Prupe.1G441300_v2.0.a1

Protein of unknown function (DUF1645)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015304
Physical Location & Seq
Forward (+)
37474346 .. 37475712
1367 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G441300.1

Sequence Viewer

Length: 1047 bp
ATGGAGGTGGTGATACCAACCAGAACAGCCATGGATTTCGACTTCAATAGCGCCCGATCTTCGCCATGTGTGACGGCTCCTTCGACGCCAAGGCGGTTCGGGGAGTTCTACATGAGTGCACCAACAAGCCCAACTAGGATGTCTGACTTTTACAGGGAGTTTGAAGAGTTCTCCAACAGCAATTGGGAAGATGATGAGCCGCCAACTCATGAAGGAGCCACACCAAAATCTCCCAAATCGCCTAAGGATGAGTTTGGCTTTGAGGACTTCGCATTTGATGTTAGTGAGGAGGTGGAAAGAACTTCTCTCTCAGCTGAAGAGCTTTTCGATGGCGGCGTTATCCGACCCTTTAAGCCTCCTCCTGCAACTAACACCCCGAGAACTCCATCCTTTTTCCGTCAAGTTCTTTCGCCTAGATGGAAAAAGGGTAAAGACCATCCACTTGGGCCGTCGTCCACGACCCAAATGGACAACACCACAAAGAGAAGTGATCAGCACCAAAGAGGAAGAGACAGAACTCCTGCAGCCTTGTCATCCTCTGTTTCGGGCCATAGAGCAACAAGGTCCCTATCTCCTTTGAGGGTTTCGGAGTATCAATGGGAAGAAGAAGAAAAACAACAGCAACAGCAGCAACAACAAAACAACAGACAGTTAGCTCCAAAAGCCATGTTTTCTCCCTCTGCTGCTGCTTCAGCTTCAAAGGCTTCAAAGAAATGGAAACTGAGAGACTTTCTGCTGTTTCGAAGCGCATCAGAAGGAAGAGCAACAGATAAAGATCCATTCCGAAAGTACTCAAATCTGTTCAAGAAAAACGAAGATGTCAAGAACTCCAGCTTCAGGTCCATAGACAGCCCGGCGGCCACGAGCTCAAGAAGAAGAGGGCCAGTTTCAGCTCATGAGTTGCATTACACTATGAACAAAGCAGTGTCTAATGATATGAAGAAGAAGACCTTCTTGCCTTACAAGCAAGGCATTTTGGGTCGATTGGCCTTCAATCCTGCTGTCAGTGCACTTGCCAATGGCTTTGGGTCTCTTTCACGGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1645

Protein Analysis

349

Amino Acids

39.2

Weight (kDa)

9.64

Isoelectric Point (pI)

