTTTGCACACATTCAAGGAAATAACTGCTTCTTCTAACTGGGAAGATTGCAAACACCTTTTTGAAGAGACCCAAGAATACAGATCAGTTGGGGACGAGAACTCTGGAAAGGAAGTTTTTGAGGAATATATTACAAGTTTACACGAGAAGGCCAAAGAGAAAGAACGGAAGCGTGAGGAGGAAAAGGCGAAAAAGGAGAAGGAAAGAGAGGAGAAAGAGAAGCGGAAGGATAAGGAGAGAAAGGAGAAGGAGAGAGAACGTGAAAAAGAAAAGGGAAAGGAACGATCTAAGAAGGATGAAACAGATAGTGAAAATGTTGACTTAACTGATAGTCATGACCACAAAGAAGATAAGAAAAGGGAGAAAGACAAAGATAGGAAGCATCGGAAGCGGCATCAAAGTTCTGTTGATGATGTGGGTTCTGACAAGGATGAGAAAGAGGACTCTAAGAAACACAGACATAGTAGTGACCGCAAAAAATCAAGAAAACGAGCATATACACCTGAATCTGACAGTGAAAATCGACACAGAAGACATAAGAGAGAACATCGAGATGGTTCCCGCAGAAATGGTGGATACGAGGAACTTGAAGATGGAGAGGTTGGTGAAGATGGGGAAATTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005685 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006928 GO:0006996 GO:0007010 GO:0008150 GO:0008152 GO:0008360 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0016477 GO:0016592 GO:0016604 GO:0016607 GO:0022603 GO:0022604 GO:0030532 GO:0031974 GO:0031981 GO:0032465 GO:0032991 GO:0034399 GO:0034641 GO:0040011 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051302 GO:0051674 GO:0051726 GO:0065007 GO:0065008 GO:0070013 GO:0070064 GO:0071004 GO:0071010 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

FF WW

Protein Analysis

721

Amino Acids

83.26

Weight (kDa)

5.9

Isoelectric Point (pI)

50.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FF	PF01846	164 - 213	4.2e-17	FF domain
FF	PF01846	231 - 281	5.5e-13	FF domain
FF	PF01846	373 - 428	4e-09	FF domain
FF_PRPF40A	PF25432	436 - 495	5.7e-20	PRPF40A-like, FF domain
FF	PF01846	509 - 556	1.9e-06	FF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44910 AT1G44910
fragaria_vesca	FvH4_2g32680 FvH4_2g32680 FvH4_2g32680 FvH4_2g32680
malus_domestica	MD08G1078500.v1.1 MD15G1065300.v1.1
prunus_persica	Prupe.1G419400_v2.0.a1
pyrus_communis	pycom08g06490 pycom15g06180
rosa_chinensis	RchiOBHm_Chr6g0309991
rosa_laevigata	RLG00000010518
rosa_multiflora	Rmu_sc0000294.1_g000011
rosa_roxburghii	Rroxscaffold_7G00158970
rosa_rugosa	Rorug06G0376700 Rorug06G0376800
rosa_samantha	Rh6AG490400 Rh6BG499900 Rh6CG504800 Rh6DG490800
rosa_wichuraiana	Rw6G042690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	238
AccBSI	CCGCTC	1 cut(s)	616
AccII	CGCG	1 cut(s)	1194
AciI	CCGC	8 cut(s)	525, 616, 1021, 1105, 1762, 1930, 2011, 2101
AclWI	GGATC	1 cut(s)	178
AcsI	RAATTY	5 cut(s)	4, 704, 917, 1388, 2157
