Auxin-responsive protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25890 |
| fragaria_vesca | FvH4_2g35280 |
| malus_domestica | MD08G1111200.v1.1 MD15G1090600.v1.1 |
| prunus_persica | Prupe.1G445000_v2.0.a1 Prupe.1G445000_v2.0.a1 Prupe.1G445000_v2.0.a1 |
| pyrus_communis | pycom08g09230 |
| rosa_chinensis | RchiOBHm_Chr6g0306631 |
| rosa_laevigata | RLG00000010778 |
| rosa_multiflora | Rmu_sc0005201.1_g000009 |
| rosa_roxburghii | Rroxscaffold_7G00161590 |
| rosa_rugosa | Rorug06G0351200 |
| rosa_samantha | Rh6AG463500 Rh6BG437400 Rh6CG477800 Rh6DG464500 |
| rosa_wichuraiana | Rw6G040390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 855 |
| AclWI | GGATC | 2 cut(s) | 326, 789 |
| AcsI | RAATTY | 2 cut(s) | 493, 513 |
| AcuI | CTGAAG | 3 cut(s) | 60, 330, 881 |
| AfaI | GTAC | 1 cut(s) | 438 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 292, 496 |
| AflIII | ACRYGT | 1 cut(s) | 825 |
| AjnI | CCWGG | 3 cut(s) | 73, 286, 446 |
| Alw21I | GWGCWC | 1 cut(s) | 869 |
| Alw26I | GTCTC | 2 cut(s) | 93, 725 |
| AlwI | GGATC | 2 cut(s) | 326, 789 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 335 |
| AoxI | GGCC | 1 cut(s) | 428 |
| ApeKI | GCWGC | 7 cut(s) | 365, 368, 413, 465, 683, 850, 894 |
| ApoI | RAATTY | 2 cut(s) | 493, 513 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 485, 517 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 591 |
| AspLEI | GCGC | 1 cut(s) | 855 |
| AspS9I | GGNCC | 1 cut(s) | 68 |
| AsuHPI | GGTGA | 2 cut(s) | 495, 821 |
| AsuII | TTCGAA | 1 cut(s) | 482 |
| AvaII | GGWCC | 1 cut(s) | 68 |
| BanII | GRGCYC | 1 cut(s) | 869 |
| BbsI | GAAGAC | 5 cut(s) | 48, 87, 668, 723, 798 |
| Bbv12I | GWGCWC | 1 cut(s) | 869 |
| BbvCI | CCTCAGC | 1 cut(s) | 59 |
| BbvI | GCAGC | 7 cut(s) | 352, 380, 400, 452, 695, 837, 906 |
| BciT130I | CCWGG | 3 cut(s) | 75, 288, 448 |
| BclI | TGATCA | 1 cut(s) | 382 |
| BcoDI | GTCTC | 2 cut(s) | 93, 725 |
| BfmI | CTRYAG | 3 cut(s) | 366, 414, 518 |
| BisI | GCNGC | 7 cut(s) | 366, 369, 414, 466, 684, 851, 895 |
| BlsI | GCNGC | 7 cut(s) | 367, 370, 415, 467, 685, 852, 896 |
| Bme1390I | CCNGG | 3 cut(s) | 75, 288, 448 |
| Bme18I | GGWCC | 1 cut(s) | 68 |
| BmgT120I | GGNCC | 1 cut(s) | 68 |
| BmiI | GGNNCC | 1 cut(s) | 594 |
| BmrFI | CCNGG | 3 cut(s) | 75, 288, 448 |
| BmsI | GCATC | 3 cut(s) | 44, 117, 789 |
| BpiI | GAAGAC | 5 cut(s) | 48, 87, 668, 723, 798 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 629, 661 |
| BpmI | CTGGAG | 4 cut(s) | 57, 74, 309, 417 |
| Bpu10I | CCTNAGC | 2 cut(s) | 59, 240 |
| Bpu14I | TTCGAA | 1 cut(s) | 482 |
| BsaI | GGTCTC | 1 cut(s) | 725 |
| BsaJI | CCNNGG | 3 cut(s) | 286, 670, 818 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 292, 496 |
| Bse1I | ACTGG | 2 cut(s) | 85, 434 |
| Bse3DI | GCAATG | 1 cut(s) | 760 |
| BseBI | CCWGG | 3 cut(s) | 75, 288, 448 |
| BseDI | CCNNGG | 3 cut(s) | 286, 670, 818 |