68.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26530 AT2G26530
fragaria_vesca FvH4_2g34940
malus_domestica MD08G1106900.v1.1 MD15G1087600.v1.1
prunus_persica Prupe.1G441300_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0307061
rosa_laevigata RLG00000010737
rosa_multiflora Rmu_sc0005634.1_g000005
rosa_roxburghii Rroxscaffold_7G00161190
rosa_rugosa Rorug06G0355600
rosa_samantha Rh6AG467100 Rh6BG433400 Rh6CG482600 Rh6DG468900
rosa_wichuraiana Rw6G040720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 94, 200, 333, 857
AclWI GGATC 1 cut(s) 770
AcoI YGGCCR 1 cut(s) 858
AcuI CTGAAG 3 cut(s) 336, 675, 820
AcyI GRCGYC 1 cut(s) 86
AfaI GTAC 1 cut(s) 791
AfiI CCNNNNNNNGG 1 cut(s) 837
AgsI TTSAA 6 cut(s) 46, 164, 699, 708, 805, 994
AluBI AGCT 7 cut(s) 314, 322, 656, 695, 834, 867, 893
AluI AGCT 7 cut(s) 314, 322, 656, 695, 834, 867, 893
Alw21I GWGCWC 3 cut(s) 121, 869, 1012
Alw26I GTCTC 3 cut(s) 504, 720, 1035
Alw44I GTGCAC 2 cut(s) 117, 1008
AlwI GGATC 1 cut(s) 770
Ama87I CYCGRG 1 cut(s) 376
AoxI GGCC 5 cut(s) 446, 547, 858, 881, 987
ApaLI GTGCAC 2 cut(s) 117, 1008
ApeKI GCWGC 4 cut(s) 524, 628, 683, 686
ArsI GACNNNNNNTTYG 4 cut(s) 64, 96, 257, 289
Asp700I GAANNNNTTC 1 cut(s) 950
AspLEI GCGC 2 cut(s) 53, 749
AspS9I GGNCC 6 cut(s) 446, 547, 564, 840, 881, 1041
AsuC2I CCSGG 1 cut(s) 854
AsuHPI GGTGA 1 cut(s) 22
AsuII TTCGAA 1 cut(s) 742
AvaI CYCGRG 1 cut(s) 376
AvaII GGWCC 3 cut(s) 564, 840, 1041
AxyI CCTNAGG 1 cut(s) 243
BaeGI GKGCMC 2 cut(s) 121, 1012
BanII GRGCYC 1 cut(s) 869
BauI CACGAG 1 cut(s) 862
BbsI GAAGAC 1 cut(s) 953
Bbv12I GWGCWC 3 cut(s) 121, 869, 1012
BbvI GCAGC 4 cut(s) 536, 640, 670, 673
BccI CCATC 4 cut(s) 323, 394, 411, 444
BceAI ACGGC 2 cut(s) 90, 433
BclI TGATCA 1 cut(s) 490
BcnI CCSGG 1 cut(s) 854
BcoDI GTCTC 3 cut(s) 504, 720, 1035
BfaI CTAG 2 cut(s) 135, 414
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 1 cut(s) 54
BisI GCNGC 7 cut(s) 200, 334, 525, 629, 684, 687, 858
BlsI GCNGC 7 cut(s) 201, 335, 526, 630, 685, 688, 859
BmcAI AGTACT 1 cut(s) 791
Bme1390I CCNGG 1 cut(s) 854
Bme18I GGWCC 3 cut(s) 564, 840, 1041
BmeT110I CYCGRG 1 cut(s) 376
BmgT120I GGNCC 6 cut(s) 446, 547, 564, 840, 881, 1041
BmiI GGNNCC 3 cut(s) 78, 217, 566
BmrFI CCNGG 1 cut(s) 854
BmsI GCATC 1 cut(s) 758
BpiI GAAGAC 1 cut(s) 953
BpmI CTGGAG 1 cut(s) 814
Bpu14I TTCGAA 1 cut(s) 742
BpuEI CTTGAG 1 cut(s) 853
BpuMI CCSGG 1 cut(s) 854
BsaBI GATNNNNATC 1 cut(s) 774
BsaHI GRCGYC 1 cut(s) 86
BsaI GGTCTC 1 cut(s) 1035
BsaJI CCNNGG 2 cut(s) 30, 89