AcuI	CTGAAG	5 cut(s)	21, 69, 423, 903, 1311
AcyI	GRCGYC	1 cut(s)	11
AdeI	CACNNNGTG	1 cut(s)	611
AfaI	GTAC	7 cut(s)	192, 277, 310, 638, 911, 1168, 1229
AfiI	CCNNNNNNNGG	3 cut(s)	96, 912, 1060
AjnI	CCWGG	6 cut(s)	94, 184, 516, 548, 1035, 1143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1295, 1327
Alw21I	GWGCWC	1 cut(s)	22
Alw26I	GTCTC	2 cut(s)	109, 1601
AlwI	GGATC	1 cut(s)	178
AlwNI	CAGNNNCTG	1 cut(s)	416
Ama87I	CYCGRG	2 cut(s)	106, 696
AoxI	GGCC	3 cut(s)	71, 643, 1689
ApaI	GGGCCC	1 cut(s)	75
ApeKI	GCWGC	3 cut(s)	878, 1157, 1397
ApoI	RAATTY	5 cut(s)	4, 704, 917, 1388, 2157
AseI	ATTAAT	1 cut(s)	576
AspLEI	GCGC	1 cut(s)	1194
AspS9I	GGNCC	4 cut(s)	71, 72, 546, 643
AsuC2I	CCSGG	1 cut(s)	1124
AsuHPI	GGTGA	4 cut(s)	250, 623, 958, 2156
AvaI	CYCGRG	2 cut(s)	106, 696
AvaII	GGWCC	1 cut(s)	546
BaeGI	GKGCMC	1 cut(s)	75
BanII	GRGCYC	2 cut(s)	75, 697
BauI	CACGAG	2 cut(s)	15, 1682
BbsI	GAAGAC	2 cut(s)	189, 2077
Bbv12I	GWGCWC	1 cut(s)	22
BbvI	GCAGC	3 cut(s)	865, 1144, 1384
BccI	CCATC	7 cut(s)	137, 359, 747, 1432, 2087, 2126, 2144
BceAI	ACGGC	1 cut(s)	218
BcgI	CGANNNNNNTGC	2 cut(s)	1220, 1254
BciT130I	CCWGG	6 cut(s)	96, 186, 518, 550, 1037, 1145
BciVI	GTATCC	1 cut(s)	2108
BcnI	CCSGG	1 cut(s)	1124
BcoDI	GTCTC	2 cut(s)	109, 1601
BfaI	CTAG	2 cut(s)	60, 813
BfuAI	ACCTGC	1 cut(s)	238
BfuI	GTATCC	1 cut(s)	2108
BglII	AGATCT	1 cut(s)	826
BisI	GCNGC	4 cut(s)	879, 1158, 1398, 1931
BlsI	GCNGC	4 cut(s)	880, 1159, 1399, 1932
BmcAI	AGTACT	2 cut(s)	277, 638
Bme1390I	CCNGG	7 cut(s)	96, 186, 518, 550, 1037, 1124, 1145
Bme18I	GGWCC	1 cut(s)	546
BmeT110I	CYCGRG	2 cut(s)	106, 696
BmgT120I	GGNCC	4 cut(s)	71, 72, 546, 643
BmiI	GGNNCC	3 cut(s)	73, 1420, 2098
BmrFI	CCNGG	7 cut(s)	96, 186, 518, 550, 1037, 1124, 1145
BmrI	ACTGGG	2 cut(s)	617, 1588
BmsI	GCATC	5 cut(s)	347, 986, 1327, 1930, 1942
BmuI	ACTGGG	2 cut(s)	617, 1588
BpiI	GAAGAC	2 cut(s)	189, 2077
BpmI	CTGGAG	3 cut(s)	75, 300, 944
BpuEI	CTTGAG	4 cut(s)	327, 363, 875, 1076
BpuMI	CCSGG	1 cut(s)	1124
BsaHI	GRCGYC	1 cut(s)	11
BsaI	GGTCTC	1 cut(s)	1601
BsaJI	CCNNGG	6 cut(s)	95, 201, 234, 549, 729, 1479
Bsc4I	CCNNNNNNNGG	3 cut(s)	96, 912, 1060
Bse1I	ACTGG	6 cut(s)	113, 283, 306, 480, 612, 1583
Bse3DI	GCAATG	3 cut(s)	567, 1347, 1368
BseBI	CCWGG	6 cut(s)	96, 186, 518, 550, 1037, 1145
BseDI	CCNNGG	6 cut(s)	95, 201, 234, 549, 729, 1479
BseGI	GGATG	5 cut(s)	1132, 1288, 1342, 1840, 1975