| BseGI | GGATG | 2 cut(s) | 443, 804 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 292, 496 |
| BseMI | GCAATG | 1 cut(s) | 760 |
| BseMII | CTCAG | 3 cut(s) | 50, 324, 882 |
| BseNI | ACTGG | 2 cut(s) | 85, 434 |
| BseXI | GCAGC | 7 cut(s) | 352, 380, 400, 452, 695, 837, 906 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| Bsh1236I | CGCG | 1 cut(s) | 855 |
| BshFI | GGCC | 1 cut(s) | 430 |
| BsiHKAI | GWGCWC | 1 cut(s) | 869 |
| BslFI | GGGAC | 1 cut(s) | 800 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 292, 496 |
| BsmAI | GTCTC | 2 cut(s) | 93, 725 |
| BsmFI | GGGAC | 1 cut(s) | 800 |
| BsnI | GGCC | 1 cut(s) | 430 |
| Bso31I | GGTCTC | 1 cut(s) | 725 |
| Bsp119I | TTCGAA | 1 cut(s) | 482 |
| Bsp1286I | GDGCHC | 1 cut(s) | 869 |
| Bsp143I | GATC | 4 cut(s) | 331, 382, 576, 781 |
| Bsp19I | CCATGG | 2 cut(s) | 670, 818 |
| BspANI | GGCC | 1 cut(s) | 430 |
| BspCNI | CTCAG | 3 cut(s) | 51, 323, 881 |
| BspFNI | CGCG | 1 cut(s) | 855 |
| BspHI | TCATGA | 2 cut(s) | 133, 784 |
| BspLI | GGNNCC | 1 cut(s) | 594 |
| BspMAI | CTGCAG | 3 cut(s) | 370, 418, 522 |
| BspPI | GGATC | 2 cut(s) | 326, 789 |
| BspQI | GCTCTTC | 1 cut(s) | 857 |
| BspT104I | TTCGAA | 1 cut(s) | 482 |
| BspTNI | GGTCTC | 1 cut(s) | 725 |
| BsrDI | GCAATG | 1 cut(s) | 760 |
| BsrI | ACTGG | 2 cut(s) | 85, 434 |
| BssECI | CCNNGG | 3 cut(s) | 286, 670, 818 |
| BssMI | GATC | 4 cut(s) | 331, 382, 576, 781 |
| BssT1I | CCWWGG | 2 cut(s) | 670, 818 |
| Bst2UI | CCWGG | 3 cut(s) | 75, 288, 448 |
| Bst4CI | ACNGT | 1 cut(s) | 632 |
| Bst6I | CTCTTC | 4 cut(s) | 96, 174, 671, 857 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 225, 413 |
| BstBI | TTCGAA | 1 cut(s) | 482 |
| BstC8I | GCNNGC | 3 cut(s) | 230, 463, 857 |
| BstDEI | CTNAG | 5 cut(s) | 59, 240, 310, 868, 890 |
| BstDSI | CCRYGG | 2 cut(s) | 670, 818 |
| BstF5I | GGATG | 2 cut(s) | 443, 804 |
| BstFNI | CGCG | 1 cut(s) | 855 |
| BstHHI | GCGC | 1 cut(s) | 855 |
| BstKTI | GATC | 4 cut(s) | 334, 385, 579, 784 |
| BstMAI | GTCTC | 2 cut(s) | 93, 725 |
| BstMBI | GATC | 4 cut(s) | 331, 382, 576, 781 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 225, 413, 474, 856 |
| BstNI | CCWGG | 3 cut(s) | 75, 288, 448 |
| BstNSI | RCATGY | 2 cut(s) | 327, 829 |
| BstSCI | CCNGG | 3 cut(s) | 73, 286, 446 |
| BstSFI | CTRYAG | 3 cut(s) | 366, 414, 518 |
| BstUI | CGCG | 1 cut(s) | 855 |
| BstV1I | GCAGC | 7 cut(s) | 352, 380, 400, 452, 695, 837, 906 |
| BstV2I | GAAGAC | 5 cut(s) | 48, 87, 668, 723, 798 |
| BstX2I | RGATCY | 1 cut(s) | 331 |
| BstYI | RGATCY | 1 cut(s) | 331 |
| BsuRI | GGCC | 1 cut(s) | 430 |
| BtgI | CCRYGG | 2 cut(s) | 670, 818 |
| BtsCI | GGATG | 2 cut(s) | 443, 804 |
| BtsI | GCAGTG | 2 cut(s) | 538, 837 |
| BtsIMutI | CAGTG | 4 cut(s) | 230, 263, 538, 837 |
| Cac8I | GCNNGC | 3 cut(s) | 230, 463, 857 |
| CaiI | CAGNNNCTG | 1 cut(s) | 335 |
| CciI | TCATGA | 2 cut(s) | 133, 784 |