Bsc4I CCNNNNNNNGG 1 cut(s) 837
Bse1I ACTGG 1 cut(s) 884
Bse21I CCTNAGG 1 cut(s) 243
Bse8I GATNNNNATC 1 cut(s) 774
BseDI CCNNGG 2 cut(s) 30, 89
BseGI GGATG 5 cut(s) 144, 253, 386, 436, 533
BseJI GATNNNNATC 1 cut(s) 774
BseLI CCNNNNNNNGG 1 cut(s) 837
BseMII CTCAG 2 cut(s) 324, 713
BseNI ACTGG 1 cut(s) 884
BseRI GAGGAG 2 cut(s) 302, 348
BseSI GKGCMC 2 cut(s) 121, 1012
BseXI GCAGC 4 cut(s) 536, 640, 670, 673
BshFI GGCC 5 cut(s) 448, 549, 860, 883, 989
BsiHKAI GWGCWC 3 cut(s) 121, 869, 1012
BsiHKCI CYCGRG 1 cut(s) 376
BsiSI CCGG 1 cut(s) 854
BslFI GGGAC 1 cut(s) 550
BslI CCNNNNNNNGG 1 cut(s) 837
BsmAI GTCTC 3 cut(s) 504, 720, 1035
BsmFI GGGAC 1 cut(s) 550
BsnI GGCC 5 cut(s) 448, 549, 860, 883, 989
Bso31I GGTCTC 1 cut(s) 1035
BsoBI CYCGRG 1 cut(s) 376
Bsp119I TTCGAA 1 cut(s) 742
Bsp1286I GDGCHC 3 cut(s) 121, 869, 1012
Bsp143I GATC 3 cut(s) 56, 490, 775
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 4 cut(s) 94, 200, 333, 857
BspANI GGCC 5 cut(s) 448, 549, 860, 883, 989
BspCNI CTCAG 2 cut(s) 323, 714
BspHI TCATGA 2 cut(s) 208, 895
BspLI GGNNCC 3 cut(s) 78, 217, 566
BspMAI CTGCAG 1 cut(s) 526
BspPI GGATC 1 cut(s) 770
BspQI GCTCTTC 2 cut(s) 312, 754
BspT104I TTCGAA 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 1035
BsrI ACTGG 1 cut(s) 884
BssECI CCNNGG 2 cut(s) 30, 89
BssMI GATC 3 cut(s) 56, 490, 775
BssNI GRCGYC 1 cut(s) 86
BssSI CACGAG 1 cut(s) 862
BssT1I CCWWGG 2 cut(s) 30, 89
Bst2BI CACGAG 1 cut(s) 862
Bst4CI ACNGT 2 cut(s) 651, 1041
Bst6I CTCTTC 5 cut(s) 159, 312, 502, 754, 871
BstACI GRCGYC 1 cut(s) 86
BstBI TTCGAA 1 cut(s) 742
BstDEI CTNAG 3 cut(s) 243, 310, 722
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 5 cut(s) 144, 253, 386, 436, 533
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 2 cut(s) 53, 749
BstKTI GATC 3 cut(s) 59, 493, 778
BstMAI GTCTC 3 cut(s) 504, 720, 1035
BstMBI GATC 3 cut(s) 56, 490, 775
BstMWI GCNNNNNNNGC 6 cut(s) 628, 662, 692, 701, 964, 1007
BstSCI CCNGG 1 cut(s) 852
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 2 cut(s) 121, 1012
BstV1I GCAGC 4 cut(s) 536, 640, 670, 673
BstV2I GAAGAC 1 cut(s) 953
BstX2I RGATCY 1 cut(s) 775
BstXI CCANNNNNNTGG 1 cut(s) 443
BstYI RGATCY 1 cut(s) 775
Bsu36I CCTNAGG 1 cut(s) 243
BsuRI GGCC 5 cut(s) 448, 549, 860, 883, 989
BtgI CCRYGG 1 cut(s) 30
BtsCI GGATG 5 cut(s) 144, 253, 386, 436, 533
BtsI GCAGTG 1 cut(s) 930
BtsIMutI CAGTG 2 cut(s) 930, 1012
CciI TCATGA 2 cut(s) 208, 895
CfoI GCGC 2 cut(s) 53, 749
Cfr13I GGNCC 6 cut(s) 446, 547, 564, 840, 881, 1041