BseLI	CCNNNNNNNGG	3 cut(s)	96, 912, 1060
BseMI	GCAATG	3 cut(s)	567, 1347, 1368
BseNI	ACTGG	6 cut(s)	113, 283, 306, 480, 612, 1583
BseRI	GAGGAG	6 cut(s)	12, 458, 1085, 1475, 1730, 1763
BseSI	GKGCMC	1 cut(s)	75
BseXI	GCAGC	3 cut(s)	865, 1144, 1384
BseYI	CCCAGC	1 cut(s)	74
Bsh1236I	CGCG	1 cut(s)	1194
BshFI	GGCC	3 cut(s)	73, 645, 1691
BsiHKAI	GWGCWC	1 cut(s)	22
BsiHKCI	CYCGRG	2 cut(s)	106, 696
BsiSI	CCGG	1 cut(s)	1123
BslFI	GGGAC	3 cut(s)	112, 232, 1646
BslI	CCNNNNNNNGG	3 cut(s)	96, 912, 1060
BsmAI	GTCTC	2 cut(s)	109, 1601
BsmFI	GGGAC	3 cut(s)	112, 232, 1646
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	3 cut(s)	73, 645, 1691
Bso31I	GGTCTC	1 cut(s)	1601
BsoBI	CYCGRG	2 cut(s)	106, 696
Bsp120I	GGGCCC	1 cut(s)	71
Bsp1286I	GDGCHC	3 cut(s)	22, 75, 697
Bsp1407I	TGTACA	1 cut(s)	190
Bsp143I	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
Bsp19I	CCATGG	1 cut(s)	201
BspACI	CCGC	8 cut(s)	525, 616, 1021, 1105, 1762, 1930, 2011, 2101
BspANI	GGCC	3 cut(s)	73, 645, 1691
BspFNI	CGCG	1 cut(s)	1194
BspHI	TCATGA	1 cut(s)	1873
BspLI	GGNNCC	3 cut(s)	73, 1420, 2098
BspMI	ACCTGC	1 cut(s)	238
BspPI	GGATC	1 cut(s)	178
BspQI	GCTCTTC	1 cut(s)	879
BspTNI	GGTCTC	1 cut(s)	1601
BsrBI	CCGCTC	1 cut(s)	616
BsrDI	GCAATG	3 cut(s)	567, 1347, 1368
BsrGI	TGTACA	1 cut(s)	190
BsrI	ACTGG	6 cut(s)	113, 283, 306, 480, 612, 1583
BssECI	CCNNGG	6 cut(s)	95, 201, 234, 549, 729, 1479
BssMI	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	2 cut(s)	15, 1682
BssT1I	CCWWGG	3 cut(s)	201, 729, 1479
Bst2BI	CACGAG	2 cut(s)	15, 1682
Bst2UI	CCWGG	6 cut(s)	96, 186, 518, 550, 1037, 1145
Bst4CI	ACNGT	8 cut(s)	103, 195, 792, 1166, 1202, 1227, 1308, 2054
Bst6I	CTCTTC	5 cut(s)	663, 717, 879, 1062, 1599
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	1 cut(s)	500
BstAUI	TGTACA	1 cut(s)	190
BstC8I	GCNNGC	8 cut(s)	258, 558, 624, 810, 1001, 1025, 1139, 1452
BstDEI	CTNAG	4 cut(s)	979, 1536, 1827, 1986
BstDSI	CCRYGG	2 cut(s)	201, 234
BstENI	CCTNNNNNAGG	1 cut(s)	1058
BstF5I	GGATG	5 cut(s)	1132, 1288, 1342, 1840, 1975
BstFNI	CGCG	1 cut(s)	1194
BstHHI	GCGC	1 cut(s)	1194
BstKTI	GATC	7 cut(s)	173, 573, 820, 829, 976, 1625, 1826
BstMAI	GTCTC	2 cut(s)	109, 1601
BstMBI	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
BstMWI	GCNNNNNNNGC	4 cut(s)	26, 500, 682, 1927
BstNI	CCWGG	6 cut(s)	96, 186, 518, 550, 1037, 1145
BstNSI	RCATGY	2 cut(s)	53, 1157