| CfoI | GCGC | 1 cut(s) | 855 |
| Cfr13I | GGNCC | 1 cut(s) | 68 |
| Csp6I | GTAC | 1 cut(s) | 437 |
| CviQI | GTAC | 1 cut(s) | 437 |
| DdeI | CTNAG | 5 cut(s) | 59, 240, 310, 868, 890 |
| DpnI | GATC | 4 cut(s) | 333, 384, 578, 783 |
| DpnII | GATC | 4 cut(s) | 331, 382, 576, 781 |
| DraI | TTTAAA | 1 cut(s) | 166 |
| Eam1104I | CTCTTC | 4 cut(s) | 96, 174, 671, 857 |
| EarI | CTCTTC | 4 cut(s) | 96, 174, 671, 857 |
| Ecl136II | GAGCTC | 1 cut(s) | 867 |
| Eco130I | CCWWGG | 2 cut(s) | 670, 818 |
| Eco24I | GRGCYC | 1 cut(s) | 869 |
| Eco31I | GGTCTC | 1 cut(s) | 725 |
| Eco47I | GGWCC | 1 cut(s) | 68 |
| Eco53kI | GAGCTC | 1 cut(s) | 867 |
| Eco57I | CTGAAG | 3 cut(s) | 60, 330, 881 |
| EcoICRI | GAGCTC | 1 cut(s) | 867 |
| EcoRII | CCWGG | 3 cut(s) | 73, 286, 446 |
| EcoT14I | CCWWGG | 2 cut(s) | 670, 818 |
| EcoT38I | GRGCYC | 1 cut(s) | 869 |
| ErhI | CCWWGG | 2 cut(s) | 670, 818 |
| FaqI | GGGAC | 1 cut(s) | 800 |
| FauNDI | CATATG | 1 cut(s) | 564 |
| FbaI | TGATCA | 1 cut(s) | 382 |
| Fnu4HI | GCNGC | 7 cut(s) | 366, 369, 414, 466, 684, 851, 895 |
| FokI | GGATG | 2 cut(s) | 430, 811 |
| FriOI | GRGCYC | 1 cut(s) | 869 |
| Fsp4HI | GCNGC | 7 cut(s) | 366, 369, 414, 466, 684, 851, 895 |
| GlaI | GCGC | 1 cut(s) | 854 |
| GluI | GCNGC | 7 cut(s) | 366, 369, 414, 466, 684, 851, 895 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| GsuI | CTGGAG | 4 cut(s) | 57, 74, 309, 417 |
| HaeIII | GGCC | 1 cut(s) | 430 |
| HhaI | GCGC | 1 cut(s) | 855 |
| Hin6I | GCGC | 1 cut(s) | 853 |
| HinP1I | GCGC | 1 cut(s) | 853 |
| HincII | GTYRAC | 1 cut(s) | 201 |
| HindII | GTYRAC | 1 cut(s) | 201 |
| HindIII | AAGCTT | 1 cut(s) | 475 |
| HinfI | GANTC | 2 cut(s) | 147, 500 |
| HphI | GGTGA | 2 cut(s) | 495, 821 |
| Hpy166II | GTNNAC | 3 cut(s) | 201, 354, 837 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 785 |
| Hpy8I | GTNNAC | 3 cut(s) | 201, 354, 837 |
| HpyAV | CCTTC | 4 cut(s) | 255, 313, 581, 718 |
| HpyCH4III | ACNGT | 1 cut(s) | 632 |
| HpyCH4IV | ACGT | 1 cut(s) | 439 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 225, 413, 474, 856 |
| HpyF3I | CTNAG | 5 cut(s) | 59, 240, 310, 868, 890 |
| HpySE526I | ACGT | 1 cut(s) | 439 |
| HspAI | GCGC | 1 cut(s) | 853 |
| Ksp22I | TGATCA | 1 cut(s) | 382 |
| Kzo9I | GATC | 4 cut(s) | 331, 382, 576, 781 |
| LguI | GCTCTTC | 1 cut(s) | 857 |
| LmnI | GCTCC | 3 cut(s) | 55, 217, 528 |
| Lsp1109I | GCAGC | 7 cut(s) | 352, 380, 400, 452, 695, 837, 906 |
| LweI | GCATC | 3 cut(s) | 44, 117, 789 |
| MaeII | ACGT | 1 cut(s) | 439 |
| MaeIII | GTNAC | 1 cut(s) | 501 |
| MalI | GATC | 4 cut(s) | 333, 384, 578, 783 |
| MboI | GATC | 4 cut(s) | 331, 382, 576, 781 |
| MflI | RGATCY | 1 cut(s) | 331 |
| MhlI | GDGCHC | 1 cut(s) | 869 |
| MluCI | AATT | 4 cut(s) | 402, 493, 513, 550 |
| MlyI | GAGTC | 2 cut(s) | 156, 509 |
| MnlI | CCTC | 8 cut(s) | 54, 81, 181, 441, 517, 570, 626, 772 |