CseI GACGC 1 cut(s) 94
Csp6I GTAC 1 cut(s) 790
CviAII CATG 6 cut(s) 31, 66, 112, 209, 667, 896
CviQI GTAC 1 cut(s) 790
DdeI CTNAG 3 cut(s) 243, 310, 722
DpnI GATC 3 cut(s) 58, 492, 777
DpnII GATC 3 cut(s) 56, 490, 775
EaeI YGGCCR 1 cut(s) 858
Eam1104I CTCTTC 5 cut(s) 159, 312, 502, 754, 871
EarI CTCTTC 5 cut(s) 159, 312, 502, 754, 871
Ecl136II GAGCTC 1 cut(s) 867
Eco130I CCWWGG 2 cut(s) 30, 89
Eco24I GRGCYC 1 cut(s) 869
Eco31I GGTCTC 1 cut(s) 1035
Eco47I GGWCC 3 cut(s) 564, 840, 1041
Eco53kI GAGCTC 1 cut(s) 867
Eco57I CTGAAG 3 cut(s) 336, 675, 820
Eco81I CCTNAGG 1 cut(s) 243
Eco88I CYCGRG 1 cut(s) 376
EcoICRI GAGCTC 1 cut(s) 867
EcoO109I RGGNCCY 1 cut(s) 564
EcoT14I CCWWGG 2 cut(s) 30, 89
EcoT38I GRGCYC 1 cut(s) 869
ErhI CCWWGG 2 cut(s) 30, 89
FaeI CATG 6 cut(s) 34, 69, 115, 212, 670, 899
FalI AAGNNNNNCTT 4 cut(s) 935, 967, 938, 970
FaqI GGGAC 1 cut(s) 550
FatI CATG 6 cut(s) 30, 65, 111, 208, 666, 895
FbaI TGATCA 1 cut(s) 490
Fnu4HI GCNGC 7 cut(s) 200, 334, 525, 629, 684, 687, 858
FokI GGATG 5 cut(s) 151, 260, 373, 423, 520
FriOI GRGCYC 1 cut(s) 869
Fsp4HI GCNGC 7 cut(s) 200, 334, 525, 629, 684, 687, 858
FspBI CTAG 2 cut(s) 135, 414
GlaI GCGC 2 cut(s) 52, 748
GluI GCNGC 7 cut(s) 200, 334, 525, 629, 684, 687, 858
GsuI CTGGAG 1 cut(s) 814
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 5 cut(s) 448, 549, 860, 883, 989
HapII CCGG 1 cut(s) 854
HgaI GACGC 1 cut(s) 94
HhaI GCGC 2 cut(s) 53, 749
Hin1I GRCGYC 1 cut(s) 86
Hin1II CATG 6 cut(s) 34, 69, 115, 212, 670, 899
Hin6I GCGC 2 cut(s) 51, 747
HinP1I GCGC 2 cut(s) 51, 747
HpaII CCGG 1 cut(s) 854
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 3 cut(s) 119, 456, 1010
Hpy188I TCNGA 5 cut(s) 145, 344, 589, 754, 785
Hpy188III TCNNGA 6 cut(s) 209, 805, 823, 870, 896, 1044
Hpy8I GTNNAC 3 cut(s) 119, 456, 1010
Hpy99I CGWCG 2 cut(s) 88, 454
HpyAV CCTTC 5 cut(s) 90, 206, 749, 961, 1000
HpyCH4III ACNGT 2 cut(s) 651, 1041
HpyCH4V TGCA 5 cut(s) 119, 365, 524, 904, 1010
HpyF10VI GCNNNNNNNGC 6 cut(s) 628, 662, 692, 701, 964, 1007
HpyF3I CTNAG 3 cut(s) 243, 310, 722
Hsp92I GRCGYC 1 cut(s) 86
Hsp92II CATG 6 cut(s) 34, 69, 115, 212, 670, 899
HspAI GCGC 2 cut(s) 51, 747
Ksp22I TGATCA 1 cut(s) 490
Kzo9I GATC 3 cut(s) 56, 490, 775
LguI GCTCTTC 2 cut(s) 312, 754
LmnI GCTCC 3 cut(s) 82, 215, 661
LpnPI CCDG 9 cut(s) 34, 139, 375, 534, 823, 844, 867, 897, 1011
Lsp1109I GCAGC 4 cut(s) 536, 640, 670, 673
LweI GCATC 1 cut(s) 758
MaeI CTAG 2 cut(s) 135, 414
MaeIII GTNAC 1 cut(s) 70