BstSCI	CCNGG	7 cut(s)	94, 184, 516, 548, 1035, 1122, 1143
BstSLI	GKGCMC	1 cut(s)	75
BstUI	CGCG	1 cut(s)	1194
BstV1I	GCAGC	3 cut(s)	865, 1144, 1384
BstV2I	GAAGAC	2 cut(s)	189, 2077
BstX2I	RGATCY	1 cut(s)	826
BstYI	RGATCY	1 cut(s)	826
BsuI	GTATCC	1 cut(s)	2108
BsuRI	GGCC	3 cut(s)	73, 645, 1691
BtgI	CCRYGG	2 cut(s)	201, 234
BtsCI	GGATG	5 cut(s)	1132, 1288, 1342, 1840, 1975
BtsI	GCAGTG	1 cut(s)	251
BtsIMutI	CAGTG	4 cut(s)	251, 605, 1193, 2059
BveI	ACCTGC	1 cut(s)	238
Cac8I	GCNNGC	8 cut(s)	258, 558, 624, 810, 1001, 1025, 1139, 1452
CaiI	CAGNNNCTG	1 cut(s)	416
CciI	TCATGA	1 cut(s)	1873
CfoI	GCGC	1 cut(s)	1194
Cfr13I	GGNCC	4 cut(s)	71, 72, 546, 643
CseI	GACGC	3 cut(s)	19, 992, 1499
Csp6I	GTAC	7 cut(s)	191, 276, 309, 637, 910, 1167, 1228
CspCI	CAANNNNNGTGG	2 cut(s)	524, 559
CviAII	CATG	5 cut(s)	50, 202, 1154, 1374, 1874
CviQI	GTAC	7 cut(s)	191, 276, 309, 637, 910, 1167, 1228
DdeI	CTNAG	4 cut(s)	979, 1536, 1827, 1986
DpnI	GATC	7 cut(s)	172, 572, 819, 828, 975, 1624, 1825
DpnII	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
DraIII	CACNNNGTG	1 cut(s)	611
Eam1104I	CTCTTC	5 cut(s)	663, 717, 879, 1062, 1599
EarI	CTCTTC	5 cut(s)	663, 717, 879, 1062, 1599
EciI	GGCGGA	1 cut(s)	1120
Eco130I	CCWWGG	3 cut(s)	201, 729, 1479
Eco24I	GRGCYC	2 cut(s)	75, 697
Eco31I	GGTCTC	1 cut(s)	1601
Eco47I	GGWCC	1 cut(s)	546
Eco57I	CTGAAG	5 cut(s)	21, 69, 423, 903, 1311
Eco88I	CYCGRG	2 cut(s)	106, 696
EcoNI	CCTNNNNNAGG	1 cut(s)	1058
EcoRII	CCWGG	6 cut(s)	94, 184, 516, 548, 1035, 1143
EcoT14I	CCWWGG	3 cut(s)	201, 729, 1479
EcoT22I	ATGCAT	1 cut(s)	505
EcoT38I	GRGCYC	2 cut(s)	75, 697
ErhI	CCWWGG	3 cut(s)	201, 729, 1479
FaeI	CATG	5 cut(s)	53, 205, 1157, 1377, 1877
FaqI	GGGAC	3 cut(s)	112, 232, 1646
FatI	CATG	5 cut(s)	49, 201, 1153, 1373, 1873
FauI	CCCGC	1 cut(s)	2108
Fnu4HI	GCNGC	4 cut(s)	879, 1158, 1398, 1931
FokI	GGATG	5 cut(s)	1139, 1295, 1349, 1847, 1982
FriOI	GRGCYC	2 cut(s)	75, 697
Fsp4HI	GCNGC	4 cut(s)	879, 1158, 1398, 1931
FspBI	CTAG	2 cut(s)	60, 813
GlaI	GCGC	1 cut(s)	1193
GluI	GCNGC	4 cut(s)	879, 1158, 1398, 1931
GsaI	CCCAGC	1 cut(s)	78
GsuI	CTGGAG	3 cut(s)	75, 300, 944
HaeIII	GGCC	3 cut(s)	73, 645, 1691
HapII	CCGG	1 cut(s)	1123
HgaI	GACGC	3 cut(s)	19, 992, 1499
HhaI	GCGC	1 cut(s)	1194
Hin1I	GRCGYC	1 cut(s)	11
Hin1II	CATG	5 cut(s)	53, 205, 1157, 1377, 1877
Hin6I	GCGC	1 cut(s)	1192
HinP1I	GCGC	1 cut(s)	1192
HincII	GTYRAC	4 cut(s)	301, 427, 1514, 1858
