Prupe.1G446900_v2.0.a1

Protein of unknown function (DUF1677)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
37787941 .. 37788596
656 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G446900.1

Sequence Viewer

Length: 516 bp
ATGAATGAGCAAAGGCTTCGAAATGCAATCTCCGATATGTCGAATGAAATAAACAAGTACAAGAAGGAATTGGAAAGTAGCAATGTTGTTGCCAAAATTGATGAAGAGGAGTGCACCGCAGGCTATATCAACGAGGTTGAGGACTCTTTTTCAGGCAAATGGGTTTGCGGGCTTTGTTCAGAAGCTGTCAAAGATAAAATGAAAGAGGTAGCTCCAAATGGTACTGCCATGCAAGAAGCTGTGAGCTCTCACAGGGATTTTTGCCAGAAGTACAACAGCACCAGGCTCAATCCTAAGCTCTCTTTAACTTCTGCCATGAGGGAGATAGCGAGAAGAAGCTCTGAGAATAGAGATTCAAAGCACAACTTGCCAATGTCCAAGCTTGGCCGAAGCAGCAGCTGCGGCCCAAGAATTGATTTCAAGCAATATATGCAACAAAACGACTACTACCTGTCTCACAATATATACTTAGCATATATATATTTGTTGTCAATCAATTTATTTGGTTCATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

172

Amino Acids

19.54

Weight (kDa)

7.6

Isoelectric Point (pI)