MalI GATC 3 cut(s) 58, 492, 777
MboI GATC 3 cut(s) 56, 490, 775
MfeI CAATTG 1 cut(s) 181
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 3 cut(s) 121, 869, 1012
MluCI AATT 1 cut(s) 181
MmeI TCCRAC 2 cut(s) 198, 367
MroXI GAANNNNTTC 1 cut(s) 950
MseI TTAA 1 cut(s) 351
MspA1I CMGCKG 1 cut(s) 314
MspI CCGG 1 cut(s) 854
MspR9I CCNGG 1 cut(s) 854
MunI CAATTG 1 cut(s) 181
MwoI GCNNNNNNNGC 6 cut(s) 628, 662, 692, 701, 964, 1007
NciI CCSGG 1 cut(s) 854
NcoI CCATGG 1 cut(s) 30
NdeII GATC 3 cut(s) 56, 490, 775
NlaIII CATG 6 cut(s) 34, 69, 115, 212, 670, 899
NlaIV GGNNCC 3 cut(s) 78, 217, 566
NmuCI GTSAC 1 cut(s) 70
NspV TTCGAA 1 cut(s) 742
PagI TCATGA 2 cut(s) 208, 895
PciSI GCTCTTC 2 cut(s) 312, 754
PcsI WCGNNNNNNNCGW 2 cut(s) 80, 333
PdmI GAANNNNTTC 1 cut(s) 950
PkrI GCNGC 7 cut(s) 201, 335, 526, 630, 685, 688, 859
PpuMI RGGWCCY 1 cut(s) 564
Psp124BI GAGCTC 1 cut(s) 869
Psp5II RGGWCCY 1 cut(s) 564
PspN4I GGNNCC 3 cut(s) 78, 217, 566
PspPI GGNCC 6 cut(s) 446, 547, 564, 840, 881, 1041
PspPPI RGGWCCY 1 cut(s) 564
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 1 cut(s) 775
PvuII CAGCTG 1 cut(s) 314
RsaI GTAC 1 cut(s) 791
RsaNI GTAC 1 cut(s) 790
SacI GAGCTC 1 cut(s) 869
SapI GCTCTTC 2 cut(s) 312, 754
SaqAI TTAA 1 cut(s) 351
SatI GCNGC 7 cut(s) 200, 334, 525, 629, 684, 687, 858
Sau3AI GATC 3 cut(s) 56, 490, 775
Sau96I GGNCC 6 cut(s) 446, 547, 564, 840, 881, 1041
ScaI AGTACT 1 cut(s) 791
ScrFI CCNGG 1 cut(s) 854
SduI GDGCHC 3 cut(s) 121, 869, 1012
SfaNI GCATC 1 cut(s) 758
SfcI CTRYAG 1 cut(s) 522
SfuI TTCGAA 1 cut(s) 742
SinI GGWCC 3 cut(s) 564, 840, 1041
SmlI CTYRAG 1 cut(s) 868
SmoI CTYRAG 1 cut(s) 868
Sse9I AATT 1 cut(s) 181
SsiI CCGC 4 cut(s) 94, 200, 333, 857
SspMI CTAG 2 cut(s) 135, 414
SstI GAGCTC 1 cut(s) 869
StyD4I CCNGG 1 cut(s) 852
StyI CCWWGG 2 cut(s) 30, 89
TaaI ACNGT 2 cut(s) 651, 1041
TaqI TCGA 5 cut(s) 39, 83, 327, 742, 982
TasI AATT 1 cut(s) 181
TatI WGTACW 1 cut(s) 789
TauI GCSGC 3 cut(s) 202, 336, 860
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TscAI CASTG 2 cut(s) 930, 1012
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 4 cut(s) 524, 628, 683, 686
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 3 cut(s) 225, 929, 953
TspGWI ACGGA 1 cut(s) 386
TspRI CASTG 2 cut(s) 930, 1012
VneI GTGCAC 2 cut(s) 117, 1008
VpaK11BI GGWCC 3 cut(s) 564, 840, 1041
XcmI CCANNNNNNNNNTGG 2 cut(s) 28, 463
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 2 cut(s) 135, 414
ZrmI AGTACT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.