HindII	GTYRAC	4 cut(s)	301, 427, 1514, 1858
HindIII	AAGCTT	3 cut(s)	1013, 1448, 1538
HinfI	GANTC	7 cut(s)	109, 433, 521, 725, 926, 1982, 2045
HpaII	CCGG	1 cut(s)	1123
HphI	GGTGA	4 cut(s)	250, 623, 958, 2156
Hpy166II	GTNNAC	8 cut(s)	191, 301, 427, 535, 949, 1514, 1679, 1858
Hpy188I	TCNGA	6 cut(s)	442, 541, 907, 1926, 1963, 2050
Hpy8I	GTNNAC	8 cut(s)	191, 301, 427, 535, 949, 1514, 1679, 1858
HpyCH4III	ACNGT	8 cut(s)	103, 195, 792, 1166, 1202, 1227, 1308, 2054
HpyCH4IV	ACGT	2 cut(s)	429, 1798
HpyF10VI	GCNNNNNNNGC	4 cut(s)	26, 500, 682, 1927
HpyF3I	CTNAG	4 cut(s)	979, 1536, 1827, 1986
HpySE526I	ACGT	2 cut(s)	429, 1798
Hsp92I	GRCGYC	1 cut(s)	11
Hsp92II	CATG	5 cut(s)	53, 205, 1157, 1377, 1877
HspAI	GCGC	1 cut(s)	1192
Kzo9I	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
LguI	GCTCTTC	1 cut(s)	879
LmnI	GCTCC	9 cut(s)	25, 56, 187, 368, 553, 593, 756, 1072, 1146
Lsp1109I	GCAGC	3 cut(s)	865, 1144, 1384
LweI	GCATC	5 cut(s)	347, 986, 1327, 1930, 1942
MaeI	CTAG	2 cut(s)	60, 813
MaeII	ACGT	2 cut(s)	429, 1798
MaeIII	GTNAC	5 cut(s)	121, 430, 766, 1049, 2006
MalI	GATC	7 cut(s)	172, 572, 819, 828, 975, 1624, 1825
MbiI	CCGCTC	1 cut(s)	616
MboI	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
MfeI	CAATTG	3 cut(s)	360, 453, 1097
MflI	RGATCY	1 cut(s)	826
MhlI	GDGCHC	3 cut(s)	22, 75, 697
MlyI	GAGTC	5 cut(s)	118, 427, 734, 935, 1976
MmeI	TCCRAC	2 cut(s)	199, 639
Mph1103I	ATGCAT	1 cut(s)	505
MseI	TTAA	9 cut(s)	576, 599, 630, 942, 1244, 1392, 1440, 1445, 1862
MslI	CAYNNNNRTG	2 cut(s)	2004, 2091
MspA1I	CMGCKG	1 cut(s)	41
MspI	CCGG	1 cut(s)	1123
MspR9I	CCNGG	7 cut(s)	96, 186, 518, 550, 1037, 1124, 1145
MunI	CAATTG	3 cut(s)	360, 453, 1097
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	6 cut(s)	96, 186, 518, 550, 1037, 1145
MvnI	CGCG	1 cut(s)	1194
MwoI	GCNNNNNNNGC	4 cut(s)	26, 500, 682, 1927
NciI	CCSGG	1 cut(s)	1124
NcoI	CCATGG	1 cut(s)	201
NdeII	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
NlaIII	CATG	5 cut(s)	53, 205, 1157, 1377, 1877
NlaIV	GGNNCC	3 cut(s)	73, 1420, 2098
NmuCI	GTSAC	3 cut(s)	430, 1049, 2006
NsiI	ATGCAT	1 cut(s)	505
NspI	RCATGY	2 cut(s)	53, 1157
PaeR7I	CTCGAG	1 cut(s)	106
PagI	TCATGA	1 cut(s)	1873
PciSI	GCTCTTC	1 cut(s)	879
PctI	GAATGC	1 cut(s)	503
PfeI	GAWTC	2 cut(s)	521, 2045
PfoI	TCCNGGA	3 cut(s)	516, 1035, 1143
PkrI	GCNGC	4 cut(s)	880, 1159, 1399, 1932
PleI	GAGTC	5 cut(s)	117, 427, 733, 934, 1976