59.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25780
fragaria_vesca FvH4_2g35380
malus_domestica MD15G1092000.v1.1
prunus_persica Prupe.1G446900_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0306531
rosa_laevigata RLG00000010788
rosa_multiflora Rmu_sc0002971.1_g000006
rosa_rugosa Rorug06G0350100
rosa_samantha Rh6AG462400 Rh6BG438400 Rh6CG476600 Rh6DG463300
rosa_wichuraiana Rw6G040300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 117, 168, 402
AcoI YGGCCR 1 cut(s) 385
AfaI GTAC 3 cut(s) 59, 223, 272
AgsI TTSAA 2 cut(s) 357, 421
AjnI CCWGG 1 cut(s) 281
AluBI AGCT 8 cut(s) 185, 212, 239, 246, 298, 339, 382, 399
AluI AGCT 8 cut(s) 185, 212, 239, 246, 298, 339, 382, 399
Alw21I GWGCWC 2 cut(s) 116, 248
Alw26I GTCTC 1 cut(s) 459
Alw44I GTGCAC 1 cut(s) 112
AlwNI CAGNNNCTG 2 cut(s) 185, 399
AoxI GGCC 2 cut(s) 385, 403
ApaLI GTGCAC 1 cut(s) 112
ApeKI GCWGC 3 cut(s) 393, 396, 399
AspS9I GGNCC 1 cut(s) 404
AsuII TTCGAA 1 cut(s) 19
BaeGI GKGCMC 1 cut(s) 116
BanII GRGCYC 1 cut(s) 248
Bbv12I GWGCWC 2 cut(s) 116, 248
BbvI GCAGC 3 cut(s) 386, 405, 408
BcgI CGANNNNNNTGC 1 cut(s) 33
BciT130I CCWGG 1 cut(s) 283
BcoDI GTCTC 1 cut(s) 459
BisI GCNGC 4 cut(s) 394, 397, 400, 403
BlsI GCNGC 4 cut(s) 395, 398, 401, 404
Bme1390I CCNGG 1 cut(s) 283
BmgT120I GGNCC 1 cut(s) 404
BmrFI CCNGG 1 cut(s) 283
Bpu10I CCTNAGC 1 cut(s) 294
Bpu14I TTCGAA 1 cut(s) 19
Bse3DI GCAATG 1 cut(s) 88
BseBI CCWGG 1 cut(s) 283
BseMI GCAATG 1 cut(s) 88
BseMII CTCAG 1 cut(s) 333
BseRI GAGGAG 1 cut(s) 122
BseSI GKGCMC 1 cut(s) 116
BseXI GCAGC 3 cut(s) 386, 405, 408
BshFI GGCC 2 cut(s) 387, 405
BsiHKAI GWGCWC 2 cut(s) 116, 248
BsmAI GTCTC 1 cut(s) 459
BsnI GGCC 2 cut(s) 387, 405
Bsp119I TTCGAA 1 cut(s) 19
Bsp1286I GDGCHC 2 cut(s) 116, 248
BspACI CCGC 3 cut(s) 117, 168, 402
BspANI GGCC 2 cut(s) 387, 405
BspCNI CTCAG 1 cut(s) 334
BspT104I TTCGAA 1 cut(s) 19
BsrDI GCAATG 1 cut(s) 88
Bst2UI CCWGG 1 cut(s) 283
Bst6I CTCTTC 1 cut(s) 99
BstAPI GCANNNNNTGC 3 cut(s) 367, 399, 430
BstBI TTCGAA 1 cut(s) 19
BstC8I GCNNGC 2 cut(s) 121, 170
BstDEI CTNAG 3 cut(s) 294, 342, 469
BstMAI GTCTC 1 cut(s) 459
BstMWI GCNNNNNNNGC 6 cut(s) 120, 367, 393, 399, 402, 430
BstNI CCWGG 1 cut(s) 283
BstSCI CCNGG 1 cut(s) 281
BstSLI GKGCMC 1 cut(s) 116
BstV1I GCAGC 3 cut(s) 386, 405, 408
BsuRI GGCC 2 cut(s) 387, 405
Cac8I GCNNGC 2 cut(s) 121, 170
CaiI CAGNNNCTG 2 cut(s) 185, 399
Cfr13I GGNCC 1 cut(s) 404
Csp6I GTAC 3 cut(s) 58, 222, 271
CviAII CATG 2 cut(s) 229, 316
CviQI GTAC 3 cut(s) 58, 222, 271
DdeI CTNAG 3 cut(s) 294, 342, 469
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 1 cut(s) 99
EarI CTCTTC 1 cut(s) 99
Ecl136II GAGCTC 1 cut(s) 246
Eco24I GRGCYC 1 cut(s) 248
Eco53kI GAGCTC 1 cut(s) 246
EcoICRI GAGCTC 1 cut(s) 246
EcoRII CCWGG 1 cut(s) 281
EcoT38I GRGCYC 1 cut(s) 248
FaeI CATG 2 cut(s) 232, 319
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FatI CATG 2 cut(s) 228, 315
FauI CCCGC 1 cut(s) 161
Fnu4HI GCNGC 4 cut(s) 394, 397, 400, 403
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 4 cut(s) 394, 397, 400, 403
GluI GCNGC 4 cut(s) 394, 397, 400, 403
HaeIII GGCC 2 cut(s) 387, 405
Hin1II CATG 2 cut(s) 232, 319
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 2 cut(s) 143, 353
Hpy166II GTNNAC 1 cut(s) 114
Hpy188I TCNGA 3 cut(s) 34, 181, 343
Hpy8I GTNNAC 1 cut(s) 114
HpyAV CCTTC 1 cut(s) 58
HpyCH4V TGCA 4 cut(s) 26, 114, 232, 433
HpyF10VI GCNNNNNNNGC 6 cut(s) 120, 367, 393, 399, 402, 430
HpyF3I CTNAG 3 cut(s) 294, 342, 469
Hsp92II CATG 2 cut(s) 232, 319
LmnI GCTCC 1 cut(s) 217
LpnPI CCDG 7 cut(s) 105, 138, 238, 268, 278, 295, 464
Lsp1109I GCAGC 3 cut(s) 386, 405, 408
MboII GAAGA 2 cut(s) 116, 345
MhlI GDGCHC 2 cut(s) 116, 248
MluCI AATT 4 cut(s) 68, 96, 411, 496
MlyI GAGTC 1 cut(s) 137
MnlI CCTC 5 cut(s) 100, 127, 133, 199, 312
MseI TTAA 1 cut(s) 305
MspA1I CMGCKG 1 cut(s) 399
MspR9I CCNGG 1 cut(s) 283
MvaI CCWGG 1 cut(s) 283
MwoI GCNNNNNNNGC 6 cut(s) 120, 367, 393, 399, 402, 430
NlaIII CATG 2 cut(s) 232, 319
NspV TTCGAA 1 cut(s) 19
PfeI GAWTC 1 cut(s) 353
PkrI GCNGC 4 cut(s) 395, 398, 401, 404
PleI GAGTC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 137
Psp124BI GAGCTC 1 cut(s) 248
Psp6I CCWGG 1 cut(s) 281
PspGI CCWGG 1 cut(s) 281
PspPI GGNCC 1 cut(s) 404
PstNI CAGNNNCTG 2 cut(s) 185, 399
PvuII CAGCTG 1 cut(s) 399
RsaI GTAC 3 cut(s) 59, 223, 272
RsaNI GTAC 3 cut(s) 58, 222, 271
SacI GAGCTC 1 cut(s) 248
SaqAI TTAA 1 cut(s) 305
SatI GCNGC 4 cut(s) 394, 397, 400, 403
Sau96I GGNCC 1 cut(s) 404
SchI GAGTC 1 cut(s) 137
ScrFI CCNGG 1 cut(s) 283
SduI GDGCHC 2 cut(s) 116, 248
SfuI TTCGAA 1 cut(s) 19
Sse9I AATT 4 cut(s) 68, 96, 411, 496
SsiI CCGC 3 cut(s) 117, 168, 402
SstI GAGCTC 1 cut(s) 248
StyD4I CCNGG 1 cut(s) 281
TaqI TCGA 2 cut(s) 19, 41
TasI AATT 4 cut(s) 68, 96, 411, 496
TatI WGTACW 2 cut(s) 57, 270
TauI GCSGC 1 cut(s) 405
TfiI GAWTC 1 cut(s) 353
Tru1I TTAA 1 cut(s) 305
Tru9I TTAA 1 cut(s) 305
TseI GCWGC 3 cut(s) 393, 396, 399
TspDTI ATGAA 5 cut(s) 17, 60, 117, 215, 498
VneI GTGCAC 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.