| MroXI | GAANNNNTTC | 1 cut(s) | 591 |
| MseI | TTAA | 1 cut(s) | 165 |
| MslI | CAYNNNNRTG | 2 cut(s) | 753, 830 |
| MspR9I | CCNGG | 3 cut(s) | 75, 288, 448 |
| MvaI | CCWGG | 3 cut(s) | 75, 288, 448 |
| MvnI | CGCG | 1 cut(s) | 855 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 225, 413, 474, 856 |
| NcoI | CCATGG | 2 cut(s) | 670, 818 |
| NdeI | CATATG | 1 cut(s) | 564 |
| NdeII | GATC | 4 cut(s) | 331, 382, 576, 781 |
| NlaIV | GGNNCC | 1 cut(s) | 594 |
| NmuCI | GTSAC | 1 cut(s) | 501 |
| NspI | RCATGY | 2 cut(s) | 327, 829 |
| NspV | TTCGAA | 1 cut(s) | 482 |
| PagI | TCATGA | 2 cut(s) | 133, 784 |
| PciI | ACATGT | 1 cut(s) | 825 |
| PciSI | GCTCTTC | 1 cut(s) | 857 |
| PdmI | GAANNNNTTC | 1 cut(s) | 591 |
| PfoI | TCCNGGA | 2 cut(s) | 73, 446 |
| PkrI | GCNGC | 7 cut(s) | 367, 370, 415, 467, 685, 852, 896 |
| PleI | GAGTC | 2 cut(s) | 155, 508 |
| PpsI | GAGTC | 2 cut(s) | 155, 508 |
| PscI | ACATGT | 1 cut(s) | 825 |
| Psp124BI | GAGCTC | 1 cut(s) | 869 |
| Psp6I | CCWGG | 3 cut(s) | 73, 286, 446 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PspGI | CCWGG | 3 cut(s) | 73, 286, 446 |
| PspN4I | GGNNCC | 1 cut(s) | 594 |
| PspPI | GGNCC | 1 cut(s) | 68 |
| PstI | CTGCAG | 3 cut(s) | 370, 418, 522 |
| PstNI | CAGNNNCTG | 1 cut(s) | 335 |
| PsuI | RGATCY | 1 cut(s) | 331 |
| RsaI | GTAC | 1 cut(s) | 438 |
| RsaNI | GTAC | 1 cut(s) | 437 |
| RseI | CAYNNNNRTG | 2 cut(s) | 753, 830 |
| SacI | GAGCTC | 1 cut(s) | 869 |
| SapI | GCTCTTC | 1 cut(s) | 857 |
| SaqAI | TTAA | 1 cut(s) | 165 |
| SatI | GCNGC | 7 cut(s) | 366, 369, 414, 466, 684, 851, 895 |
| Sau3AI | GATC | 4 cut(s) | 331, 382, 576, 781 |
| Sau96I | GGNCC | 1 cut(s) | 68 |
| SchI | GAGTC | 2 cut(s) | 156, 509 |
| ScrFI | CCNGG | 3 cut(s) | 75, 288, 448 |
| SduI | GDGCHC | 1 cut(s) | 869 |
| SfaNI | GCATC | 3 cut(s) | 44, 117, 789 |
| SfcI | CTRYAG | 3 cut(s) | 366, 414, 518 |
| SfuI | TTCGAA | 1 cut(s) | 482 |
| SinI | GGWCC | 1 cut(s) | 68 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 753, 830 |
| Sse9I | AATT | 4 cut(s) | 402, 493, 513, 550 |
| SspI | AATATT | 1 cut(s) | 127 |
| SstI | GAGCTC | 1 cut(s) | 869 |
| StyD4I | CCNGG | 3 cut(s) | 73, 286, 446 |
| StyI | CCWWGG | 2 cut(s) | 670, 818 |
| TaaI | ACNGT | 1 cut(s) | 632 |
| TaiI | ACGT | 1 cut(s) | 442 |
| TaqI | TCGA | 1 cut(s) | 482 |
| TasI | AATT | 4 cut(s) | 402, 493, 513, 550 |
| Tru1I | TTAA | 1 cut(s) | 165 |
| Tru9I | TTAA | 1 cut(s) | 165 |
| TscAI | CASTG | 4 cut(s) | 230, 263, 538, 844 |
| TseFI | GTSAC | 1 cut(s) | 501 |
| TseI | GCWGC | 7 cut(s) | 365, 368, 413, 465, 683, 850, 894 |
| Tsp45I | GTSAC | 1 cut(s) | 501 |
| TspDTI | ATGAA | 7 cut(s) | 150, 171, 432, 525, 675, 801, 921 |
| TspRI | CASTG | 4 cut(s) | 230, 263, 538, 844 |
| VpaK11BI | GGWCC | 1 cut(s) | 68 |
| XapI | RAATTY | 2 cut(s) | 493, 513 |
| XceI | RCATGY | 2 cut(s) | 327, 829 |
| XmnI | GAANNNNTTC | 1 cut(s) | 591 |