PpsI	GAGTC	5 cut(s)	117, 427, 733, 934, 1976
PshBI	ATTAAT	1 cut(s)	576
Psp6I	CCWGG	6 cut(s)	94, 184, 516, 548, 1035, 1143
PspFI	CCCAGC	1 cut(s)	74
PspGI	CCWGG	6 cut(s)	94, 184, 516, 548, 1035, 1143
PspN4I	GGNNCC	3 cut(s)	73, 1420, 2098
PspOMI	GGGCCC	1 cut(s)	71
PspPI	GGNCC	4 cut(s)	71, 72, 546, 643
PstNI	CAGNNNCTG	1 cut(s)	416
PsuI	RGATCY	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	41
RsaI	GTAC	7 cut(s)	192, 277, 310, 638, 911, 1168, 1229
RsaNI	GTAC	7 cut(s)	191, 276, 309, 637, 910, 1167, 1228
RseI	CAYNNNNRTG	2 cut(s)	2004, 2091
SapI	GCTCTTC	1 cut(s)	879
SaqAI	TTAA	9 cut(s)	576, 599, 630, 942, 1244, 1392, 1440, 1445, 1862
SatI	GCNGC	4 cut(s)	879, 1158, 1398, 1931
Sau3AI	GATC	7 cut(s)	170, 570, 817, 826, 973, 1622, 1823
Sau96I	GGNCC	4 cut(s)	71, 72, 546, 643
ScaI	AGTACT	2 cut(s)	277, 638
SchI	GAGTC	5 cut(s)	118, 427, 734, 935, 1976
ScrFI	CCNGG	7 cut(s)	96, 186, 518, 550, 1037, 1124, 1145
SduI	GDGCHC	3 cut(s)	22, 75, 697
SfaNI	GCATC	5 cut(s)	347, 986, 1327, 1930, 1942
Sfr274I	CTCGAG	1 cut(s)	106
SinI	GGWCC	1 cut(s)	546
SlaI	CTCGAG	1 cut(s)	106
SmiMI	CAYNNNNRTG	2 cut(s)	2004, 2091
SmlI	CTYRAG	5 cut(s)	106, 342, 378, 854, 1055
SmoI	CTYRAG	5 cut(s)	106, 342, 378, 854, 1055
SsiI	CCGC	8 cut(s)	525, 616, 1021, 1105, 1762, 1930, 2011, 2101
SspMI	CTAG	2 cut(s)	60, 813
StyD4I	CCNGG	7 cut(s)	94, 184, 516, 548, 1035, 1122, 1143
StyI	CCWWGG	3 cut(s)	201, 729, 1479
TaaI	ACNGT	8 cut(s)	103, 195, 792, 1166, 1202, 1227, 1308, 2054
TaiI	ACGT	2 cut(s)	432, 1801
TaqI	TCGA	3 cut(s)	107, 2062, 2089
TatI	WGTACW	5 cut(s)	190, 275, 308, 636, 909
TauI	GCSGC	1 cut(s)	1933
TfiI	GAWTC	2 cut(s)	521, 2045
Tru1I	TTAA	9 cut(s)	576, 599, 630, 942, 1244, 1392, 1440, 1445, 1862
Tru9I	TTAA	9 cut(s)	576, 599, 630, 942, 1244, 1392, 1440, 1445, 1862
TscAI	CASTG	4 cut(s)	258, 612, 1193, 2059
TseFI	GTSAC	3 cut(s)	430, 1049, 2006
TseI	GCWGC	3 cut(s)	878, 1157, 1397
Tsp45I	GTSAC	3 cut(s)	430, 1049, 2006
TspDTI	ATGAA	7 cut(s)	17, 342, 681, 801, 1220, 1358, 1851
TspGWI	ACGGA	1 cut(s)	1720
TspRI	CASTG	4 cut(s)	258, 612, 1193, 2059
VpaK11BI	GGWCC	1 cut(s)	546
VspI	ATTAAT	1 cut(s)	576
XagI	CCTNNNNNAGG	1 cut(s)	1058
XapI	RAATTY	5 cut(s)	4, 704, 917, 1388, 2157
XceI	RCATGY	2 cut(s)	53, 1157
XhoI	CTCGAG	1 cut(s)	106
XspI	CTAG	2 cut(s)	60, 813
ZrmI	AGTACT	2 cut(s)	277, 638
Zsp2I	ATGCAT	1 cut(s)	505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.